RNA–Protein interactions for RNA: ENST00000513960.5

VCAN-210, Transcript of versican, humanhuman

TSL 1 (best)

Gene VCAN, Length 3,973 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-210ENST00000513960 OR1Q1Q15612 314 aa8.84□□□□□ -0.99
VCAN-210ENST00000513960 GUCA2BQ16661 112 aa8.84□□□□□ -0.99
VCAN-210ENST00000513960 FAM209BQ5JX69 171 aa8.84□□□□□ -0.99
VCAN-210ENST00000513960 PRAMEF8Q5VWM4 474 aa8.84□□□□□ -0.99
VCAN-210ENST00000513960 PRAMEF7Q5VXH5 474 aa8.84□□□□□ -0.99
VCAN-210ENST00000513960 ZNF626Q68DY1 528 aa8.84□□□□□ -0.99
VCAN-210ENST00000513960 SVBPQ8N300 66 aa8.84□□□□□ -0.99
VCAN-210ENST00000513960 MFSD9Q8NBP5 474 aa8.84□□□□□ -0.99
VCAN-210ENST00000513960 INO80EQ8NBZ0 244 aaPredicted RBP8.84□□□□□ -0.99
VCAN-210ENST00000513960 OR5T2Q8NGG2 359 aa8.84□□□□□ -0.99
VCAN-210ENST00000513960 OR4C16Q8NGL9 310 aa8.84□□□□□ -0.99
VCAN-210ENST00000513960 PTCHD1Q96NR3 888 aa8.84□□□□□ -0.99
VCAN-210ENST00000513960 C4orf51C9J302 202 aa8.84□□□□□ -0.99
VCAN-210ENST00000513960 SYT5O00445 386 aa8.84□□□□□ -0.99
VCAN-210ENST00000513960 AMY2AP04746 511 aa8.84□□□□□ -0.99
VCAN-210ENST00000513960 IGFALSP35858 605 aa8.84□□□□□ -0.99
VCAN-210ENST00000513960 AKR1C3P42330 323 aa8.84□□□□□ -0.99
VCAN-210ENST00000513960 TSFMP43897 325 aaKnown RBP8.84□□□□□ -0.99
VCAN-210ENST00000513960 RAB13P51153 203 aa8.84□□□□□ -0.99
VCAN-210ENST00000513960 OR7A5Q15622 319 aa8.84□□□□□ -0.99
VCAN-210ENST00000513960 GLB1L2Q8IW92 636 aa8.84□□□□□ -0.99
VCAN-210ENST00000513960 FOXRED2Q8IWF2 684 aa8.84□□□□□ -0.99
VCAN-210ENST00000513960 GTPBP8Q8N3Z3 284 aaPredicted RBP8.84□□□□□ -0.99
VCAN-210ENST00000513960 FAM71CQ8NEG0 241 aa8.84□□□□□ -0.99
VCAN-210ENST00000513960 OR4D10Q8NGI6 311 aa8.84□□□□□ -0.99
VCAN-210ENST00000513960 ADAD1Q96M93 576 aaKnown RBP8.84□□□□□ -0.99
VCAN-210ENST00000513960 OR2M4Q96R27 311 aa8.84□□□□□ -0.99
VCAN-210ENST00000513960 PLA2G2FQ9BZM2 168 aa8.84□□□□□ -0.99
VCAN-210ENST00000513960 KCNK15Q9H427 330 aa8.84□□□□□ -0.99
VCAN-210ENST00000513960 APOBEC3BQ9UH17 382 aaKnown RBP8.84□□□□□ -0.99
VCAN-210ENST00000513960 ZMIZ1Q9ULJ6 1067 aa8.84□□□□□ -0.99
VCAN-210ENST00000513960 SLC35A3Q9Y2D2 325 aa8.84□□□□□ -0.99
VCAN-210ENST00000513960 RAB19A4D1S5 217 aa8.84□□□□□ -0.99
VCAN-210ENST00000513960 IFITM5A6NNB3 132 aa8.84□□□□□ -0.99
VCAN-210ENST00000513960 TTLL8A6PVC2 850 aa8.84□□□□□ -0.99
VCAN-210ENST00000513960 ZGLP1P0C6A0 271 aa8.84□□□□□ -0.99
VCAN-210ENST00000513960 SLC35G6P0C7Q6 338 aa8.84□□□□□ -0.99
VCAN-210ENST00000513960 SHC2P98077 582 aa8.84□□□□□ -0.99
VCAN-210ENST00000513960 BDH1Q02338 343 aa8.84□□□□□ -0.99
VCAN-210ENST00000513960 LTBQ06643 244 aa8.84□□□□□ -0.99
VCAN-210ENST00000513960 MAMSTRQ6ZN01 415 aa8.84□□□□□ -0.99
VCAN-210ENST00000513960 ZNF836Q6ZNA1 936 aa8.84□□□□□ -0.99
VCAN-210ENST00000513960 LRRTM1Q86UE6 522 aa8.84□□□□□ -0.99
VCAN-210ENST00000513960 OR1S2Q8NGQ3 325 aa8.84□□□□□ -0.99
VCAN-210ENST00000513960 SLC25A28Q96A46 364 aa8.84□□□□□ -0.99
VCAN-210ENST00000513960 FBXO17Q96EF6 278 aa8.84□□□□□ -0.99
VCAN-210ENST00000513960 PELI1Q96FA3 418 aa8.84□□□□□ -0.99
VCAN-210ENST00000513960 ZNF285Q96NJ3 590 aa8.84□□□□□ -0.99
VCAN-210ENST00000513960 ACTRT3Q9BYD9 372 aa8.84□□□□□ -0.99
VCAN-210ENST00000513960 ULBP3Q9BZM4 244 aa8.84□□□□□ -0.99
VCAN-210ENST00000513960 CHST6Q9GZX3 395 aa8.84□□□□□ -0.99
VCAN-210ENST00000513960 ATG5Q9H1Y0 275 aa8.84□□□□□ -0.99
VCAN-210ENST00000513960 SRMSQ9H3Y6 488 aa8.84□□□□□ -0.99
VCAN-210ENST00000513960 EMC3Q9P0I2 261 aa8.84□□□□□ -0.99
VCAN-210ENST00000513960 CENPVL1A0A0U1RR11 272 aa8.83□□□□□ -1
VCAN-210ENST00000513960 UBBP0CG47 229 aa8.83□□□□□ -1
VCAN-210ENST00000513960 UBCP0CG48 685 aaKnown RBP8.83□□□□□ -1
VCAN-210ENST00000513960 HTR2AP28223 471 aa8.83□□□□□ -1
VCAN-210ENST00000513960 NDUFS1P28331 727 aa8.83□□□□□ -1
VCAN-210ENST00000513960 RPS27P42677 84 aaKnown RBP8.83□□□□□ -1
VCAN-210ENST00000513960 RPS27AP62979 156 aaKnown RBP8.83□□□□□ -1
VCAN-210ENST00000513960 UBA52P62987 128 aaKnown RBP8.83□□□□□ -1
VCAN-210ENST00000513960 SERTAD2Q14140 314 aa8.83□□□□□ -1
VCAN-210ENST00000513960 CDK5R1Q15078 307 aa8.83□□□□□ -1
VCAN-210ENST00000513960 MANEAQ5SRI9 462 aa8.83□□□□□ -1
VCAN-210ENST00000513960 MRPL2Q5T653 305 aaKnown RBP8.83□□□□□ -1
VCAN-210ENST00000513960 ENPP7Q6UWV6 458 aa8.83□□□□□ -1
VCAN-210ENST00000513960 OR51D1Q8NGF3 324 aa8.83□□□□□ -1
VCAN-210ENST00000513960 SLC22A8Q8TCC7 542 aa8.83□□□□□ -1
VCAN-210ENST00000513960 MRPL48Q96GC5 212 aaKnown RBP8.83□□□□□ -1
VCAN-210ENST00000513960 ZC3H10Q96K80 434 aaKnown RBP8.83□□□□□ -1
VCAN-210ENST00000513960 DOCK9Q9BZ29 2069 aa8.83□□□□□ -1
VCAN-210ENST00000513960 FGF22Q9HCT0 170 aa8.83□□□□□ -1
VCAN-210ENST00000513960 PCDHB10Q9UN67 800 aa8.83□□□□□ -1
VCAN-210ENST00000513960 ADAM18Q9Y3Q7 739 aa8.83□□□□□ -1
VCAN-210ENST00000513960 MYO9BQ13459 2157 aa8.83□□□□□ -1
VCAN-210ENST00000513960 PEX12O00623 359 aa8.83□□□□□ -1
VCAN-210ENST00000513960 CD34P28906 385 aa8.83□□□□□ -1
VCAN-210ENST00000513960 TLX1P31314 330 aaPredicted RBP8.83□□□□□ -1
VCAN-210ENST00000513960 SLC6A6P31641 620 aa8.83□□□□□ -1
VCAN-210ENST00000513960 RPS15P62841 145 aaKnown RBP8.83□□□□□ -1
VCAN-210ENST00000513960 EFNB1P98172 346 aa8.83□□□□□ -1
VCAN-210ENST00000513960 ACSM1Q08AH1 577 aa8.83□□□□□ -1
VCAN-210ENST00000513960 PDZK1IP1Q13113 114 aa8.83□□□□□ -1
VCAN-210ENST00000513960 AMZ1Q400G9 498 aa8.83□□□□□ -1
VCAN-210ENST00000513960 TMEM71Q6P5X7 295 aa8.83□□□□□ -1
VCAN-210ENST00000513960 ASPGQ86U10 573 aa8.83□□□□□ -1
VCAN-210ENST00000513960 SLC35A4Q96G79 324 aa8.83□□□□□ -1
VCAN-210ENST00000513960 NMNAT3Q96T66 252 aa8.83□□□□□ -1
VCAN-210ENST00000513960 HRH4Q9H3N8 390 aa8.83□□□□□ -1
VCAN-210ENST00000513960 ADGRL4Q9HBW9 690 aa8.83□□□□□ -1
VCAN-210ENST00000513960 SRA1Q9HD15 236 aaKnown RBP8.83□□□□□ -1
VCAN-210ENST00000513960 DZANK1Q9NVP4 752 aa8.83□□□□□ -1
VCAN-210ENST00000513960 CHD7Q9P2D1 2997 aa8.83□□□□□ -1
VCAN-210ENST00000513960 BLOC1S5-TXNDC5H3BN57 136 aa8.83□□□□□ -1
VCAN-210ENST00000513960 NDUFB6O95139 128 aa8.83□□□□□ -1
VCAN-210ENST00000513960 SPP1P10451 314 aa8.83□□□□□ -1
VCAN-210ENST00000513960 RPS15AP62244 130 aaKnown RBP8.83□□□□□ -1
VCAN-210ENST00000513960 SNRPEP62304 92 aaKnown RBP8.83□□□□□ -1
VCAN-210ENST00000513960 GAS6Q14393 721 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms