RNA–Protein interactions for RNA: ENST00000508342.5

NEDD4-208, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 7,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-208ENST00000508342 EI24O14681 340 aa2.71□□□□□ -1.98
NEDD4-208ENST00000508342 NOBOXO60393 691 aa2.71□□□□□ -1.98
NEDD4-208ENST00000508342 SLC19A2O60779 497 aa2.71□□□□□ -1.98
NEDD4-208ENST00000508342 UTS2O95399 124 aa2.71□□□□□ -1.98
NEDD4-208ENST00000508342 CH25HO95992 272 aa2.71□□□□□ -1.98
NEDD4-208ENST00000508342 DBHP09172 617 aa2.71□□□□□ -1.98
NEDD4-208ENST00000508342 DAOP14920 347 aa2.71□□□□□ -1.98
NEDD4-208ENST00000508342 GGT1P19440 569 aa2.71□□□□□ -1.98
NEDD4-208ENST00000508342 PCSK6P29122 969 aa2.71□□□□□ -1.98
NEDD4-208ENST00000508342 CCR7P32248 378 aa2.71□□□□□ -1.98
NEDD4-208ENST00000508342 PTGER4P35408 488 aa2.71□□□□□ -1.98
NEDD4-208ENST00000508342 MAGEA6P43360 314 aa2.71□□□□□ -1.98
NEDD4-208ENST00000508342 DAP3P51398 398 aaKnown RBP2.71□□□□□ -1.98
NEDD4-208ENST00000508342 AGFG1P52594 562 aaKnown RBP2.71□□□□□ -1.98
NEDD4-208ENST00000508342 LIM2P55344 173 aa2.71□□□□□ -1.98
NEDD4-208ENST00000508342 LSM3P62310 102 aaKnown RBP2.71□□□□□ -1.98
NEDD4-208ENST00000508342 ZXDBP98169 803 aa2.71□□□□□ -1.98
NEDD4-208ENST00000508342 HMGCS1Q01581 520 aa2.71□□□□□ -1.98
NEDD4-208ENST00000508342 DBPQ10586 325 aaPredicted RBP2.71□□□□□ -1.98
NEDD4-208ENST00000508342 SNTB1Q13884 538 aaKnown RBP2.71□□□□□ -1.98
NEDD4-208ENST00000508342 KCNJ11Q14654 390 aa2.71□□□□□ -1.98
NEDD4-208ENST00000508342 TRAM2Q15035 370 aa2.71□□□□□ -1.98
NEDD4-208ENST00000508342 TYSND1Q2T9J0 566 aa2.71□□□□□ -1.98
NEDD4-208ENST00000508342 SLC36A2Q495M3 483 aa2.71□□□□□ -1.98
NEDD4-208ENST00000508342 RUNDC3AQ59EK9 446 aa2.71□□□□□ -1.98
NEDD4-208ENST00000508342 ACER2Q5QJU3 275 aa2.71□□□□□ -1.98
NEDD4-208ENST00000508342 METTL2BQ6P1Q9 378 aaKnown RBP2.71□□□□□ -1.98
NEDD4-208ENST00000508342 CLEC9AQ6UXN8 241 aa2.71□□□□□ -1.98
NEDD4-208ENST00000508342 AAED1Q7RTV5 226 aa2.71□□□□□ -1.98
NEDD4-208ENST00000508342 SLC16A14Q7RTX9 510 aa2.71□□□□□ -1.98
NEDD4-208ENST00000508342 TRIM46Q7Z4K8 759 aa2.71□□□□□ -1.98
NEDD4-208ENST00000508342 MRPL52Q86TS9 123 aaKnown RBP2.71□□□□□ -1.98
NEDD4-208ENST00000508342 CMTM1Q8IZ96 169 aa2.71□□□□□ -1.98
NEDD4-208ENST00000508342 GCNT2Q8N0V5 402 aa2.71□□□□□ -1.98
NEDD4-208ENST00000508342 CARFQ8N187 725 aa2.71□□□□□ -1.98
NEDD4-208ENST00000508342 FBXW8Q8N3Y1 598 aa2.71□□□□□ -1.98
NEDD4-208ENST00000508342 WDSUB1Q8N9V3 476 aa2.71□□□□□ -1.98
NEDD4-208ENST00000508342 LMNTD1Q8N9Z9 388 aa2.71□□□□□ -1.98
NEDD4-208ENST00000508342 KDF1Q8NAX2 398 aaPredicted RBP2.71□□□□□ -1.98
NEDD4-208ENST00000508342 ZNF680Q8NEM1 530 aa2.71□□□□□ -1.98
NEDD4-208ENST00000508342 AGAP11Q8TF27 550 aa2.71□□□□□ -1.98
NEDD4-208ENST00000508342 CAVIN3Q969G5 261 aa2.71□□□□□ -1.98
NEDD4-208ENST00000508342 FAM46AQ96IP4 442 aaKnown RBP2.71□□□□□ -1.98
NEDD4-208ENST00000508342 ZNF382Q96SR6 550 aa2.71□□□□□ -1.98
NEDD4-208ENST00000508342 RBM4BQ9BQ04 359 aaKnown RBP2.71□□□□□ -1.98
NEDD4-208ENST00000508342 KATNB1Q9BVA0 655 aa2.71□□□□□ -1.98
NEDD4-208ENST00000508342 RBM4Q9BWF3 364 aaKnown RBP2.71□□□□□ -1.98
NEDD4-208ENST00000508342 SHARPINQ9H0F6 387 aa2.71□□□□□ -1.98
NEDD4-208ENST00000508342 ZBTB26Q9HCK0 441 aa2.71□□□□□ -1.98
NEDD4-208ENST00000508342 GSKIPQ9P0R6 139 aa2.71□□□□□ -1.98
NEDD4-208ENST00000508342 PLEKHB1Q9UF11 243 aaPredicted RBP2.71□□□□□ -1.98
NEDD4-208ENST00000508342 ADAMTS20P59510 1910 aa2.71□□□□□ -1.98
NEDD4-208ENST00000508342 CUL9Q8IWT3 2517 aa2.71□□□□□ -1.98
NEDD4-208ENST00000508342 TRPM6Q9BX84 2022 aa2.71□□□□□ -1.98
NEDD4-208ENST00000508342 TCRBV9S1A1TA0A576 114 aa2.71□□□□□ -1.98
NEDD4-208ENST00000508342 PRAMEF27A3QJZ7 478 aa2.71□□□□□ -1.98
NEDD4-208ENST00000508342 NKX2-6A6NCS4 301 aa2.71□□□□□ -1.98
NEDD4-208ENST00000508342 BOLA2-SMG1P6H3BVE0 249 aa2.71□□□□□ -1.98
NEDD4-208ENST00000508342 GFYI3L273 518 aa2.71□□□□□ -1.98
NEDD4-208ENST00000508342 ARNTLO00327 626 aa2.71□□□□□ -1.98
NEDD4-208ENST00000508342 ST8SIA5O15466 376 aa2.71□□□□□ -1.98
NEDD4-208ENST00000508342 ABHD16AO95870 558 aa2.71□□□□□ -1.98
NEDD4-208ENST00000508342 C6orf47O95873 294 aa2.71□□□□□ -1.98
NEDD4-208ENST00000508342 SP1P08047 785 aa2.71□□□□□ -1.98
NEDD4-208ENST00000508342 IL3P08700 152 aa2.71□□□□□ -1.98
NEDD4-208ENST00000508342 FGF5P12034 268 aa2.71□□□□□ -1.98
NEDD4-208ENST00000508342 GNB3P16520 340 aa2.71□□□□□ -1.98
NEDD4-208ENST00000508342 SOX3P41225 446 aa2.71□□□□□ -1.98
NEDD4-208ENST00000508342 SRP9P49458 86 aaKnown RBP2.71□□□□□ -1.98
NEDD4-208ENST00000508342 RGS6P49758 472 aa2.71□□□□□ -1.98
NEDD4-208ENST00000508342 GSK3AP49840 483 aa2.71□□□□□ -1.98
NEDD4-208ENST00000508342 FXYD6P3P58550 94 aa2.71□□□□□ -1.98
NEDD4-208ENST00000508342 TAS2R39P59534 338 aa2.71□□□□□ -1.98
NEDD4-208ENST00000508342 HSF1Q00613 529 aa2.71□□□□□ -1.98
NEDD4-208ENST00000508342 C17orf67Q0P5P2 114 aa2.71□□□□□ -1.98
NEDD4-208ENST00000508342 GANABQ14697 944 aaKnown RBP2.71□□□□□ -1.98
NEDD4-208ENST00000508342 C3AR1Q16581 482 aa2.71□□□□□ -1.98
NEDD4-208ENST00000508342 LTC4SQ16873 150 aa2.71□□□□□ -1.98
NEDD4-208ENST00000508342 FAM131AQ6UXB0 335 aa2.71□□□□□ -1.98
NEDD4-208ENST00000508342 BTNL3Q6UXE8 466 aa2.71□□□□□ -1.98
NEDD4-208ENST00000508342 PIP4P1Q86T03 277 aa2.71□□□□□ -1.98
NEDD4-208ENST00000508342 ZDHHC21Q8IVQ6 265 aa2.71□□□□□ -1.98
NEDD4-208ENST00000508342 KLHL36Q8N4N3 616 aa2.71□□□□□ -1.98
NEDD4-208ENST00000508342 OR2M7Q8NG81 312 aa2.71□□□□□ -1.98
NEDD4-208ENST00000508342 OR11G2Q8NGC1 345 aa2.71□□□□□ -1.98
NEDD4-208ENST00000508342 CORO2AQ92828 525 aa2.71□□□□□ -1.98
NEDD4-208ENST00000508342 LCORQ96JN0 433 aaPredicted RBP2.71□□□□□ -1.98
NEDD4-208ENST00000508342 LRR1Q96L50 414 aa2.71□□□□□ -1.98
NEDD4-208ENST00000508342 DCLRE1CQ96SD1 692 aaKnown RBP2.71□□□□□ -1.98
NEDD4-208ENST00000508342 SLC29A1Q99808 456 aa2.71□□□□□ -1.98
NEDD4-208ENST00000508342 CIB1Q99828 191 aa2.71□□□□□ -1.98
NEDD4-208ENST00000508342 WDR83Q9BRX9 315 aaKnown RBP2.71□□□□□ -1.98
NEDD4-208ENST00000508342 GFOD1Q9NXC2 390 aa2.71□□□□□ -1.98
NEDD4-208ENST00000508342 GIMAP2Q9UG22 337 aa2.71□□□□□ -1.98
NEDD4-208ENST00000508342 FETUBQ9UGM5 382 aa2.71□□□□□ -1.98
NEDD4-208ENST00000508342 CNTN6Q9UQ52 1028 aa2.71□□□□□ -1.98
NEDD4-208ENST00000508342 E7ESA3 106 aa2.71□□□□□ -1.98
NEDD4-208ENST00000508342 H7C1Q1 480 aa2.71□□□□□ -1.98
NEDD4-208ENST00000508342 H7C417 338 aa2.71□□□□□ -1.98
NEDD4-208ENST00000508342 I6L893 689 aaPredicted RBP2.71□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms