RNA–Protein interactions for RNA: ENST00000521559.1

VPS13B-209, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 466 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-209ENST00000521559 ZNF780BQ9Y6R6 833 aa2.83□□□□□ -1.96
VPS13B-209ENST00000521559 TMEM131Q92545 1883 aa2.83□□□□□ -1.96
VPS13B-209ENST00000521559 PCNX2A6NKB5 2137 aa2.83□□□□□ -1.96
VPS13B-209ENST00000521559 PIEZO1Q92508 2521 aa2.82□□□□□ -1.96
VPS13B-209ENST00000521559 IGHV1-45A0A0A0MS14 117 aa2.82□□□□□ -1.96
VPS13B-209ENST00000521559 NSG1A0A0A6YYJ2 146 aa2.82□□□□□ -1.96
VPS13B-209ENST00000521559 IGHV3-20A0A0C4DH32 117 aa2.82□□□□□ -1.96
VPS13B-209ENST00000521559 A0A0G2JND7 137 aa2.82□□□□□ -1.96
VPS13B-209ENST00000521559 A8MUA0 341 aa2.82□□□□□ -1.96
VPS13B-209ENST00000521559 C17orf105B2RV13 164 aa2.82□□□□□ -1.96
VPS13B-209ENST00000521559 PLOD2O00469 737 aa2.82□□□□□ -1.96
VPS13B-209ENST00000521559 SCAMP2O15127 329 aaKnown RBP2.82□□□□□ -1.96
VPS13B-209ENST00000521559 OR10H2O60403 315 aa2.82□□□□□ -1.96
VPS13B-209ENST00000521559 GPR137BO60478 399 aa2.82□□□□□ -1.96
VPS13B-209ENST00000521559 SNX3O60493 162 aa2.82□□□□□ -1.96
VPS13B-209ENST00000521559 KLHL41O60662 606 aa2.82□□□□□ -1.96
VPS13B-209ENST00000521559 PRKRAO75569 313 aaKnown RBP2.82□□□□□ -1.96
VPS13B-209ENST00000521559 LRATO95237 230 aa2.82□□□□□ -1.96
VPS13B-209ENST00000521559 HPP00738 406 aa2.82□□□□□ -1.96
VPS13B-209ENST00000521559 TSHBP01222 138 aa2.82□□□□□ -1.96
VPS13B-209ENST00000521559 IFNA16P05015 189 aa2.82□□□□□ -1.96
VPS13B-209ENST00000521559 ATP1B1P05026 303 aa2.82□□□□□ -1.96
VPS13B-209ENST00000521559 SERPINA7P05543 415 aa2.82□□□□□ -1.96
VPS13B-209ENST00000521559 ABCB1P08183 1280 aaPredicted RBP2.82□□□□□ -1.96
VPS13B-209ENST00000521559 IFI6P09912 130 aa2.82□□□□□ -1.96
VPS13B-209ENST00000521559 LAMP1P11279 417 aa2.82□□□□□ -1.96
VPS13B-209ENST00000521559 COX6A1P12074 109 aa2.82□□□□□ -1.96
VPS13B-209ENST00000521559 IDO1P14902 403 aa2.82□□□□□ -1.96
VPS13B-209ENST00000521559 NT5EP21589 574 aa2.82□□□□□ -1.96
VPS13B-209ENST00000521559 GPX3P22352 226 aa2.82□□□□□ -1.96
VPS13B-209ENST00000521559 ITGA3P26006 1051 aa2.82□□□□□ -1.96
VPS13B-209ENST00000521559 S100A3P33764 101 aa2.82□□□□□ -1.96
VPS13B-209ENST00000521559 MPIP34949 423 aa2.82□□□□□ -1.96
VPS13B-209ENST00000521559 HPCAL1P37235 193 aa2.82□□□□□ -1.96
VPS13B-209ENST00000521559 FEN1P39748 380 aaKnown RBP2.82□□□□□ -1.96
VPS13B-209ENST00000521559 FRKP42685 505 aaPredicted RBP2.82□□□□□ -1.96
VPS13B-209ENST00000521559 ATP4BP51164 291 aa2.82□□□□□ -1.96
VPS13B-209ENST00000521559 SLC26A5P58743 744 aa2.82□□□□□ -1.96
VPS13B-209ENST00000521559 FUT7Q11130 342 aa2.82□□□□□ -1.96
VPS13B-209ENST00000521559 PDE7AQ13946 482 aa2.82□□□□□ -1.96
VPS13B-209ENST00000521559 SQLEQ14534 574 aa2.82□□□□□ -1.96
VPS13B-209ENST00000521559 CEBPEQ15744 281 aa2.82□□□□□ -1.96
VPS13B-209ENST00000521559 EXT1Q16394 746 aa2.82□□□□□ -1.96
VPS13B-209ENST00000521559 DEFB109BQ30KR1 87 aa2.82□□□□□ -1.96
VPS13B-209ENST00000521559 ZFP69Q49AA0 526 aa2.82□□□□□ -1.96
VPS13B-209ENST00000521559 FAM98BQ52LJ0 330 aaKnown RBP2.82□□□□□ -1.96
VPS13B-209ENST00000521559 DCAF10Q5QP82 559 aa2.82□□□□□ -1.96
VPS13B-209ENST00000521559 GCNT6Q5T4J0 391 aa2.82□□□□□ -1.96
VPS13B-209ENST00000521559 LCE1FQ5T754 118 aa2.82□□□□□ -1.96
VPS13B-209ENST00000521559 CPTPQ5TA50 214 aa2.82□□□□□ -1.96
VPS13B-209ENST00000521559 ATP1A1-AS1Q5TC04 95 aa2.82□□□□□ -1.96
VPS13B-209ENST00000521559 ANXA8L1Q5VT79 327 aa2.82□□□□□ -1.96
VPS13B-209ENST00000521559 CGB2Q6NT52 195 aa2.82□□□□□ -1.96
VPS13B-209ENST00000521559 ZNF497Q6ZNH5 498 aa2.82□□□□□ -1.96
VPS13B-209ENST00000521559 LANCL3Q6ZV70 420 aa2.82□□□□□ -1.96
VPS13B-209ENST00000521559 NOTCH2NLQ7Z3S9 236 aa2.82□□□□□ -1.96
VPS13B-209ENST00000521559 CAMKMTQ7Z624 323 aa2.82□□□□□ -1.96
VPS13B-209ENST00000521559 PIGWQ7Z7B1 504 aa2.82□□□□□ -1.96
VPS13B-209ENST00000521559 PTOV1Q86YD1 416 aa2.82□□□□□ -1.96
VPS13B-209ENST00000521559 KRTAP7-1Q8IUC3 87 aa2.82□□□□□ -1.96
VPS13B-209ENST00000521559 GPALPP1Q8IXQ4 340 aa2.82□□□□□ -1.96
VPS13B-209ENST00000521559 ST13P4Q8IZP2 240 aaPredicted RBP2.82□□□□□ -1.96
VPS13B-209ENST00000521559 CPSF7Q8N684 471 aaKnown RBP2.82□□□□□ -1.96
VPS13B-209ENST00000521559 KRTCAP2Q8N6L1 136 aa2.82□□□□□ -1.96
VPS13B-209ENST00000521559 MORN4Q8NDC4 146 aa2.82□□□□□ -1.96
VPS13B-209ENST00000521559 NFAM1Q8NET5 270 aaPredicted RBP2.82□□□□□ -1.96
VPS13B-209ENST00000521559 OR7G1Q8NGA0 311 aa2.82□□□□□ -1.96
VPS13B-209ENST00000521559 OR7A2PQ8NGA2 310 aa2.82□□□□□ -1.96
VPS13B-209ENST00000521559 CLHC1Q8NHS4 586 aa2.82□□□□□ -1.96
VPS13B-209ENST00000521559 CDC26Q8NHZ8 85 aa2.82□□□□□ -1.96
VPS13B-209ENST00000521559 M1APQ8TC57 530 aa2.82□□□□□ -1.96
VPS13B-209ENST00000521559 ZNF675Q8TD23 568 aa2.82□□□□□ -1.96
VPS13B-209ENST00000521559 PTPMT1Q8WUK0 201 aaPredicted RBP2.82□□□□□ -1.96
VPS13B-209ENST00000521559 C10orf82Q8WW14 230 aa2.82□□□□□ -1.96
VPS13B-209ENST00000521559 APOBEC4Q8WW27 367 aaKnown RBP2.82□□□□□ -1.96
VPS13B-209ENST00000521559 OR5P2Q8WZ92 322 aa2.82□□□□□ -1.96
VPS13B-209ENST00000521559 DAZLQ92904 295 aaKnown RBP2.82□□□□□ -1.96
VPS13B-209ENST00000521559 RIT1Q92963 219 aa2.82□□□□□ -1.96
VPS13B-209ENST00000521559 EXOSC8Q96B26 276 aaKnown RBP2.82□□□□□ -1.96
VPS13B-209ENST00000521559 PPWD1Q96BP3 646 aaKnown RBP2.82□□□□□ -1.96
VPS13B-209ENST00000521559 TESCQ96BS2 214 aa2.82□□□□□ -1.96
VPS13B-209ENST00000521559 C8orf44Q96CB5 159 aa2.82□□□□□ -1.96
VPS13B-209ENST00000521559 CNRIP1Q96F85 164 aaPredicted RBP2.82□□□□□ -1.96
VPS13B-209ENST00000521559 SENP5Q96HI0 755 aaPredicted RBP2.82□□□□□ -1.96
VPS13B-209ENST00000521559 RADILQ96JH8 1075 aa2.82□□□□□ -1.96
VPS13B-209ENST00000521559 ART5Q96L15 291 aa2.82□□□□□ -1.96
VPS13B-209ENST00000521559 LINC00479Q96M42 142 aa2.82□□□□□ -1.96
VPS13B-209ENST00000521559 RILPQ96NA2 401 aa2.82□□□□□ -1.96
VPS13B-209ENST00000521559 AMDHD1Q96NU7 426 aa2.82□□□□□ -1.96
VPS13B-209ENST00000521559 DGAT2Q96PD7 388 aa2.82□□□□□ -1.96
VPS13B-209ENST00000521559 ZBTB18Q99592 522 aa2.82□□□□□ -1.96
VPS13B-209ENST00000521559 LPAR4Q99677 370 aa2.82□□□□□ -1.96
VPS13B-209ENST00000521559 OPRPNQ99935 248 aaPredicted RBP2.82□□□□□ -1.96
VPS13B-209ENST00000521559 SLX1AQ9BQ83 275 aa2.82□□□□□ -1.96
VPS13B-209ENST00000521559 EBF4Q9BQW3 602 aa2.82□□□□□ -1.96
VPS13B-209ENST00000521559 CCDC106Q9BWC9 280 aa2.82□□□□□ -1.96
VPS13B-209ENST00000521559 DPY30Q9C005 99 aa2.82□□□□□ -1.96
VPS13B-209ENST00000521559 NSRP1Q9H0G5 558 aaKnown RBP2.82□□□□□ -1.96
VPS13B-209ENST00000521559 ING2Q9H160 280 aa2.82□□□□□ -1.96
VPS13B-209ENST00000521559 SEMA6AQ9H2E6 1030 aa2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms