RNA–Protein interactions for RNA: ENST00000513341.5

PDLIM5-218, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-218ENST00000513341 NUDT17P0C025 328 aa3.11□□□□□ -1.91
PDLIM5-218ENST00000513341 OR4A8P0C604 315 aa3.11□□□□□ -1.91
PDLIM5-218ENST00000513341 PCNAP12004 261 aa3.11□□□□□ -1.91
PDLIM5-218ENST00000513341 HOXB9P17482 250 aaPredicted RBP3.11□□□□□ -1.91
PDLIM5-218ENST00000513341 EPORP19235 508 aa3.11□□□□□ -1.91
PDLIM5-218ENST00000513341 NPR2P20594 1047 aa3.11□□□□□ -1.91
PDLIM5-218ENST00000513341 ACHEP22303 614 aa3.11□□□□□ -1.91
PDLIM5-218ENST00000513341 TCEA1P23193 301 aaKnown RBP3.11□□□□□ -1.91
PDLIM5-218ENST00000513341 ELK4P28324 431 aa3.11□□□□□ -1.91
PDLIM5-218ENST00000513341 ARRB2P32121 409 aa3.11□□□□□ -1.91
PDLIM5-218ENST00000513341 SLC1A3P43003 542 aa3.11□□□□□ -1.91
PDLIM5-218ENST00000513341 MAGEA3P43357 314 aa3.11□□□□□ -1.91
PDLIM5-218ENST00000513341 GPR6P46095 362 aaPredicted RBP3.11□□□□□ -1.91
PDLIM5-218ENST00000513341 PRKAA2P54646 552 aa3.11□□□□□ -1.91
PDLIM5-218ENST00000513341 PRPS1P60891 318 aa3.11□□□□□ -1.91
PDLIM5-218ENST00000513341 ATP6V0D1P61421 351 aa3.11□□□□□ -1.91
PDLIM5-218ENST00000513341 TRA2BP62995 288 aaKnown RBP3.11□□□□□ -1.91
PDLIM5-218ENST00000513341 BAMBIQ13145 260 aa3.11□□□□□ -1.91
PDLIM5-218ENST00000513341 EXOSC7Q15024 291 aaKnown RBP3.11□□□□□ -1.91
PDLIM5-218ENST00000513341 TRIP10Q15642 601 aa3.11□□□□□ -1.91
PDLIM5-218ENST00000513341 ADIPOQQ15848 244 aa3.11□□□□□ -1.91
PDLIM5-218ENST00000513341 NNATQ16517 81 aa3.11□□□□□ -1.91
PDLIM5-218ENST00000513341 TAF9Q16594 264 aa3.11□□□□□ -1.91
PDLIM5-218ENST00000513341 DECR1Q16698 335 aa3.11□□□□□ -1.91
PDLIM5-218ENST00000513341 OTUD3Q5T2D3 398 aaPredicted RBP3.11□□□□□ -1.91
PDLIM5-218ENST00000513341 INTS11Q5TA45 600 aaKnown RBP3.11□□□□□ -1.91
PDLIM5-218ENST00000513341 LGSNQ5TDP6 509 aa3.11□□□□□ -1.91
PDLIM5-218ENST00000513341 ASPHD2Q6ICH7 369 aa3.11□□□□□ -1.91
PDLIM5-218ENST00000513341 SYT10Q6XYQ8 523 aa3.11□□□□□ -1.91
PDLIM5-218ENST00000513341 C1orf122Q6ZSJ8 110 aa3.11□□□□□ -1.91
PDLIM5-218ENST00000513341 GSTA5Q7RTV2 222 aa3.11□□□□□ -1.91
PDLIM5-218ENST00000513341 LRRC70Q7Z2Q7 622 aa3.11□□□□□ -1.91
PDLIM5-218ENST00000513341 R3HCC1LQ7Z5L2 792 aaKnown RBP3.11□□□□□ -1.91
PDLIM5-218ENST00000513341 MARCH3Q86UD3 253 aa3.11□□□□□ -1.91
PDLIM5-218ENST00000513341 MISPQ8IVT2 679 aa3.11□□□□□ -1.91
PDLIM5-218ENST00000513341 PAQR4Q8N4S7 273 aaPredicted RBP3.11□□□□□ -1.91
PDLIM5-218ENST00000513341 LRRC57Q8N9N7 239 aa3.11□□□□□ -1.91
PDLIM5-218ENST00000513341 WDR31Q8NA23 367 aa3.11□□□□□ -1.91
PDLIM5-218ENST00000513341 OR4F15Q8NGB8 312 aa3.11□□□□□ -1.91
PDLIM5-218ENST00000513341 OR52R1Q8NGF1 315 aa3.11□□□□□ -1.91
PDLIM5-218ENST00000513341 OR52N4Q8NGI2 321 aa3.11□□□□□ -1.91
PDLIM5-218ENST00000513341 OR4F5Q8NH21 305 aa3.11□□□□□ -1.91
PDLIM5-218ENST00000513341 OR52N5Q8NH56 324 aa3.11□□□□□ -1.91
PDLIM5-218ENST00000513341 CLDND2Q8NHS1 167 aa3.11□□□□□ -1.91
PDLIM5-218ENST00000513341 MAIP1Q8WWC4 291 aa3.11□□□□□ -1.91
PDLIM5-218ENST00000513341 RDH5Q92781 318 aa3.11□□□□□ -1.91
PDLIM5-218ENST00000513341 POP5Q969H6 163 aaKnown RBP3.11□□□□□ -1.91
PDLIM5-218ENST00000513341 KTI12Q96EK9 354 aaPredicted RBP3.11□□□□□ -1.91
PDLIM5-218ENST00000513341 HES6Q96HZ4 224 aa3.11□□□□□ -1.91
PDLIM5-218ENST00000513341 ZNF681Q96N22 645 aa3.11□□□□□ -1.91
PDLIM5-218ENST00000513341 ANKRD27Q96NW4 1050 aa3.11□□□□□ -1.91
PDLIM5-218ENST00000513341 GPR78Q96P69 363 aa3.11□□□□□ -1.91
PDLIM5-218ENST00000513341 BBS4Q96RK4 519 aa3.11□□□□□ -1.91
PDLIM5-218ENST00000513341 SERPINI1Q99574 410 aa3.11□□□□□ -1.91
PDLIM5-218ENST00000513341 GATA5Q9BWX5 397 aaPredicted RBP3.11□□□□□ -1.91
PDLIM5-218ENST00000513341 TBL1XR1Q9BZK7 514 aa3.11□□□□□ -1.91
PDLIM5-218ENST00000513341 SHCBP1LQ9BZQ2 653 aa3.11□□□□□ -1.91
PDLIM5-218ENST00000513341 ZNF442Q9H7R0 627 aa3.11□□□□□ -1.91
PDLIM5-218ENST00000513341 C3orf14Q9HBI5 128 aa3.11□□□□□ -1.91
PDLIM5-218ENST00000513341 POPDC3Q9HBV1 291 aa3.11□□□□□ -1.91
PDLIM5-218ENST00000513341 PLEK2Q9NYT0 353 aa3.11□□□□□ -1.91
PDLIM5-218ENST00000513341 MALT1Q9UDY8 824 aa3.11□□□□□ -1.91
PDLIM5-218ENST00000513341 NOL12Q9UGY1 213 aaKnown RBP eCLIP3.11□□□□□ -1.91
PDLIM5-218ENST00000513341 MOKQ9UQ07 419 aa3.11□□□□□ -1.91
PDLIM5-218ENST00000513341 VDAC3Q9Y277 283 aa3.11□□□□□ -1.91
PDLIM5-218ENST00000513341 OR10H1Q9Y4A9 318 aa3.11□□□□□ -1.91
PDLIM5-218ENST00000513341 ZNF780BQ9Y6R6 833 aa3.11□□□□□ -1.91
PDLIM5-218ENST00000513341 COL7A1Q02388 2944 aa3.1□□□□□ -1.91
PDLIM5-218ENST00000513341 IGKV3D-15A0A087WSY6 115 aa3.1□□□□□ -1.91
PDLIM5-218ENST00000513341 TCRBV7S3A2A0A539 114 aa3.1□□□□□ -1.91
PDLIM5-218ENST00000513341 CLPSL1A2RUU4 121 aa3.1□□□□□ -1.91
PDLIM5-218ENST00000513341 HMGB1P1B2RPK0 211 aaPredicted RBP3.1□□□□□ -1.91
PDLIM5-218ENST00000513341 MCIDASD6RGH6 385 aa3.1□□□□□ -1.91
PDLIM5-218ENST00000513341 ATP6V1G2-DDX39BF2Z307 99 aa3.1□□□□□ -1.91
PDLIM5-218ENST00000513341 K7EPI3 171 aa3.1□□□□□ -1.91
PDLIM5-218ENST00000513341 PDLIM1O00151 329 aa3.1□□□□□ -1.91
PDLIM5-218ENST00000513341 ZNF195O14628 629 aa3.1□□□□□ -1.91
PDLIM5-218ENST00000513341 RRHO14718 337 aa3.1□□□□□ -1.91
PDLIM5-218ENST00000513341 PLPP2O43688 288 aa3.1□□□□□ -1.91
PDLIM5-218ENST00000513341 SH3BGRLO75368 114 aa3.1□□□□□ -1.91
PDLIM5-218ENST00000513341 ERAL1O75616 437 aaKnown RBP3.1□□□□□ -1.91
PDLIM5-218ENST00000513341 RAD51DO75771 328 aa3.1□□□□□ -1.91
PDLIM5-218ENST00000513341 NDUFA7O95182 113 aa3.1□□□□□ -1.91
PDLIM5-218ENST00000513341 MPZL1O95297 269 aa3.1□□□□□ -1.91
PDLIM5-218ENST00000513341 SLU7O95391 586 aaKnown RBP3.1□□□□□ -1.91
PDLIM5-218ENST00000513341 NGFP01138 241 aa3.1□□□□□ -1.91
PDLIM5-218ENST00000513341 HLA-DQA2P01906 255 aa3.1□□□□□ -1.91
PDLIM5-218ENST00000513341 LCKP06239 509 aa3.1□□□□□ -1.91
PDLIM5-218ENST00000513341 IFI6P09912 130 aa3.1□□□□□ -1.91
PDLIM5-218ENST00000513341 ALDOCP09972 364 aaKnown RBP3.1□□□□□ -1.91
PDLIM5-218ENST00000513341 LINGO3P0C6S8 592 aa3.1□□□□□ -1.91
PDLIM5-218ENST00000513341 ZSCAN5DPP0CG00 497 aa3.1□□□□□ -1.91
PDLIM5-218ENST00000513341 SAGP10523 405 aaPredicted RBP3.1□□□□□ -1.91
PDLIM5-218ENST00000513341 CHN1P15882 459 aa3.1□□□□□ -1.91
PDLIM5-218ENST00000513341 PGAM1P18669 254 aa3.1□□□□□ -1.91
PDLIM5-218ENST00000513341 PTMSP20962 102 aa3.1□□□□□ -1.91
PDLIM5-218ENST00000513341 MDKP21741 143 aaPredicted RBP3.1□□□□□ -1.91
PDLIM5-218ENST00000513341 FKBP2P26885 142 aaKnown RBP3.1□□□□□ -1.91
PDLIM5-218ENST00000513341 LCN1P31025 176 aa3.1□□□□□ -1.91
PDLIM5-218ENST00000513341 MPIP34949 423 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms