RNA–Protein interactions for RNA: ENST00000516414.1

RNU6-1049P-201, Transcript of RNA, U6 small nuclear 1049, pseudogene, humanhuman

BASIC

Gene RNU6-1049P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1049P-201ENST00000516414 NXF5Q9H1B4 397 aaKnown RBP-0.03□□□□□ -2.41
RNU6-1049P-201ENST00000516414 DEFB127Q9H1M4 99 aa-0.03□□□□□ -2.41
RNU6-1049P-201ENST00000516414 PORCNQ9H237 461 aa-0.03□□□□□ -2.41
RNU6-1049P-201ENST00000516414 ZNF385DQ9H6B1 395 aa-0.03□□□□□ -2.41
RNU6-1049P-201ENST00000516414 RPF2Q9H7B2 306 aaKnown RBP-0.03□□□□□ -2.41
RNU6-1049P-201ENST00000516414 VIPAS39Q9H9C1 493 aa-0.03□□□□□ -2.41
RNU6-1049P-201ENST00000516414 SIAEQ9HAT2 523 aa-0.03□□□□□ -2.41
RNU6-1049P-201ENST00000516414 ELOVL3Q9HB03 270 aa-0.03□□□□□ -2.41
RNU6-1049P-201ENST00000516414 KCNJ16Q9NPI9 418 aa-0.03□□□□□ -2.41
RNU6-1049P-201ENST00000516414 LHX9Q9NQ69 397 aa-0.03□□□□□ -2.41
RNU6-1049P-201ENST00000516414 C8orf17Q9NRJ1 99 aa-0.03□□□□□ -2.41
RNU6-1049P-201ENST00000516414 SMOXQ9NWM0 555 aa-0.03□□□□□ -2.41
RNU6-1049P-201ENST00000516414 CALYQ9NYX4 217 aa-0.03□□□□□ -2.41
RNU6-1049P-201ENST00000516414 EHFQ9NZC4 300 aa-0.03□□□□□ -2.41
RNU6-1049P-201ENST00000516414 TMOD2Q9NZR1 351 aa-0.03□□□□□ -2.41
RNU6-1049P-201ENST00000516414 VPS18Q9P253 973 aa-0.03□□□□□ -2.41
RNU6-1049P-201ENST00000516414 PCYOX1Q9UHG3 505 aa-0.03□□□□□ -2.41
RNU6-1049P-201ENST00000516414 CDH7Q9ULB5 785 aa-0.03□□□□□ -2.41
RNU6-1049P-201ENST00000516414 ZNF490Q9ULM2 529 aaPredicted RBP-0.03□□□□□ -2.41
RNU6-1049P-201ENST00000516414 B9D1Q9UPM9 204 aa-0.03□□□□□ -2.41
RNU6-1049P-201ENST00000516414 SAMD4AQ9UPU9 718 aaKnown RBP-0.03□□□□□ -2.41
RNU6-1049P-201ENST00000516414 GSTK1Q9Y2Q3 226 aa-0.03□□□□□ -2.41
RNU6-1049P-201ENST00000516414 TDRKHQ9Y2W6 561 aaKnown RBP-0.03□□□□□ -2.41
RNU6-1049P-201ENST00000516414 PLLPQ9Y342 182 aa-0.03□□□□□ -2.41
RNU6-1049P-201ENST00000516414 OARD1Q9Y530 152 aa-0.03□□□□□ -2.41
RNU6-1049P-201ENST00000516414 SLC25A15Q9Y619 301 aa-0.03□□□□□ -2.41
RNU6-1049P-201ENST00000516414 NPTNQ9Y639 398 aa-0.03□□□□□ -2.41
RNU6-1049P-201ENST00000516414 ALG6Q9Y672 507 aa-0.03□□□□□ -2.41
RNU6-1049P-201ENST00000516414 R4GN34 69 aa-0.03□□□□□ -2.41
RNU6-1049P-201ENST00000516414 MYOFQ9NZM1 2061 aa-0.03□□□□□ -2.41
RNU6-1049P-201ENST00000516414 AHDC1Q5TGY3 1603 aaPredicted RBP-0.03□□□□□ -2.41
RNU6-1049P-201ENST00000516414 MIA3Q5JRA6 1907 aa-0.03□□□□□ -2.41
RNU6-1049P-201ENST00000516414 BRD4O60885 1362 aaPredicted RBP-0.04□□□□□ -2.42
RNU6-1049P-201ENST00000516414 RPAP1Q9BWH6 1393 aaPredicted RBP-0.04□□□□□ -2.42
RNU6-1049P-201ENST00000516414 SYNE1Q8NF91 8797 aaKnown RBP-0.04□□□□□ -2.42
RNU6-1049P-201ENST00000516414 FRAS1Q86XX4 4008 aa-0.04□□□□□ -2.42
RNU6-1049P-201ENST00000516414 FRMPD4Q14CM0 1322 aa-0.04□□□□□ -2.42
RNU6-1049P-201ENST00000516414 ZNF644Q9H582 1327 aaPredicted RBP-0.04□□□□□ -2.42
RNU6-1049P-201ENST00000516414 MYH11P35749 1972 aa-0.04□□□□□ -2.42
RNU6-1049P-201ENST00000516414 IGLV4-60A0A075B6I1 120 aa-0.04□□□□□ -2.42
RNU6-1049P-201ENST00000516414 IGLV10-54A0A075B6I4 117 aa-0.04□□□□□ -2.42
RNU6-1049P-201ENST00000516414 IGKV1OR2-108A0A075B7D4 117 aa-0.04□□□□□ -2.42
RNU6-1049P-201ENST00000516414 IGHV1OR21-1A0A087WYE8 117 aa-0.04□□□□□ -2.42
RNU6-1049P-201ENST00000516414 IGHV7-81A0A0B4J1V7 117 aa-0.04□□□□□ -2.42
RNU6-1049P-201ENST00000516414 IGHV2-70DA0A0C4DH43 119 aa-0.04□□□□□ -2.42
RNU6-1049P-201ENST00000516414 LOC100653049A0A140TA62 436 aa-0.04□□□□□ -2.42
RNU6-1049P-201ENST00000516414 IQCMA0A1B0GVH7 501 aa-0.04□□□□□ -2.42
RNU6-1049P-201ENST00000516414 BCLAF3A2AJT9 711 aaKnown RBP-0.04□□□□□ -2.42
RNU6-1049P-201ENST00000516414 CFAP73A6NFT4 308 aa-0.04□□□□□ -2.42
RNU6-1049P-201ENST00000516414 FBLL1A6NHQ2 334 aaKnown RBP-0.04□□□□□ -2.42
RNU6-1049P-201ENST00000516414 ZNF850A8MQ14 1090 aa-0.04□□□□□ -2.42
RNU6-1049P-201ENST00000516414 BTNL10A8MVZ5 291 aa-0.04□□□□□ -2.42
RNU6-1049P-201ENST00000516414 INS-IGF2F8WCM5 200 aa-0.04□□□□□ -2.42
RNU6-1049P-201ENST00000516414 J3QRE1 110 aa-0.04□□□□□ -2.42
RNU6-1049P-201ENST00000516414 DDX39AO00148 427 aaKnown RBP-0.04□□□□□ -2.42
RNU6-1049P-201ENST00000516414 LGALS8O00214 317 aa-0.04□□□□□ -2.42
RNU6-1049P-201ENST00000516414 PLPP1O14494 284 aa-0.04□□□□□ -2.42
RNU6-1049P-201ENST00000516414 IFIT3O14879 490 aaKnown RBP-0.04□□□□□ -2.42
RNU6-1049P-201ENST00000516414 PPP1R2P9O14990 202 aa-0.04□□□□□ -2.42
RNU6-1049P-201ENST00000516414 AGPAT2O15120 278 aa-0.04□□□□□ -2.42
RNU6-1049P-201ENST00000516414 RAD51BO15315 384 aa-0.04□□□□□ -2.42
RNU6-1049P-201ENST00000516414 CHADO15335 359 aa-0.04□□□□□ -2.42
RNU6-1049P-201ENST00000516414 EIF3HO15372 352 aaKnown RBP eCLIP-0.04□□□□□ -2.42
RNU6-1049P-201ENST00000516414 CFLARO15519 480 aa-0.04□□□□□ -2.42
RNU6-1049P-201ENST00000516414 DPM1O60762 260 aa-0.04□□□□□ -2.42
RNU6-1049P-201ENST00000516414 TOM1O60784 492 aa-0.04□□□□□ -2.42
RNU6-1049P-201ENST00000516414 PFKFB2O60825 505 aa-0.04□□□□□ -2.42
RNU6-1049P-201ENST00000516414 CDH16O75309 829 aa-0.04□□□□□ -2.42
RNU6-1049P-201ENST00000516414 ZNF189O75820 626 aaPredicted RBP-0.04□□□□□ -2.42
RNU6-1049P-201ENST00000516414 KRT34O76011 436 aa-0.04□□□□□ -2.42
RNU6-1049P-201ENST00000516414 RCBTB2O95199 551 aa-0.04□□□□□ -2.42
RNU6-1049P-201ENST00000516414 SIX3O95343 332 aaPredicted RBP-0.04□□□□□ -2.42
RNU6-1049P-201ENST00000516414 CLIC3O95833 236 aa-0.04□□□□□ -2.42
RNU6-1049P-201ENST00000516414 TSPAN13O95857 204 aa-0.04□□□□□ -2.42
RNU6-1049P-201ENST00000516414 IFNB1P01574 187 aa-0.04□□□□□ -2.42
RNU6-1049P-201ENST00000516414 IGLV2-8P01709 118 aa-0.04□□□□□ -2.42
RNU6-1049P-201ENST00000516414 IGHMP01871 453 aa-0.04□□□□□ -2.42
RNU6-1049P-201ENST00000516414 IGHDP01880 384 aa-0.04□□□□□ -2.42
RNU6-1049P-201ENST00000516414 FGGP02679 453 aa-0.04□□□□□ -2.42
RNU6-1049P-201ENST00000516414 TRGV3P03979 118 aa-0.04□□□□□ -2.42
RNU6-1049P-201ENST00000516414 SERPINF2P08697 491 aa-0.04□□□□□ -2.42
RNU6-1049P-201ENST00000516414 HBQ1P09105 142 aa-0.04□□□□□ -2.42
RNU6-1049P-201ENST00000516414 MMP10P09238 476 aa-0.04□□□□□ -2.42
RNU6-1049P-201ENST00000516414 CSF3P09919 207 aa-0.04□□□□□ -2.42
RNU6-1049P-201ENST00000516414 OR56A5P0C7T3 313 aa-0.04□□□□□ -2.42
RNU6-1049P-201ENST00000516414 ZNF735P0CB33 412 aa-0.04□□□□□ -2.42
RNU6-1049P-201ENST00000516414 GKN3PP0CG01 181 aa-0.04□□□□□ -2.42
RNU6-1049P-201ENST00000516414 IGHV3-43DP0DP04 118 aa-0.04□□□□□ -2.42
RNU6-1049P-201ENST00000516414 LYNX1P0DP58 116 aa-0.04□□□□□ -2.42
RNU6-1049P-201ENST00000516414 CLUP10909 449 aa-0.04□□□□□ -2.42
RNU6-1049P-201ENST00000516414 CD99P14209 185 aa-0.04□□□□□ -2.42
RNU6-1049P-201ENST00000516414 NCF1P14598 390 aaPredicted RBP-0.04□□□□□ -2.42
RNU6-1049P-201ENST00000516414 ABOP16442 354 aa-0.04□□□□□ -2.42
RNU6-1049P-201ENST00000516414 GABRG2P18507 467 aa-0.04□□□□□ -2.42
RNU6-1049P-201ENST00000516414 CSRP1P21291 193 aaKnown RBP-0.04□□□□□ -2.42
RNU6-1049P-201ENST00000516414 NT5EP21589 574 aa-0.04□□□□□ -2.42
RNU6-1049P-201ENST00000516414 CALB2P22676 271 aa-0.04□□□□□ -2.42
RNU6-1049P-201ENST00000516414 GNA11P29992 359 aa-0.04□□□□□ -2.42
RNU6-1049P-201ENST00000516414 SOAT1P35610 550 aa-0.04□□□□□ -2.42
RNU6-1049P-201ENST00000516414 TGFBR2P37173 567 aa-0.04□□□□□ -2.42
Retrieved 100 of 20,778 RNA–protein pairs in 150.2 ms