RNA–Protein interactions for RNA: ENST00000511978.5

MATR3-218, Transcript of matrin 3, human

TSL 3

Gene MATR3, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MATR3-218	ENST00000511978	TNFSF10	P50591	281 aa		4.63	□□□□□ -1.67
MATR3-218	ENST00000511978	CDH11	P55287	796 aa		4.63	□□□□□ -1.67
MATR3-218	ENST00000511978	CX3CL1	P78423	397 aa		4.63	□□□□□ -1.67
MATR3-218	ENST00000511978	SNTB1	Q13884	538 aa	Known RBP	4.63	□□□□□ -1.67
MATR3-218	ENST00000511978	IMPG1	Q17R60	797 aa		4.63	□□□□□ -1.67
MATR3-218	ENST00000511978	SPIN4	Q56A73	249 aa		4.63	□□□□□ -1.67
MATR3-218	ENST00000511978	TNFAIP8L3	Q5GJ75	292 aa		4.63	□□□□□ -1.67
MATR3-218	ENST00000511978	BEND6	Q5SZJ8	279 aa	Predicted RBP	4.63	□□□□□ -1.67
MATR3-218	ENST00000511978	H3F3C	Q6NXT2	135 aa		4.63	□□□□□ -1.67
MATR3-218	ENST00000511978	SCIMP	Q6UWF3	145 aa		4.63	□□□□□ -1.67
MATR3-218	ENST00000511978	DGAT2L6	Q6ZPD8	337 aa		4.63	□□□□□ -1.67
MATR3-218	ENST00000511978	KRT74	Q7RTS7	529 aa		4.63	□□□□□ -1.67
MATR3-218	ENST00000511978	CAMKMT	Q7Z624	323 aa		4.63	□□□□□ -1.67
MATR3-218	ENST00000511978	RPS19BP1	Q86WX3	136 aa	Known RBP	4.63	□□□□□ -1.67
MATR3-218	ENST00000511978	COMMD2	Q86X83	199 aa		4.63	□□□□□ -1.67
MATR3-218	ENST00000511978	ST13P4	Q8IZP2	240 aa	Predicted RBP	4.63	□□□□□ -1.67
MATR3-218	ENST00000511978	IQCK	Q8N0W5	287 aa		4.63	□□□□□ -1.67
MATR3-218	ENST00000511978	GBP7	Q8N8V2	638 aa	Predicted RBP	4.63	□□□□□ -1.67
MATR3-218	ENST00000511978	MORN4	Q8NDC4	146 aa		4.63	□□□□□ -1.67
MATR3-218	ENST00000511978	CATSPER1	Q8NEC5	780 aa		4.63	□□□□□ -1.67
MATR3-218	ENST00000511978	OR1J1	Q8NGS3	322 aa		4.63	□□□□□ -1.67
MATR3-218	ENST00000511978	FAM76A	Q8TAV0	307 aa		4.63	□□□□□ -1.67
MATR3-218	ENST00000511978	AGR3	Q8TD06	166 aa		4.63	□□□□□ -1.67
MATR3-218	ENST00000511978	UCN3	Q969E3	161 aa		4.63	□□□□□ -1.67
MATR3-218	ENST00000511978	SPDL1	Q96EA4	605 aa		4.63	□□□□□ -1.67
MATR3-218	ENST00000511978	FBXO17	Q96EF6	278 aa		4.63	□□□□□ -1.67
MATR3-218	ENST00000511978	PKNOX2	Q96KN3	472 aa		4.63	□□□□□ -1.67
MATR3-218	ENST00000511978	NPAS2	Q99743	824 aa		4.63	□□□□□ -1.67
MATR3-218	ENST00000511978	PELO	Q9BRX2	385 aa	Known RBP	4.63	□□□□□ -1.67
MATR3-218	ENST00000511978	FAIM2	Q9BWQ8	316 aa		4.63	□□□□□ -1.67
MATR3-218	ENST00000511978	OR8D2	Q9GZM6	311 aa		4.63	□□□□□ -1.67
MATR3-218	ENST00000511978	STMN4	Q9H169	189 aa	Predicted RBP	4.63	□□□□□ -1.67
MATR3-218	ENST00000511978	OPA3	Q9H6K4	179 aa		4.63	□□□□□ -1.67
MATR3-218	ENST00000511978	EML4	Q9HC35	981 aa	Known RBP	4.63	□□□□□ -1.67
MATR3-218	ENST00000511978	SLC52A3	Q9NQ40	469 aa		4.63	□□□□□ -1.67
MATR3-218	ENST00000511978	RRAGD	Q9NQL2	400 aa	Predicted RBP	4.63	□□□□□ -1.67
MATR3-218	ENST00000511978	NMRK1	Q9NWW6	199 aa		4.63	□□□□□ -1.67
MATR3-218	ENST00000511978	STMN3	Q9NZ72	180 aa		4.63	□□□□□ -1.67
MATR3-218	ENST00000511978	B3GAT1	Q9P2W7	334 aa		4.63	□□□□□ -1.67
MATR3-218	ENST00000511978	COPS7A	Q9UBW8	275 aa		4.63	□□□□□ -1.67
MATR3-218	ENST00000511978	FIS1	Q9Y3D6	152 aa		4.63	□□□□□ -1.67
MATR3-218	ENST00000511978	CLCA3P	Q9Y6N3	262 aa		4.63	□□□□□ -1.67
MATR3-218	ENST00000511978	CFAP46	Q8IYW2	2715 aa		4.63	□□□□□ -1.67
MATR3-218	ENST00000511978	PIEZO2	Q9H5I5	2752 aa		4.63	□□□□□ -1.67
MATR3-218	ENST00000511978	SEC16A	O15027	2179 aa		4.63	□□□□□ -1.67
MATR3-218	ENST00000511978	COL6A6	A6NMZ7	2263 aa		4.62	□□□□□ -1.67
MATR3-218	ENST00000511978	SCN2A	Q99250	2005 aa		4.62	□□□□□ -1.67
MATR3-218	ENST00000511978	WASHC1	A8K0Z3	465 aa		4.62	□□□□□ -1.67
MATR3-218	ENST00000511978	TMEM114	B3SHH9	223 aa		4.62	□□□□□ -1.67
MATR3-218	ENST00000511978	PLOD2	O00469	737 aa		4.62	□□□□□ -1.67
MATR3-218	ENST00000511978	AZIN1	O14977	448 aa		4.62	□□□□□ -1.67
MATR3-218	ENST00000511978	PGRMC2	O15173	223 aa		4.62	□□□□□ -1.67
MATR3-218	ENST00000511978	TM9SF1	O15321	606 aa		4.62	□□□□□ -1.67
MATR3-218	ENST00000511978	GPR75	O95800	540 aa		4.62	□□□□□ -1.67
MATR3-218	ENST00000511978	CLPS	P04118	112 aa		4.62	□□□□□ -1.67
MATR3-218	ENST00000511978	IL3	P08700	152 aa		4.62	□□□□□ -1.67
MATR3-218	ENST00000511978	PATE4	P0C8F1	98 aa		4.62	□□□□□ -1.67
MATR3-218	ENST00000511978	SLC35E2	P0CK97	266 aa		4.62	□□□□□ -1.67
MATR3-218	ENST00000511978	NEFH	P12036	1026 aa		4.62	□□□□□ -1.67
MATR3-218	ENST00000511978	SERPINB5	P36952	375 aa		4.62	□□□□□ -1.67
MATR3-218	ENST00000511978	UQCRFS1	P47985	274 aa		4.62	□□□□□ -1.67
MATR3-218	ENST00000511978	CYB561	P49447	251 aa		4.62	□□□□□ -1.67
MATR3-218	ENST00000511978	MLF1	P58340	268 aa		4.62	□□□□□ -1.67
MATR3-218	ENST00000511978	TRA2B	P62995	288 aa	Known RBP	4.62	□□□□□ -1.67
MATR3-218	ENST00000511978	ERVK-8	P63133	956 aa		4.62	□□□□□ -1.67
MATR3-218	ENST00000511978	RPL38	P63173	70 aa	Known RBP	4.62	□□□□□ -1.67
MATR3-218	ENST00000511978	ZNF763	Q0D2J5	394 aa		4.62	□□□□□ -1.67
MATR3-218	ENST00000511978	CASP8	Q14790	479 aa		4.62	□□□□□ -1.67
MATR3-218	ENST00000511978	OR1C1	Q15619	314 aa		4.62	□□□□□ -1.67
MATR3-218	ENST00000511978	CHI3L2	Q15782	390 aa		4.62	□□□□□ -1.67
MATR3-218	ENST00000511978	IGFBP7	Q16270	282 aa		4.62	□□□□□ -1.67
MATR3-218	ENST00000511978	INA	Q16352	499 aa		4.62	□□□□□ -1.67
MATR3-218	ENST00000511978	C9orf152	Q5JTZ5	239 aa		4.62	□□□□□ -1.67
MATR3-218	ENST00000511978	C6orf163	Q5TEZ5	329 aa		4.62	□□□□□ -1.67
MATR3-218	ENST00000511978	SLC48A1	Q6P1K1	146 aa		4.62	□□□□□ -1.67
MATR3-218	ENST00000511978	RNF165	Q6ZSG1	346 aa		4.62	□□□□□ -1.67
MATR3-218	ENST00000511978	C9orf40	Q8IXQ3	194 aa		4.62	□□□□□ -1.67
MATR3-218	ENST00000511978	ARHGAP24	Q8N264	748 aa		4.62	□□□□□ -1.67
MATR3-218	ENST00000511978	ZNF321P	Q8N8H1	164 aa		4.62	□□□□□ -1.67
MATR3-218	ENST00000511978	MDS2	Q8NDY4	140 aa		4.62	□□□□□ -1.67
MATR3-218	ENST00000511978	OR8K3	Q8NH51	312 aa		4.62	□□□□□ -1.67
MATR3-218	ENST00000511978	CDC26	Q8NHZ8	85 aa		4.62	□□□□□ -1.67
MATR3-218	ENST00000511978	DOK4	Q8TEW6	326 aa		4.62	□□□□□ -1.67
MATR3-218	ENST00000511978	ZNF721	Q8TF20	911 aa		4.62	□□□□□ -1.67
MATR3-218	ENST00000511978	TWIST2	Q8WVJ9	160 aa		4.62	□□□□□ -1.67
MATR3-218	ENST00000511978	HAS2	Q92819	552 aa		4.62	□□□□□ -1.67
MATR3-218	ENST00000511978	RIT1	Q92963	219 aa		4.62	□□□□□ -1.67
MATR3-218	ENST00000511978	PPWD1	Q96BP3	646 aa	Known RBP	4.62	□□□□□ -1.67
MATR3-218	ENST00000511978	SNRNP40	Q96DI7	357 aa	Known RBP	4.62	□□□□□ -1.67
MATR3-218	ENST00000511978	ARSG	Q96EG1	525 aa		4.62	□□□□□ -1.67
MATR3-218	ENST00000511978	RBM18	Q96H35	190 aa	Known RBP	4.62	□□□□□ -1.67
MATR3-218	ENST00000511978	ART5	Q96L15	291 aa		4.62	□□□□□ -1.67
MATR3-218	ENST00000511978	SIGLEC12	Q96PQ1	595 aa		4.62	□□□□□ -1.67
MATR3-218	ENST00000511978	GAL3ST4	Q96RP7	486 aa		4.62	□□□□□ -1.67
MATR3-218	ENST00000511978	UTP23	Q9BRU9	249 aa	Known RBP	4.62	□□□□□ -1.67
MATR3-218	ENST00000511978	DEFB126	Q9BYW3	111 aa		4.62	□□□□□ -1.67
MATR3-218	ENST00000511978	ZNF696	Q9H7X3	374 aa		4.62	□□□□□ -1.67
MATR3-218	ENST00000511978	A4GALT	Q9NPC4	353 aa		4.62	□□□□□ -1.67
MATR3-218	ENST00000511978	ARGLU1	Q9NWB6	273 aa	Predicted RBP	4.62	□□□□□ -1.67
MATR3-218	ENST00000511978	ERVK-19	Q9WJR5	959 aa		4.62	□□□□□ -1.67

Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms