RNA–Protein interactions for RNA: ENST00000514929.1

SNF8-213, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 775 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-213ENST00000514929 ARPC4-TTLL3A0A0A6YYG9 625 aa21.38■■□□□ 1.01
SNF8-213ENST00000514929 ATP6V1G2-DDX39BF2Z307 99 aa21.38■■□□□ 1.01
SNF8-213ENST00000514929 M0R3G1 203 aa21.38■■□□□ 1.01
SNF8-213ENST00000514929 PLPP3O14495 311 aa21.38■■□□□ 1.01
SNF8-213ENST00000514929 SERPINI2O75830 405 aa21.38■■□□□ 1.01
SNF8-213ENST00000514929 LYPD3O95274 346 aa21.38■■□□□ 1.01
SNF8-213ENST00000514929 ADORA3P0DMS8 318 aa21.38■■□□□ 1.01
SNF8-213ENST00000514929 TUBA1BP68363 451 aa21.38■■□□□ 1.01
SNF8-213ENST00000514929 TUBA4AP68366 448 aa21.38■■□□□ 1.01
SNF8-213ENST00000514929 ZNF544Q6NX49 715 aa21.38■■□□□ 1.01
SNF8-213ENST00000514929 TUBA1AQ71U36 451 aa21.38■■□□□ 1.01
SNF8-213ENST00000514929 TSPYL5Q86VY4 417 aaPredicted RBP21.38■■□□□ 1.01
SNF8-213ENST00000514929 SLC38A2Q96QD8 506 aa21.38■■□□□ 1.01
SNF8-213ENST00000514929 KCNS3Q9BQ31 491 aa21.38■■□□□ 1.01
SNF8-213ENST00000514929 NELFAQ9H3P2 528 aa21.38■■□□□ 1.01
SNF8-213ENST00000514929 MED29Q9NX70 200 aa21.38■■□□□ 1.01
SNF8-213ENST00000514929 IGHV1-18A0A0C4DH31 117 aa21.37■■□□□ 1.01
SNF8-213ENST00000514929 SLC35F4A4IF30 521 aa21.37■■□□□ 1.01
SNF8-213ENST00000514929 ZNF726A6NNF4 738 aa21.37■■□□□ 1.01
SNF8-213ENST00000514929 FAM220BPB1ANY3 271 aa21.37■■□□□ 1.01
SNF8-213ENST00000514929 KPNA4O00629 521 aaPredicted RBP21.37■■□□□ 1.01
SNF8-213ENST00000514929 LY6G6DO95868 133 aa21.37■■□□□ 1.01
SNF8-213ENST00000514929 CH25HO95992 272 aa21.37■■□□□ 1.01
SNF8-213ENST00000514929 IGHV4-39P01824 125 aa21.37■■□□□ 1.01
SNF8-213ENST00000514929 HEXAP06865 529 aa21.37■■□□□ 1.01
SNF8-213ENST00000514929 HOXB1P14653 301 aaPredicted RBP21.37■■□□□ 1.01
SNF8-213ENST00000514929 TNFRSF1BP20333 461 aa21.37■■□□□ 1.01
SNF8-213ENST00000514929 TNK1Q13470 666 aa21.37■■□□□ 1.01
SNF8-213ENST00000514929 ZNF74Q16587 644 aa21.37■■□□□ 1.01
SNF8-213ENST00000514929 PXKQ7Z7A4 578 aa21.37■■□□□ 1.01
SNF8-213ENST00000514929 OR2T12Q8NG77 320 aa21.37■■□□□ 1.01
SNF8-213ENST00000514929 RP9Q8TA86 221 aaKnown RBP21.37■■□□□ 1.01
SNF8-213ENST00000514929 TXNDC15Q96J42 360 aa21.37■■□□□ 1.01
SNF8-213ENST00000514929 ADAD1Q96M93 576 aaKnown RBP21.37■■□□□ 1.01
SNF8-213ENST00000514929 CACNG6Q9BXT2 260 aa21.37■■□□□ 1.01
SNF8-213ENST00000514929 BARX1Q9HBU1 254 aaPredicted RBP21.37■■□□□ 1.01
SNF8-213ENST00000514929 MOV10Q9HCE1 1003 aaKnown RBP21.37■■□□□ 1.01
SNF8-213ENST00000514929 B3GAT2Q9NPZ5 323 aa21.37■■□□□ 1.01
SNF8-213ENST00000514929 NANSQ9NR45 359 aa21.37■■□□□ 1.01
SNF8-213ENST00000514929 GDF2Q9UK05 429 aaPredicted RBP21.37■■□□□ 1.01
SNF8-213ENST00000514929 C11orf98E9PRG8 122 aa21.36■■□□□ 1.01
SNF8-213ENST00000514929 ATP8B1O43520 1251 aa21.36■■□□□ 1.01
SNF8-213ENST00000514929 CCDC22O60826 627 aa21.36■■□□□ 1.01
SNF8-213ENST00000514929 NDUFS7O75251 213 aa21.36■■□□□ 1.01
SNF8-213ENST00000514929 ACVR1BP36896 505 aa21.36■■□□□ 1.01
SNF8-213ENST00000514929 TAS2R41P59536 307 aa21.36■■□□□ 1.01
SNF8-213ENST00000514929 LRRC23Q53EV4 343 aaPredicted RBP21.36■■□□□ 1.01
SNF8-213ENST00000514929 DEF8Q6ZN54 512 aa21.36■■□□□ 1.01
SNF8-213ENST00000514929 C20orf196Q8IYI0 205 aa21.36■■□□□ 1.01
SNF8-213ENST00000514929 ZNF837Q96EG3 531 aaPredicted RBP21.36■■□□□ 1.01
SNF8-213ENST00000514929 SLC19A3Q9BZV2 496 aa21.36■■□□□ 1.01
SNF8-213ENST00000514929 HEATR1Q9H583 2144 aaKnown RBP21.36■■□□□ 1.01
SNF8-213ENST00000514929 CRYAAP02489 173 aa21.35■■□□□ 1.01
SNF8-213ENST00000514929 UMPSP11172 480 aa21.35■■□□□ 1.01
SNF8-213ENST00000514929 CAMK2DQ13557 499 aa21.35■■□□□ 1.01
SNF8-213ENST00000514929 PHYHD1Q5SRE7 291 aa21.35■■□□□ 1.01
SNF8-213ENST00000514929 C11orf71Q6IPW1 123 aa21.35■■□□□ 1.01
SNF8-213ENST00000514929 MICU2Q8IYU8 434 aa21.35■■□□□ 1.01
SNF8-213ENST00000514929 OR6N1Q8NGY5 312 aa21.35■■□□□ 1.01
SNF8-213ENST00000514929 LRR1Q96L50 414 aa21.35■■□□□ 1.01
SNF8-213ENST00000514929 PRSS27Q9BQR3 290 aa21.35■■□□□ 1.01
SNF8-213ENST00000514929 ZNF426Q9BUY5 554 aa21.35■■□□□ 1.01
SNF8-213ENST00000514929 KATNB1Q9BVA0 655 aa21.35■■□□□ 1.01
SNF8-213ENST00000514929 AP3M1Q9Y2T2 418 aa21.35■■□□□ 1.01
SNF8-213ENST00000514929 ELOVL7A1L3X0 281 aa21.34■■□□□ 1.01
SNF8-213ENST00000514929 ZNF99A8MXY4 864 aaPredicted RBP21.34■■□□□ 1.01
SNF8-213ENST00000514929 SHOX2O60902 331 aaPredicted RBP21.34■■□□□ 1.01
SNF8-213ENST00000514929 SEC14L2O76054 403 aa21.34■■□□□ 1.01
SNF8-213ENST00000514929 HIST1H2ABP04908 130 aa21.34■■□□□ 1.01
SNF8-213ENST00000514929 COX4I1P13073 169 aa21.34■■□□□ 1.01
SNF8-213ENST00000514929 APOBEC3AP31941 199 aaPredicted RBP21.34■■□□□ 1.01
SNF8-213ENST00000514929 KDELR2P33947 212 aa21.34■■□□□ 1.01
SNF8-213ENST00000514929 CAPZA2P47755 286 aa21.34■■□□□ 1.01
SNF8-213ENST00000514929 OR1E2P47887 323 aa21.34■■□□□ 1.01
SNF8-213ENST00000514929 CYBRD1Q53TN4 286 aa21.34■■□□□ 1.01
SNF8-213ENST00000514929 NHLRC1Q6VVB1 395 aa21.34■■□□□ 1.01
SNF8-213ENST00000514929 HIST3H2AQ7L7L0 130 aa21.34■■□□□ 1.01
SNF8-213ENST00000514929 ARPINQ7Z6K5 226 aa21.34■■□□□ 1.01
SNF8-213ENST00000514929 HIST1H2ACQ93077 130 aa21.34■■□□□ 1.01
SNF8-213ENST00000514929 POM121Q96HA1 1249 aa21.34■■□□□ 1.01
SNF8-213ENST00000514929 POLR2J2Q9GZM3 115 aaKnown RBP21.34■■□□□ 1.01
SNF8-213ENST00000514929 POLR2J3Q9H1A7 115 aaKnown RBP21.34■■□□□ 1.01
SNF8-213ENST00000514929 CRNNQ9UBG3 495 aaPredicted RBP21.34■■□□□ 1.01
SNF8-213ENST00000514929 ZNF229Q9UJW7 825 aa21.34■■□□□ 1.01
SNF8-213ENST00000514929 NIPBLQ6KC79 2804 aaeCLIP21.34■■□□□ 1.01
SNF8-213ENST00000514929 PLCE1Q9P212 2302 aa21.34■■□□□ 1.01
SNF8-213ENST00000514929 BMP4P12644 408 aa21.33■■□□□ 1.01
SNF8-213ENST00000514929 IFNGR1P15260 489 aa21.33■■□□□ 1.01
SNF8-213ENST00000514929 BIDP55957 195 aa21.33■■□□□ 1.01
SNF8-213ENST00000514929 CHRNB3Q05901 458 aa21.33■■□□□ 1.01
SNF8-213ENST00000514929 C3orf36Q3SXR2 165 aa21.33■■□□□ 1.01
SNF8-213ENST00000514929 LRRC17Q8N6Y2 441 aa21.33■■□□□ 1.01
SNF8-213ENST00000514929 FAM169BQ8N8A8 192 aa21.33■■□□□ 1.01
SNF8-213ENST00000514929 TPD52L3Q96J77 140 aa21.33■■□□□ 1.01
SNF8-213ENST00000514929 ULBP2Q9BZM5 246 aa21.33■■□□□ 1.01
SNF8-213ENST00000514929 CMTM6Q9NX76 183 aa21.33■■□□□ 1.01
SNF8-213ENST00000514929 RIMS3Q9UJD0 308 aa21.33■■□□□ 1.01
SNF8-213ENST00000514929 POFUT2Q9Y2G5 429 aa21.33■■□□□ 1.01
SNF8-213ENST00000514929 RNF13O43567 381 aa21.32■■□□□ 1
SNF8-213ENST00000514929 SSX4O60224 188 aa21.32■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms