RNA–Protein interactions for RNA: ENST00000512590.6

VCAN-208, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 5,923 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-208ENST00000512590 ZNF658BQ4V348 819 aaPredicted RBP8.27□□□□□ -1.09
VCAN-208ENST00000512590 YIF1BQ5BJH7 314 aa8.27□□□□□ -1.09
VCAN-208ENST00000512590 MEPCEQ7L2J0 689 aaKnown RBP8.27□□□□□ -1.09
VCAN-208ENST00000512590 OR51L1Q8NGJ5 315 aa8.27□□□□□ -1.09
VCAN-208ENST00000512590 ZNF486Q96H40 463 aaPredicted RBP8.27□□□□□ -1.09
VCAN-208ENST00000512590 SNX22Q96L94 193 aa8.27□□□□□ -1.09
VCAN-208ENST00000512590 KCNK17Q96T54 332 aa8.27□□□□□ -1.09
VCAN-208ENST00000512590 ZNF331Q9NQX6 463 aaPredicted RBP8.27□□□□□ -1.09
VCAN-208ENST00000512590 SLC2A6Q9UGQ3 507 aa8.27□□□□□ -1.09
VCAN-208ENST00000512590 SLURP2P0DP57 97 aa8.27□□□□□ -1.09
VCAN-208ENST00000512590 NUBP1P53384 320 aa8.27□□□□□ -1.09
VCAN-208ENST00000512590 FADDQ13158 208 aa8.27□□□□□ -1.09
VCAN-208ENST00000512590 PHYHD1Q5SRE7 291 aa8.27□□□□□ -1.09
VCAN-208ENST00000512590 NRMQ8IXM6 262 aa8.27□□□□□ -1.09
VCAN-208ENST00000512590 ACBD7Q8N6N7 88 aa8.27□□□□□ -1.09
VCAN-208ENST00000512590 ZNF337Q9Y3M9 751 aa8.27□□□□□ -1.09
VCAN-208ENST00000512590 MEIKINA0A087WXM9 373 aa8.27□□□□□ -1.09
VCAN-208ENST00000512590 COX7A2P2O60397 106 aa8.27□□□□□ -1.09
VCAN-208ENST00000512590 NSA2O95478 260 aaKnown RBP8.27□□□□□ -1.09
VCAN-208ENST00000512590 HPNP05981 417 aa8.27□□□□□ -1.09
VCAN-208ENST00000512590 CD48P09326 243 aa8.27□□□□□ -1.09
VCAN-208ENST00000512590 RAB1AP62820 205 aa8.27□□□□□ -1.09
VCAN-208ENST00000512590 ZNF385BQ569K4 471 aa8.27□□□□□ -1.09
VCAN-208ENST00000512590 DNAJC5GQ8N7S2 189 aa8.27□□□□□ -1.09
VCAN-208ENST00000512590 SLC35A4Q96G79 324 aa8.27□□□□□ -1.09
VCAN-208ENST00000512590 LIN28AQ9H9Z2 209 aaKnown RBP8.27□□□□□ -1.09
VCAN-208ENST00000512590 SLC35D1Q9NTN3 355 aa8.27□□□□□ -1.09
VCAN-208ENST00000512590 THYN1Q9P016 225 aa8.27□□□□□ -1.09
VCAN-208ENST00000512590 TNFRSF10AO00220 468 aa8.27□□□□□ -1.09
VCAN-208ENST00000512590 CREG1O75629 220 aa8.27□□□□□ -1.09
VCAN-208ENST00000512590 H2AFB2P0C5Z0 115 aa8.27□□□□□ -1.09
VCAN-208ENST00000512590 ATXN1LP0C7T5 689 aaKnown RBP8.27□□□□□ -1.09
VCAN-208ENST00000512590 UGT2B7P16662 529 aa8.27□□□□□ -1.09
VCAN-208ENST00000512590 FPR1P21462 350 aa8.27□□□□□ -1.09
VCAN-208ENST00000512590 PRSS3P35030 304 aa8.27□□□□□ -1.09
VCAN-208ENST00000512590 CDKN2CP42773 168 aa8.27□□□□□ -1.09
VCAN-208ENST00000512590 STC1P52823 247 aa8.27□□□□□ -1.09
VCAN-208ENST00000512590 HES3Q5TGS1 186 aa8.27□□□□□ -1.09
VCAN-208ENST00000512590 COX15Q7KZN9 410 aa8.27□□□□□ -1.09
VCAN-208ENST00000512590 OSTM1Q86WC4 334 aa8.27□□□□□ -1.09
VCAN-208ENST00000512590 TEX26Q8N6G2 289 aa8.27□□□□□ -1.09
VCAN-208ENST00000512590 SDR9C7Q8NEX9 313 aa8.27□□□□□ -1.09
VCAN-208ENST00000512590 OR2AK2Q8NG84 335 aa8.27□□□□□ -1.09
VCAN-208ENST00000512590 OLIG1Q8TAK6 271 aa8.27□□□□□ -1.09
VCAN-208ENST00000512590 HHLA2Q9UM44 414 aa8.27□□□□□ -1.09
VCAN-208ENST00000512590 OR4E1P0C645 316 aa8.26□□□□□ -1.09
VCAN-208ENST00000512590 PPP2CBP62714 309 aa8.26□□□□□ -1.09
VCAN-208ENST00000512590 IZUMO4Q1ZYL8 232 aa8.26□□□□□ -1.09
VCAN-208ENST00000512590 CMPK2Q5EBM0 449 aa8.26□□□□□ -1.09
VCAN-208ENST00000512590 CLEC14AQ86T13 490 aa8.26□□□□□ -1.09
VCAN-208ENST00000512590 SLC39A11Q8N1S5 342 aa8.26□□□□□ -1.09
VCAN-208ENST00000512590 CHDHQ8NE62 594 aaPredicted RBP8.26□□□□□ -1.09
VCAN-208ENST00000512590 OR10J5Q8NHC4 309 aa8.26□□□□□ -1.09
VCAN-208ENST00000512590 CD200R1Q8TD46 325 aa8.26□□□□□ -1.09
VCAN-208ENST00000512590 NETO1Q8TDF5 533 aa8.26□□□□□ -1.09
VCAN-208ENST00000512590 HAVCR2Q8TDQ0 301 aa8.26□□□□□ -1.09
VCAN-208ENST00000512590 STON2Q8WXE9 905 aa8.26□□□□□ -1.09
VCAN-208ENST00000512590 PIK3IP1Q96FE7 263 aa8.26□□□□□ -1.09
VCAN-208ENST00000512590 PLEKHF2Q9H8W4 249 aa8.26□□□□□ -1.09
VCAN-208ENST00000512590 OR6C2Q9NZP2 312 aa8.26□□□□□ -1.09
VCAN-208ENST00000512590 AQP7P3A6NL99 342 aa8.26□□□□□ -1.09
VCAN-208ENST00000512590 ADAM11O75078 769 aa8.26□□□□□ -1.09
VCAN-208ENST00000512590 AADACP22760 399 aa8.26□□□□□ -1.09
VCAN-208ENST00000512590 GGT5P36269 586 aa8.26□□□□□ -1.09
VCAN-208ENST00000512590 OR3A4PP47883 348 aa8.26□□□□□ -1.09
VCAN-208ENST00000512590 PTTG1IPP53801 180 aa8.26□□□□□ -1.09
VCAN-208ENST00000512590 SELPLGQ14242 412 aa8.26□□□□□ -1.09
VCAN-208ENST00000512590 ZNF74Q16587 644 aa8.26□□□□□ -1.09
VCAN-208ENST00000512590 TIGITQ495A1 244 aa8.26□□□□□ -1.09
VCAN-208ENST00000512590 PLAC9Q5JTB6 97 aa8.26□□□□□ -1.09
VCAN-208ENST00000512590 MAMDC4Q6UXC1 1216 aa8.26□□□□□ -1.09
VCAN-208ENST00000512590 ZNF793Q6ZN11 406 aa8.26□□□□□ -1.09
VCAN-208ENST00000512590 SPEM1Q8N4L4 309 aa8.26□□□□□ -1.09
VCAN-208ENST00000512590 OR13C8Q8NGS7 320 aa8.26□□□□□ -1.09
VCAN-208ENST00000512590 ABHD6Q9BV23 337 aa8.26□□□□□ -1.09
VCAN-208ENST00000512590 DDX31Q9H8H2 851 aaKnown RBP8.26□□□□□ -1.09
VCAN-208ENST00000512590 RAB6AP20340 208 aa8.26□□□□□ -1.09
VCAN-208ENST00000512590 ADAM17P78536 824 aa8.26□□□□□ -1.09
VCAN-208ENST00000512590 SPOCK1Q08629 439 aa8.26□□□□□ -1.09
VCAN-208ENST00000512590 GTPBP8Q8N3Z3 284 aaPredicted RBP8.26□□□□□ -1.09
VCAN-208ENST00000512590 OR2AE1Q8NHA4 323 aa8.26□□□□□ -1.09
VCAN-208ENST00000512590 TFAP2BQ92481 460 aa8.26□□□□□ -1.09
VCAN-208ENST00000512590 CDS1Q92903 461 aa8.26□□□□□ -1.09
VCAN-208ENST00000512590 LRFN3Q9BTN0 628 aa8.26□□□□□ -1.09
VCAN-208ENST00000512590 DTLQ9NZJ0 730 aa8.26□□□□□ -1.09
VCAN-208ENST00000512590 C5orf49A4QMS7 147 aa8.26□□□□□ -1.09
VCAN-208ENST00000512590 HRO43593 1189 aa8.26□□□□□ -1.09
VCAN-208ENST00000512590 GATCO43716 136 aaKnown RBP8.26□□□□□ -1.09
VCAN-208ENST00000512590 DXOO77932 396 aaKnown RBP8.26□□□□□ -1.09
VCAN-208ENST00000512590 SNAI1O95863 264 aaPredicted RBP8.26□□□□□ -1.09
VCAN-208ENST00000512590 RNASE1P07998 156 aaKnown RBP8.26□□□□□ -1.09
VCAN-208ENST00000512590 FBP1P09467 338 aa8.26□□□□□ -1.09
VCAN-208ENST00000512590 IL4RP24394 825 aa8.26□□□□□ -1.09
VCAN-208ENST00000512590 TRHRP34981 398 aaPredicted RBP8.26□□□□□ -1.09
VCAN-208ENST00000512590 STT3AP46977 705 aa8.26□□□□□ -1.09
VCAN-208ENST00000512590 OR1C1Q15619 314 aa8.26□□□□□ -1.09
VCAN-208ENST00000512590 PCGF3Q3KNV8 242 aa8.26□□□□□ -1.09
VCAN-208ENST00000512590 RAB6CQ53S08 254 aa8.26□□□□□ -1.09
VCAN-208ENST00000512590 AMMECR1LQ6DCA0 310 aa8.26□□□□□ -1.09
VCAN-208ENST00000512590 C1GALT1Q9NS00 363 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms