RNA–Protein interactions for RNA: ENST00000519553.1

PTPN12-213, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-213ENST00000519553 SLC41A3Q96GZ6 507 aa3.6□□□□□ -1.83
PTPN12-213ENST00000519553 RPRD1AQ96P16 312 aaPredicted RBP3.6□□□□□ -1.83
PTPN12-213ENST00000519553 COPS8Q99627 209 aa3.6□□□□□ -1.83
PTPN12-213ENST00000519553 MCCC2Q9HCC0 563 aa3.6□□□□□ -1.83
PTPN12-213ENST00000519553 SPATA7Q9P0W8 599 aa3.6□□□□□ -1.83
PTPN12-213ENST00000519553 C15orf38-AP3S2A0A0A6YYH1 394 aa3.59□□□□□ -1.83
PTPN12-213ENST00000519553 CD5LO43866 347 aa3.59□□□□□ -1.83
PTPN12-213ENST00000519553 B4GALT2O60909 372 aa3.59□□□□□ -1.83
PTPN12-213ENST00000519553 CLDN9O95484 217 aa3.59□□□□□ -1.83
PTPN12-213ENST00000519553 HPGDP15428 266 aa3.59□□□□□ -1.83
PTPN12-213ENST00000519553 GPM6BQ13491 265 aa3.59□□□□□ -1.83
PTPN12-213ENST00000519553 TMEM183BQ1AE95 376 aa3.59□□□□□ -1.83
PTPN12-213ENST00000519553 LYPD2Q6UXB3 125 aa3.59□□□□□ -1.83
PTPN12-213ENST00000519553 TMEM183AQ8IXX5 376 aa3.59□□□□□ -1.83
PTPN12-213ENST00000519553 LRRC75A-AS1Q8N1F1 130 aa3.59□□□□□ -1.83
PTPN12-213ENST00000519553 ZADH2Q8N4Q0 377 aa3.59□□□□□ -1.83
PTPN12-213ENST00000519553 TRPV1Q8NER1 839 aa3.59□□□□□ -1.83
PTPN12-213ENST00000519553 OR1N2Q8NGR9 330 aa3.59□□□□□ -1.83
PTPN12-213ENST00000519553 OR2G3Q8NGZ4 309 aa3.59□□□□□ -1.83
PTPN12-213ENST00000519553 PYROXD1Q8WU10 500 aa3.59□□□□□ -1.83
PTPN12-213ENST00000519553 ZNF641Q96N77 438 aaPredicted RBP3.59□□□□□ -1.83
PTPN12-213ENST00000519553 TAAR1Q96RJ0 339 aa3.59□□□□□ -1.83
PTPN12-213ENST00000519553 LHX9Q9NQ69 397 aa3.59□□□□□ -1.83
PTPN12-213ENST00000519553 LRP4O75096 1905 aa3.58□□□□□ -1.84
PTPN12-213ENST00000519553 CCDC182A6NF36 153 aa3.58□□□□□ -1.84
PTPN12-213ENST00000519553 ZNF208O43345 1280 aa3.58□□□□□ -1.84
PTPN12-213ENST00000519553 FCMRO60667 390 aa3.58□□□□□ -1.84
PTPN12-213ENST00000519553 GKN3PP0CG01 181 aa3.58□□□□□ -1.84
PTPN12-213ENST00000519553 IGHV3-43DP0DP04 118 aa3.58□□□□□ -1.84
PTPN12-213ENST00000519553 NPBWR2P48146 333 aa3.58□□□□□ -1.84
PTPN12-213ENST00000519553 ERVK-25P63136 954 aa3.58□□□□□ -1.84
PTPN12-213ENST00000519553 NCBP1Q09161 790 aaKnown RBP3.58□□□□□ -1.84
PTPN12-213ENST00000519553 SCRN3Q0VDG4 424 aa3.58□□□□□ -1.84
PTPN12-213ENST00000519553 IL24Q13007 206 aa3.58□□□□□ -1.84
PTPN12-213ENST00000519553 PLA2G4DQ86XP0 818 aa3.58□□□□□ -1.84
PTPN12-213ENST00000519553 FAM83FQ8NEG4 500 aaPredicted RBP3.58□□□□□ -1.84
PTPN12-213ENST00000519553 STARD8Q92502 1023 aa3.58□□□□□ -1.84
PTPN12-213ENST00000519553 TBRG4Q969Z0 631 aaKnown RBP eCLIP3.58□□□□□ -1.84
PTPN12-213ENST00000519553 TRIM62Q9BVG3 475 aa3.58□□□□□ -1.84
PTPN12-213ENST00000519553 SLCO1B3Q9NPD5 702 aa3.58□□□□□ -1.84
PTPN12-213ENST00000519553 CYTL1Q9NRR1 136 aa3.58□□□□□ -1.84
PTPN12-213ENST00000519553 F11RQ9Y624 299 aaKnown RBP3.58□□□□□ -1.84
PTPN12-213ENST00000519553 PLAC8L1A1L4L8 177 aa3.57□□□□□ -1.84
PTPN12-213ENST00000519553 SNTNA6NMZ2 147 aa3.57□□□□□ -1.84
PTPN12-213ENST00000519553 TIMM8AO60220 97 aaPredicted RBP3.57□□□□□ -1.84
PTPN12-213ENST00000519553 TOM1O60784 492 aa3.57□□□□□ -1.84
PTPN12-213ENST00000519553 CSF3P09919 207 aa3.57□□□□□ -1.84
PTPN12-213ENST00000519553 LONP1P36776 959 aaKnown RBP3.57□□□□□ -1.84
PTPN12-213ENST00000519553 RPS9P46781 194 aaKnown RBP3.57□□□□□ -1.84
PTPN12-213ENST00000519553 HNMTP50135 292 aa3.57□□□□□ -1.84
PTPN12-213ENST00000519553 ZNF136P52737 540 aa3.57□□□□□ -1.84
PTPN12-213ENST00000519553 GBX2P52951 348 aaPredicted RBP3.57□□□□□ -1.84
PTPN12-213ENST00000519553 ACTA1P68133 377 aa3.57□□□□□ -1.84
PTPN12-213ENST00000519553 EIF4EBP1Q13541 118 aaPredicted RBP3.57□□□□□ -1.84
PTPN12-213ENST00000519553 GNMTQ14749 295 aa3.57□□□□□ -1.84
PTPN12-213ENST00000519553 CCDC54Q8NEL0 328 aa3.57□□□□□ -1.84
PTPN12-213ENST00000519553 PSKH2Q96QS6 385 aa3.57□□□□□ -1.84
PTPN12-213ENST00000519553 RIOK1Q9BRS2 568 aaKnown RBP3.57□□□□□ -1.84
PTPN12-213ENST00000519553 NIPAL2Q9H841 368 aa3.57□□□□□ -1.84
PTPN12-213ENST00000519553 PCYOX1Q9UHG3 505 aa3.57□□□□□ -1.84
PTPN12-213ENST00000519553 ZNF30P17039 623 aa3.56□□□□□ -1.84
PTPN12-213ENST00000519553 CNR1P21554 472 aa3.56□□□□□ -1.84
PTPN12-213ENST00000519553 ARFIP1P53367 373 aa3.56□□□□□ -1.84
PTPN12-213ENST00000519553 SMARCB1Q12824 385 aa3.56□□□□□ -1.84
PTPN12-213ENST00000519553 C16orf72Q14CZ0 275 aa3.56□□□□□ -1.84
PTPN12-213ENST00000519553 DEFB116Q30KQ4 102 aa3.56□□□□□ -1.84
PTPN12-213ENST00000519553 PMF1Q6P1K2 205 aa3.56□□□□□ -1.84
PTPN12-213ENST00000519553 PPP1R42Q7Z4L9 355 aa3.56□□□□□ -1.84
PTPN12-213ENST00000519553 TPRX1Q8N7U7 411 aa3.56□□□□□ -1.84
PTPN12-213ENST00000519553 Q8N976 141 aa3.56□□□□□ -1.84
PTPN12-213ENST00000519553 AURKBQ96GD4 344 aaPredicted RBP3.56□□□□□ -1.84
PTPN12-213ENST00000519553 MS4A4EQ96PG1 132 aa3.56□□□□□ -1.84
PTPN12-213ENST00000519553 PPA2Q9H2U2 334 aa3.56□□□□□ -1.84
PTPN12-213ENST00000519553 VCX2Q9H322 139 aa3.56□□□□□ -1.84
PTPN12-213ENST00000519553 UGT1A7Q9HAW7 530 aa3.56□□□□□ -1.84
PTPN12-213ENST00000519553 UGT1A10Q9HAW8 530 aa3.56□□□□□ -1.84
PTPN12-213ENST00000519553 UGT1A8Q9HAW9 530 aa3.56□□□□□ -1.84
PTPN12-213ENST00000519553 NMRAL1Q9HBL8 299 aa3.56□□□□□ -1.84
PTPN12-213ENST00000519553 ADAP2Q9NPF8 381 aa3.56□□□□□ -1.84
PTPN12-213ENST00000519553 CTPS2Q9NRF8 586 aa3.56□□□□□ -1.84
PTPN12-213ENST00000519553 NECAP2Q9NVZ3 263 aa3.56□□□□□ -1.84
PTPN12-213ENST00000519553 CLEC4AQ9UMR7 237 aa3.56□□□□□ -1.84
PTPN12-213ENST00000519553 IGLV11-55A0A075B6I3 123 aa3.55□□□□□ -1.84
PTPN12-213ENST00000519553 PPIAL4EA0A075B759 164 aa3.55□□□□□ -1.84
PTPN12-213ENST00000519553 IGKV1D-13A0A0B4J2D9 117 aa3.55□□□□□ -1.84
PTPN12-213ENST00000519553 LRCOL1A6NCL2 159 aa3.55□□□□□ -1.84
PTPN12-213ENST00000519553 UPK3AO75631 287 aa3.55□□□□□ -1.84
PTPN12-213ENST00000519553 OR7A10O76100 309 aa3.55□□□□□ -1.84
PTPN12-213ENST00000519553 TSPAN12O95859 305 aa3.55□□□□□ -1.84
PTPN12-213ENST00000519553 FGF1P05230 155 aa3.55□□□□□ -1.84
PTPN12-213ENST00000519553 RETP07949 1114 aa3.55□□□□□ -1.84
PTPN12-213ENST00000519553 PPIAL4FP0DN26 164 aa3.55□□□□□ -1.84
PTPN12-213ENST00000519553 IGKV1-13P0DP09 117 aa3.55□□□□□ -1.84
PTPN12-213ENST00000519553 FDFT1P37268 417 aa3.55□□□□□ -1.84
PTPN12-213ENST00000519553 MNAT1P51948 309 aa3.55□□□□□ -1.84
PTPN12-213ENST00000519553 IRX3P78415 501 aaPredicted RBP3.55□□□□□ -1.84
PTPN12-213ENST00000519553 CHIT1Q13231 466 aa3.55□□□□□ -1.84
PTPN12-213ENST00000519553 TRIM40Q6P9F5 258 aa3.55□□□□□ -1.84
PTPN12-213ENST00000519553 ACTRT1Q8TDG2 376 aa3.55□□□□□ -1.84
PTPN12-213ENST00000519553 DNAJC19Q96DA6 116 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms