RNA–Protein interactions for RNA: ENST00000522012.5

R3HCC1-208, Transcript of R3H domain and coiled-coil containing 1, humanhuman

TSL 1 (best)

Gene R3HCC1, Length 1,500 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-208ENST00000522012 Q96MT0 163 aa19.1■□□□□ 0.65
R3HCC1-208ENST00000522012 PLSCR2Q9NRY7 297 aa19.1■□□□□ 0.65
R3HCC1-208ENST00000522012 PAQR5Q9NXK6 330 aaPredicted RBP19.1■□□□□ 0.65
R3HCC1-208ENST00000522012 PKD1L2Q7Z442 2459 aa19.09■□□□□ 0.65
R3HCC1-208ENST00000522012 A0A1B0GTH9 108 aa19.09■□□□□ 0.65
R3HCC1-208ENST00000522012 FAM183AA6NL82 134 aa19.09■□□□□ 0.65
R3HCC1-208ENST00000522012 ZNHIT1O43257 154 aa19.09■□□□□ 0.65
R3HCC1-208ENST00000522012 ENTPD6O75354 484 aa19.09■□□□□ 0.65
R3HCC1-208ENST00000522012 BCL10O95999 233 aa19.09■□□□□ 0.65
R3HCC1-208ENST00000522012 IGHMP01871 453 aa19.09■□□□□ 0.65
R3HCC1-208ENST00000522012 ZNF43P17038 809 aa19.09■□□□□ 0.65
R3HCC1-208ENST00000522012 ACVR1BP36896 505 aa19.09■□□□□ 0.65
R3HCC1-208ENST00000522012 DAP3P51398 398 aaKnown RBP19.09■□□□□ 0.65
R3HCC1-208ENST00000522012 ITGADQ13349 1161 aa19.09■□□□□ 0.65
R3HCC1-208ENST00000522012 KRR1Q13601 381 aaKnown RBP19.09■□□□□ 0.65
R3HCC1-208ENST00000522012 CRMP1Q14194 572 aa19.09■□□□□ 0.65
R3HCC1-208ENST00000522012 PLBD1Q6P4A8 553 aa19.09■□□□□ 0.65
R3HCC1-208ENST00000522012 CXXC5Q7LFL8 322 aaKnown RBP19.09■□□□□ 0.65
R3HCC1-208ENST00000522012 CPOQ8IVL8 374 aa19.09■□□□□ 0.65
R3HCC1-208ENST00000522012 ARIH2OSQ8N7S6 290 aa19.09■□□□□ 0.65
R3HCC1-208ENST00000522012 CYB561A3Q8NBI2 242 aa19.09■□□□□ 0.65
R3HCC1-208ENST00000522012 SLC37A3Q8NCC5 494 aa19.09■□□□□ 0.65
R3HCC1-208ENST00000522012 NMNAT3Q96T66 252 aa19.09■□□□□ 0.65
R3HCC1-208ENST00000522012 SLC25A18Q9H1K4 315 aa19.09■□□□□ 0.65
R3HCC1-208ENST00000522012 MYRFQ9Y2G1 1151 aa19.09■□□□□ 0.65
R3HCC1-208ENST00000522012 PTPRQQ9UMZ3 2332 aa19.09■□□□□ 0.65
R3HCC1-208ENST00000522012 LOC102725191A0A1B0GVB3 256 aa19.08■□□□□ 0.64
R3HCC1-208ENST00000522012 PRR23D1E9PI22 279 aaPredicted RBP19.08■□□□□ 0.64
R3HCC1-208ENST00000522012 NPIPA2E9PIF3 369 aa19.08■□□□□ 0.64
R3HCC1-208ENST00000522012 NPIPA3F8WFD2 350 aa19.08■□□□□ 0.64
R3HCC1-208ENST00000522012 XKRYO14609 159 aa19.08■□□□□ 0.64
R3HCC1-208ENST00000522012 VAMP5O95183 116 aa19.08■□□□□ 0.64
R3HCC1-208ENST00000522012 PRR23D2P0DMB1 279 aaPredicted RBP19.08■□□□□ 0.64
R3HCC1-208ENST00000522012 PAICSP22234 425 aaKnown RBP19.08■□□□□ 0.64
R3HCC1-208ENST00000522012 OCLNQ16625 522 aa19.08■□□□□ 0.64
R3HCC1-208ENST00000522012 MESTQ5EB52 335 aa19.08■□□□□ 0.64
R3HCC1-208ENST00000522012 RBM48Q5RL73 367 aaKnown RBP19.08■□□□□ 0.64
R3HCC1-208ENST00000522012 LEG1Q6P5S2 330 aa19.08■□□□□ 0.64
R3HCC1-208ENST00000522012 SARAFQ96BY9 339 aa19.08■□□□□ 0.64
R3HCC1-208ENST00000522012 TXNDC15Q96J42 360 aa19.08■□□□□ 0.64
R3HCC1-208ENST00000522012 GPR137Q96N19 417 aa19.08■□□□□ 0.64
R3HCC1-208ENST00000522012 ZNF582Q96NG8 517 aaPredicted RBP19.08■□□□□ 0.64
R3HCC1-208ENST00000522012 FN3KQ9H479 309 aa19.08■□□□□ 0.64
R3HCC1-208ENST00000522012 MED20Q9H944 212 aa19.08■□□□□ 0.64
R3HCC1-208ENST00000522012 HINT3Q9NQE9 182 aaKnown RBP19.08■□□□□ 0.64
R3HCC1-208ENST00000522012 MED29Q9NX70 200 aa19.08■□□□□ 0.64
R3HCC1-208ENST00000522012 H2AFY2Q9P0M6 372 aaPredicted RBP19.08■□□□□ 0.64
R3HCC1-208ENST00000522012 ARHGEF9O43307 516 aa19.07■□□□□ 0.64
R3HCC1-208ENST00000522012 XPNPEP2O43895 674 aa19.07■□□□□ 0.64
R3HCC1-208ENST00000522012 FAM20BO75063 409 aa19.07■□□□□ 0.64
R3HCC1-208ENST00000522012 CDKN2AP42771 156 aaKnown RBP19.07■□□□□ 0.64
R3HCC1-208ENST00000522012 NUDT6P53370 316 aa19.07■□□□□ 0.64
R3HCC1-208ENST00000522012 TEKQ02763 1124 aa19.07■□□□□ 0.64
R3HCC1-208ENST00000522012 PON3Q15166 354 aa19.07■□□□□ 0.64
R3HCC1-208ENST00000522012 TMEM201Q5SNT2 666 aa19.07■□□□□ 0.64
R3HCC1-208ENST00000522012 SLC25A30Q5SVS4 291 aa19.07■□□□□ 0.64
R3HCC1-208ENST00000522012 MEDAGQ5VYS4 303 aa19.07■□□□□ 0.64
R3HCC1-208ENST00000522012 FCRLAQ7L513 359 aa19.07■□□□□ 0.64
R3HCC1-208ENST00000522012 NPEPL1Q8NDH3 523 aa19.07■□□□□ 0.64
R3HCC1-208ENST00000522012 ZNF519Q8TB69 540 aa19.07■□□□□ 0.64
R3HCC1-208ENST00000522012 YTHDF1Q9BYJ9 559 aaKnown RBP19.07■□□□□ 0.64
R3HCC1-208ENST00000522012 PRRG4Q9BZD6 226 aa19.07■□□□□ 0.64
R3HCC1-208ENST00000522012 AMBNQ9NP70 447 aa19.07■□□□□ 0.64
R3HCC1-208ENST00000522012 MCTS1Q9ULC4 181 aaKnown RBP19.07■□□□□ 0.64
R3HCC1-208ENST00000522012 LAMA5O15230 3695 aa19.07■□□□□ 0.64
R3HCC1-208ENST00000522012 SH3D21A4FU49 640 aa19.06■□□□□ 0.64
R3HCC1-208ENST00000522012 SLC1A7O00341 560 aa19.06■□□□□ 0.64
R3HCC1-208ENST00000522012 TNFAIP8O95379 198 aa19.06■□□□□ 0.64
R3HCC1-208ENST00000522012 SFTPCP11686 197 aa19.06■□□□□ 0.64
R3HCC1-208ENST00000522012 BIDP55957 195 aa19.06■□□□□ 0.64
R3HCC1-208ENST00000522012 CXCR4P61073 352 aa19.06■□□□□ 0.64
R3HCC1-208ENST00000522012 SLC17A1Q14916 467 aa19.06■□□□□ 0.64
R3HCC1-208ENST00000522012 ARMC4Q5T2S8 1044 aa19.06■□□□□ 0.64
R3HCC1-208ENST00000522012 EEF1A1P5Q5VTE0 462 aa19.06■□□□□ 0.64
R3HCC1-208ENST00000522012 PLXDC2Q6UX71 529 aa19.06■□□□□ 0.64
R3HCC1-208ENST00000522012 NHLRC1Q6VVB1 395 aa19.06■□□□□ 0.64
R3HCC1-208ENST00000522012 BBS1Q8NFJ9 593 aa19.06■□□□□ 0.64
R3HCC1-208ENST00000522012 OR9K2Q8NGE7 335 aa19.06■□□□□ 0.64
R3HCC1-208ENST00000522012 ASB10Q8WXI3 467 aa19.06■□□□□ 0.64
R3HCC1-208ENST00000522012 PTP4A1Q93096 173 aa19.06■□□□□ 0.64
R3HCC1-208ENST00000522012 TUBA1CQ9BQE3 449 aa19.06■□□□□ 0.64
R3HCC1-208ENST00000522012 EMC6Q9BV81 110 aa19.06■□□□□ 0.64
R3HCC1-208ENST00000522012 SF3B5Q9BWJ5 86 aaKnown RBP19.06■□□□□ 0.64
R3HCC1-208ENST00000522012 HCAR1Q9BXC0 346 aa19.06■□□□□ 0.64
R3HCC1-208ENST00000522012 PRDM14Q9GZV8 571 aa19.06■□□□□ 0.64
R3HCC1-208ENST00000522012 SCN3BQ9NY72 215 aa19.06■□□□□ 0.64
R3HCC1-208ENST00000522012 A6NIZ1 184 aa19.05■□□□□ 0.64
R3HCC1-208ENST00000522012 NPIPB13A6NJU9 1138 aa19.05■□□□□ 0.64
R3HCC1-208ENST00000522012 KDM4EB2RXH2 506 aaPredicted RBP19.05■□□□□ 0.64
R3HCC1-208ENST00000522012 NPIPB4C9JG80 1138 aa19.05■□□□□ 0.64
R3HCC1-208ENST00000522012 H7C1C5 153 aa19.05■□□□□ 0.64
R3HCC1-208ENST00000522012 TRAF3IP2O43734 574 aaPredicted RBP19.05■□□□□ 0.64
R3HCC1-208ENST00000522012 LYNP07948 512 aa19.05■□□□□ 0.64
R3HCC1-208ENST00000522012 RAP1BP61224 184 aa19.05■□□□□ 0.64
R3HCC1-208ENST00000522012 LCN6P62502 163 aa19.05■□□□□ 0.64
R3HCC1-208ENST00000522012 RAP1AP62834 184 aa19.05■□□□□ 0.64
R3HCC1-208ENST00000522012 CSNK2BP67870 215 aa19.05■□□□□ 0.64
R3HCC1-208ENST00000522012 KLRB1Q12918 225 aa19.05■□□□□ 0.64
R3HCC1-208ENST00000522012 POU4F3Q15319 338 aa19.05■□□□□ 0.64
R3HCC1-208ENST00000522012 KRTCAP3Q53RY4 240 aa19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms