RNA–Protein interactions for RNA: ENST00000511859.5

RNF4-216, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 1,373 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-216ENST00000511859 OR2T11Q8NH01 316 aa9.87□□□□□ -0.83
RNF4-216ENST00000511859 OR5AK3PQ8NH89 298 aa9.87□□□□□ -0.83
RNF4-216ENST00000511859 TWIST2Q8WVJ9 160 aa9.87□□□□□ -0.83
RNF4-216ENST00000511859 RAB1CQ92928 201 aa9.87□□□□□ -0.83
RNF4-216ENST00000511859 RAB8BQ92930 207 aa9.87□□□□□ -0.83
RNF4-216ENST00000511859 COQ8BQ96D53 544 aa9.87□□□□□ -0.83
RNF4-216ENST00000511859 THOC1Q96FV9 657 aaKnown RBP9.87□□□□□ -0.83
RNF4-216ENST00000511859 MAGEB18Q96M61 343 aa9.87□□□□□ -0.83
RNF4-216ENST00000511859 TUBB1Q9H4B7 451 aa9.87□□□□□ -0.83
RNF4-216ENST00000511859 DENND2DQ9H6A0 471 aaPredicted RBP9.87□□□□□ -0.83
RNF4-216ENST00000511859 THAP1Q9NVV9 213 aa9.87□□□□□ -0.83
RNF4-216ENST00000511859 B3GNT2Q9NY97 397 aa9.87□□□□□ -0.83
RNF4-216ENST00000511859 NKIRAS2Q9NYR9 191 aa9.87□□□□□ -0.83
RNF4-216ENST00000511859 ZNF69Q9UC07 566 aa9.87□□□□□ -0.83
RNF4-216ENST00000511859 GIMAP2Q9UG22 337 aa9.87□□□□□ -0.83
RNF4-216ENST00000511859 DUSP13Q9UII6 198 aa9.87□□□□□ -0.83
RNF4-216ENST00000511859 RASD1Q9Y272 281 aa9.87□□□□□ -0.83
RNF4-216ENST00000511859 DNAJC15Q9Y5T4 150 aa9.87□□□□□ -0.83
RNF4-216ENST00000511859 DOCK11Q5JSL3 2073 aa9.86□□□□□ -0.83
RNF4-216ENST00000511859 ZNF503-AS2A6NEH8 195 aa9.86□□□□□ -0.83
RNF4-216ENST00000511859 C17orf100A8MU93 164 aa9.86□□□□□ -0.83
RNF4-216ENST00000511859 LSM1O15116 133 aaKnown RBP9.86□□□□□ -0.83
RNF4-216ENST00000511859 CDC14BO60729 498 aa9.86□□□□□ -0.83
RNF4-216ENST00000511859 CHEK2O96017 543 aa9.86□□□□□ -0.83
RNF4-216ENST00000511859 KNG1P01042 644 aa9.86□□□□□ -0.83
RNF4-216ENST00000511859 CHRM4P08173 479 aa9.86□□□□□ -0.83
RNF4-216ENST00000511859 UQCRBP14927 111 aa9.86□□□□□ -0.83
RNF4-216ENST00000511859 CXCR1P25024 350 aa9.86□□□□□ -0.83
RNF4-216ENST00000511859 MAPK1P28482 360 aa9.86□□□□□ -0.83
RNF4-216ENST00000511859 MDH1P40925 334 aaKnown RBP9.86□□□□□ -0.83
RNF4-216ENST00000511859 MAGEB1P43366 347 aa9.86□□□□□ -0.83
RNF4-216ENST00000511859 RPL14P50914 215 aaKnown RBP9.86□□□□□ -0.83
RNF4-216ENST00000511859 SELENOVP59797 346 aa9.86□□□□□ -0.83
RNF4-216ENST00000511859 RPS26P62854 115 aaKnown RBP9.86□□□□□ -0.83
RNF4-216ENST00000511859 SF3A3Q12874 501 aaKnown RBP eCLIP9.86□□□□□ -0.83
RNF4-216ENST00000511859 MAD2L1BPQ15013 274 aaPredicted RBP9.86□□□□□ -0.83
RNF4-216ENST00000511859 FXNQ16595 210 aa9.86□□□□□ -0.83
RNF4-216ENST00000511859 UGT3A2Q3SY77 523 aa9.86□□□□□ -0.83
RNF4-216ENST00000511859 GALNTL6Q49A17 601 aa9.86□□□□□ -0.83
RNF4-216ENST00000511859 ARMCX4Q5H9R4 360 aa9.86□□□□□ -0.83
RNF4-216ENST00000511859 ATAD3BQ5T9A4 648 aa9.86□□□□□ -0.83
RNF4-216ENST00000511859 PRAMEF8Q5VWM4 474 aa9.86□□□□□ -0.83
RNF4-216ENST00000511859 PRAMEF7Q5VXH5 474 aa9.86□□□□□ -0.83
RNF4-216ENST00000511859 ZG16BQ96DA0 208 aa9.86□□□□□ -0.83
RNF4-216ENST00000511859 TIMD4Q96H15 378 aa9.86□□□□□ -0.83
RNF4-216ENST00000511859 CITED1Q99966 193 aa9.86□□□□□ -0.83
RNF4-216ENST00000511859 RSPO3Q9BXY4 272 aaPredicted RBP9.86□□□□□ -0.83
RNF4-216ENST00000511859 BEX1Q9HBH7 125 aa9.86□□□□□ -0.83
RNF4-216ENST00000511859 GPR35Q9HC97 309 aa9.86□□□□□ -0.83
RNF4-216ENST00000511859 ADPRHL2Q9NX46 363 aa9.86□□□□□ -0.83
RNF4-216ENST00000511859 MYEF2Q9P2K5 600 aaKnown RBP9.86□□□□□ -0.83
RNF4-216ENST00000511859 RCE1Q9Y256 329 aa9.86□□□□□ -0.83
RNF4-216ENST00000511859 WIPI2Q9Y4P8 454 aa9.86□□□□□ -0.83
RNF4-216ENST00000511859 A0A1W2PPW3 197 aa9.85□□□□□ -0.83
RNF4-216ENST00000511859 ZNF99A8MXY4 864 aaPredicted RBP9.85□□□□□ -0.83
RNF4-216ENST00000511859 CLDN25C9JDP6 229 aa9.85□□□□□ -0.83
RNF4-216ENST00000511859 SLC43A1O75387 559 aa9.85□□□□□ -0.83
RNF4-216ENST00000511859 FOXH1O75593 365 aa9.85□□□□□ -0.83
RNF4-216ENST00000511859 FGF4P08620 206 aa9.85□□□□□ -0.83
RNF4-216ENST00000511859 ZNF14P17017 642 aaPredicted RBP9.85□□□□□ -0.83
RNF4-216ENST00000511859 MTNR1AP48039 350 aa9.85□□□□□ -0.83
RNF4-216ENST00000511859 HBA1P69905 142 aa9.85□□□□□ -0.83
RNF4-216ENST00000511859 CCL8P80075 99 aa9.85□□□□□ -0.83
RNF4-216ENST00000511859 NKPD1Q17RQ9 610 aa9.85□□□□□ -0.83
RNF4-216ENST00000511859 GSG1Q2KHT4 349 aa9.85□□□□□ -0.83
RNF4-216ENST00000511859 CEACAM16Q2WEN9 425 aa9.85□□□□□ -0.83
RNF4-216ENST00000511859 TMEM154Q6P9G4 183 aa9.85□□□□□ -0.83
RNF4-216ENST00000511859 OLIG3Q7RTU3 272 aa9.85□□□□□ -0.83
RNF4-216ENST00000511859 WDFY1Q8IWB7 410 aa9.85□□□□□ -0.83
RNF4-216ENST00000511859 BCL6BQ8N143 479 aaPredicted RBP9.85□□□□□ -0.83
RNF4-216ENST00000511859 GPR137CQ8N3F9 429 aa9.85□□□□□ -0.83
RNF4-216ENST00000511859 MIPOL1Q8TD10 442 aa9.85□□□□□ -0.83
RNF4-216ENST00000511859 XAGE5Q8WWM1 108 aa9.85□□□□□ -0.83
RNF4-216ENST00000511859 UBE2FQ969M7 185 aa9.85□□□□□ -0.83
RNF4-216ENST00000511859 C3orf30Q96M34 536 aa9.85□□□□□ -0.83
RNF4-216ENST00000511859 ZNF48Q96MX3 618 aaPredicted RBP9.85□□□□□ -0.83
RNF4-216ENST00000511859 NUF2Q9BZD4 464 aa9.85□□□□□ -0.83
RNF4-216ENST00000511859 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.85□□□□□ -0.83
RNF4-216ENST00000511859 IGHV1-69-2A0A0G2JMI3 117 aa9.84□□□□□ -0.83
RNF4-216ENST00000511859 SLC22A23A1A5C7 686 aa9.84□□□□□ -0.83
RNF4-216ENST00000511859 CLDN24A6NM45 220 aa9.84□□□□□ -0.83
RNF4-216ENST00000511859 A8MVM7 634 aa9.84□□□□□ -0.83
RNF4-216ENST00000511859 AP3D1O14617 1153 aa9.84□□□□□ -0.83
RNF4-216ENST00000511859 VIMP08670 466 aaKnown RBP9.84□□□□□ -0.83
RNF4-216ENST00000511859 CD79AP11912 226 aa9.84□□□□□ -0.83
RNF4-216ENST00000511859 ZNF43P17038 809 aa9.84□□□□□ -0.83
RNF4-216ENST00000511859 OMGP23515 440 aa9.84□□□□□ -0.83
RNF4-216ENST00000511859 LSP1P33241 339 aa9.84□□□□□ -0.83
RNF4-216ENST00000511859 PCGF2P35227 344 aa9.84□□□□□ -0.83
RNF4-216ENST00000511859 SOAT1P35610 550 aa9.84□□□□□ -0.83
RNF4-216ENST00000511859 CLDN17P56750 224 aa9.84□□□□□ -0.83
RNF4-216ENST00000511859 LCN2P80188 198 aa9.84□□□□□ -0.83
RNF4-216ENST00000511859 SRSF4Q08170 494 aaKnown RBP9.84□□□□□ -0.83
RNF4-216ENST00000511859 HFEQ30201 348 aa9.84□□□□□ -0.83
RNF4-216ENST00000511859 FRRS1Q6ZNA5 592 aa9.84□□□□□ -0.83
RNF4-216ENST00000511859 GLB1L3Q8NCI6 653 aaPredicted RBP9.84□□□□□ -0.83
RNF4-216ENST00000511859 ST7LQ8TDW4 575 aa9.84□□□□□ -0.83
RNF4-216ENST00000511859 SNX33Q8WV41 574 aa9.84□□□□□ -0.83
RNF4-216ENST00000511859 WFDC12Q8WWY7 111 aa9.84□□□□□ -0.83
RNF4-216ENST00000511859 CNOT9Q92600 299 aaKnown RBP9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms