RNA–Protein interactions for RNA: ENST00000513143.5

PDPN-210, Transcript of podoplanin, humanhuman

TSL 1 (best) BASIC

Gene PDPN, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-210ENST00000513143 TP63Q9H3D4 680 aaPredicted RBP11.16□□□□□ -0.62
PDPN-210ENST00000513143 TXNIPQ9H3M7 391 aa11.16□□□□□ -0.62
PDPN-210ENST00000513143 RNF122Q9H9V4 155 aa11.16□□□□□ -0.62
PDPN-210ENST00000513143 KLHL9Q9P2J3 617 aa11.16□□□□□ -0.62
PDPN-210ENST00000513143 NDRG4Q9ULP0 352 aaKnown RBP11.16□□□□□ -0.62
PDPN-210ENST00000513143 IER3IP1Q9Y5U9 82 aa11.16□□□□□ -0.62
PDPN-210ENST00000513143 ZFYVE26Q68DK2 2539 aa11.16□□□□□ -0.62
PDPN-210ENST00000513143 RP1L1Q8IWN7 2480 aaPredicted RBP11.15□□□□□ -0.62
PDPN-210ENST00000513143 LOC100130705A0A1B0GUX0 176 aa11.15□□□□□ -0.62
PDPN-210ENST00000513143 A0A1W2PRG6 482 aa11.15□□□□□ -0.62
PDPN-210ENST00000513143 ZNF724A8MTY0 619 aa11.15□□□□□ -0.62
PDPN-210ENST00000513143 H0YAE9 185 aa11.15□□□□□ -0.62
PDPN-210ENST00000513143 IMPA2O14732 288 aa11.15□□□□□ -0.62
PDPN-210ENST00000513143 TRAF3IP2O43734 574 aaPredicted RBP11.15□□□□□ -0.62
PDPN-210ENST00000513143 PPP1R3DO95685 299 aa11.15□□□□□ -0.62
PDPN-210ENST00000513143 TXNDC12O95881 172 aa11.15□□□□□ -0.62
PDPN-210ENST00000513143 GRK5P34947 590 aa11.15□□□□□ -0.62
PDPN-210ENST00000513143 CAPGP40121 348 aa11.15□□□□□ -0.62
PDPN-210ENST00000513143 RPS6KA3P51812 740 aa11.15□□□□□ -0.62
PDPN-210ENST00000513143 RPL27P61353 136 aaKnown RBP11.15□□□□□ -0.62
PDPN-210ENST00000513143 ERVK-25P63136 954 aa11.15□□□□□ -0.62
PDPN-210ENST00000513143 C1DQ13901 141 aaKnown RBP11.15□□□□□ -0.62
PDPN-210ENST00000513143 ACKR1Q16570 336 aa11.15□□□□□ -0.62
PDPN-210ENST00000513143 PGGHGQ32M88 737 aa11.15□□□□□ -0.62
PDPN-210ENST00000513143 TTC23Q5W5X9 447 aa11.15□□□□□ -0.62
PDPN-210ENST00000513143 C12orf73Q69YU5 71 aa11.15□□□□□ -0.62
PDPN-210ENST00000513143 GPR139Q6DWJ6 353 aa11.15□□□□□ -0.62
PDPN-210ENST00000513143 RPTNQ6XPR3 784 aa11.15□□□□□ -0.62
PDPN-210ENST00000513143 SLC35D2Q76EJ3 337 aa11.15□□□□□ -0.62
PDPN-210ENST00000513143 P4HA3Q7Z4N8 544 aa11.15□□□□□ -0.62
PDPN-210ENST00000513143 IQCF1Q8N6M8 205 aa11.15□□□□□ -0.62
PDPN-210ENST00000513143 ZIC4Q8N9L1 334 aa11.15□□□□□ -0.62
PDPN-210ENST00000513143 ZNF555Q8NEP9 628 aa11.15□□□□□ -0.62
PDPN-210ENST00000513143 TFAP2CQ92754 450 aa11.15□□□□□ -0.62
PDPN-210ENST00000513143 ERMAPQ96PL5 475 aaPredicted RBP11.15□□□□□ -0.62
PDPN-210ENST00000513143 TSPAN32Q96QS1 320 aa11.15□□□□□ -0.62
PDPN-210ENST00000513143 KCNK17Q96T54 332 aa11.15□□□□□ -0.62
PDPN-210ENST00000513143 ZNF184Q99676 751 aaPredicted RBP11.15□□□□□ -0.62
PDPN-210ENST00000513143 PITX2Q99697 317 aa11.15□□□□□ -0.62
PDPN-210ENST00000513143 TACO1Q9BSH4 297 aaKnown RBP11.15□□□□□ -0.62
PDPN-210ENST00000513143 ADI1Q9BV57 179 aa11.15□□□□□ -0.62
PDPN-210ENST00000513143 POLDIP3Q9BY77 421 aaKnown RBP11.15□□□□□ -0.62
PDPN-210ENST00000513143 BCO1Q9HAY6 547 aa11.15□□□□□ -0.62
PDPN-210ENST00000513143 GP6Q9HCN6 339 aa11.15□□□□□ -0.62
PDPN-210ENST00000513143 ZNF346Q9UL40 294 aaKnown RBP11.15□□□□□ -0.62
PDPN-210ENST00000513143 ADAM18Q9Y3Q7 739 aa11.15□□□□□ -0.62
PDPN-210ENST00000513143 FAM215AQ9Y5M1 114 aa11.15□□□□□ -0.62
PDPN-210ENST00000513143 FLVCR1Q9Y5Y0 555 aa11.15□□□□□ -0.62
PDPN-210ENST00000513143 MBD3L4A6NDZ8 208 aaPredicted RBP11.14□□□□□ -0.63
PDPN-210ENST00000513143 MBD3L3A6NE82 208 aaPredicted RBP11.14□□□□□ -0.63
PDPN-210ENST00000513143 MBD3L5A6NJ08 208 aaPredicted RBP11.14□□□□□ -0.63
PDPN-210ENST00000513143 B8ZZF3 427 aa11.14□□□□□ -0.63
PDPN-210ENST00000513143 GPR171O14626 319 aa11.14□□□□□ -0.63
PDPN-210ENST00000513143 SERPINI2O75830 405 aa11.14□□□□□ -0.63
PDPN-210ENST00000513143 BCL10O95999 233 aa11.14□□□□□ -0.63
PDPN-210ENST00000513143 PLGP00747 810 aaPredicted RBP11.14□□□□□ -0.63
PDPN-210ENST00000513143 HMGN1P05114 100 aa11.14□□□□□ -0.63
PDPN-210ENST00000513143 YES1P07947 543 aa11.14□□□□□ -0.63
PDPN-210ENST00000513143 IFNGR1P15260 489 aa11.14□□□□□ -0.63
PDPN-210ENST00000513143 SDHAP31040 664 aa11.14□□□□□ -0.63
PDPN-210ENST00000513143 GGT2P36268 569 aa11.14□□□□□ -0.63
PDPN-210ENST00000513143 DAP3P51398 398 aaKnown RBP11.14□□□□□ -0.63
PDPN-210ENST00000513143 MYBPC1Q00872 1141 aa11.14□□□□□ -0.63
PDPN-210ENST00000513143 KEAP1Q14145 624 aa11.14□□□□□ -0.63
PDPN-210ENST00000513143 ARMC4Q5T2S8 1044 aa11.14□□□□□ -0.63
PDPN-210ENST00000513143 SEM1Q6ZVN7 128 aa11.14□□□□□ -0.63
PDPN-210ENST00000513143 ARIH2OSQ8N7S6 290 aa11.14□□□□□ -0.63
PDPN-210ENST00000513143 C9orf106Q8NAJ2 232 aa11.14□□□□□ -0.63
PDPN-210ENST00000513143 MBD3L2Q8NHZ7 208 aaPredicted RBP11.14□□□□□ -0.63
PDPN-210ENST00000513143 ZNF519Q8TB69 540 aa11.14□□□□□ -0.63
PDPN-210ENST00000513143 CYGBQ8WWM9 190 aa11.14□□□□□ -0.63
PDPN-210ENST00000513143 ASB10Q8WXI3 467 aa11.14□□□□□ -0.63
PDPN-210ENST00000513143 TXNDC15Q96J42 360 aa11.14□□□□□ -0.63
PDPN-210ENST00000513143 Q96M85 177 aa11.14□□□□□ -0.63
PDPN-210ENST00000513143 ZNF385AQ96PM9 386 aaKnown RBP11.14□□□□□ -0.63
PDPN-210ENST00000513143 TM9SF2Q99805 663 aa11.14□□□□□ -0.63
PDPN-210ENST00000513143 TEX12Q9BXU0 123 aa11.14□□□□□ -0.63
PDPN-210ENST00000513143 GLRX2Q9NS18 164 aa11.14□□□□□ -0.63
PDPN-210ENST00000513143 MED29Q9NX70 200 aa11.14□□□□□ -0.63
PDPN-210ENST00000513143 GRHPRQ9UBQ7 328 aa11.14□□□□□ -0.63
PDPN-210ENST00000513143 TINAGQ9UJW2 476 aa11.14□□□□□ -0.63
PDPN-210ENST00000513143 INTS1Q8N201 2190 aaKnown RBP11.14□□□□□ -0.63
PDPN-210ENST00000513143 A6NIZ1 184 aa11.13□□□□□ -0.63
PDPN-210ENST00000513143 SURF4O15260 269 aa11.13□□□□□ -0.63
PDPN-210ENST00000513143 SS18L1O75177 396 aaPredicted RBP11.13□□□□□ -0.63
PDPN-210ENST00000513143 PRB1P04280 392 aa11.13□□□□□ -0.63
PDPN-210ENST00000513143 NOS3P29474 1203 aa11.13□□□□□ -0.63
PDPN-210ENST00000513143 TIMP3P35625 211 aa11.13□□□□□ -0.63
PDPN-210ENST00000513143 RAP1BP61224 184 aa11.13□□□□□ -0.63
PDPN-210ENST00000513143 RAP1AP62834 184 aa11.13□□□□□ -0.63
PDPN-210ENST00000513143 TOP3AQ13472 1001 aaPredicted RBP11.13□□□□□ -0.63
PDPN-210ENST00000513143 GUSBP1Q15486 140 aa11.13□□□□□ -0.63
PDPN-210ENST00000513143 SOWAHCQ53LP3 525 aaPredicted RBP11.13□□□□□ -0.63
PDPN-210ENST00000513143 ZNF362Q5T0B9 420 aaPredicted RBP11.13□□□□□ -0.63
PDPN-210ENST00000513143 SLC35F1Q5T1Q4 408 aa11.13□□□□□ -0.63
PDPN-210ENST00000513143 C6orf52Q5T4I8 152 aa11.13□□□□□ -0.63
PDPN-210ENST00000513143 EEF1A1P5Q5VTE0 462 aa11.13□□□□□ -0.63
PDPN-210ENST00000513143 FAM205BPQ63HN1 556 aa11.13□□□□□ -0.63
PDPN-210ENST00000513143 OR2A2Q6IF42 318 aa11.13□□□□□ -0.63
PDPN-210ENST00000513143 B3GNT6Q6ZMB0 384 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms