RNA–Protein interactions for RNA: ENST00000507533.1

DDR1-260, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 2

Gene DDR1, Length 545 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-260ENST00000507533 ZNF350Q9GZX5 532 aa11.88□□□□□ -0.51
DDR1-260ENST00000507533 NUP214P35658 2090 aaPredicted RBP11.88□□□□□ -0.51
DDR1-260ENST00000507533 LIPT2A6NK58 231 aa11.87□□□□□ -0.51
DDR1-260ENST00000507533 E9PBE3 544 aa11.87□□□□□ -0.51
DDR1-260ENST00000507533 SCN2BO60939 215 aa11.87□□□□□ -0.51
DDR1-260ENST00000507533 RNASE1P07998 156 aaKnown RBP11.87□□□□□ -0.51
DDR1-260ENST00000507533 VIMP08670 466 aaKnown RBP11.87□□□□□ -0.51
DDR1-260ENST00000507533 NAT2P11245 290 aa11.87□□□□□ -0.51
DDR1-260ENST00000507533 MDKP21741 143 aaPredicted RBP11.87□□□□□ -0.51
DDR1-260ENST00000507533 TACR3P29371 465 aa11.87□□□□□ -0.51
DDR1-260ENST00000507533 SOAT1P35610 550 aa11.87□□□□□ -0.51
DDR1-260ENST00000507533 CAPZA2P47755 286 aa11.87□□□□□ -0.51
DDR1-260ENST00000507533 NME5P56597 212 aa11.87□□□□□ -0.51
DDR1-260ENST00000507533 TUSC1Q2TAM9 212 aa11.87□□□□□ -0.51
DDR1-260ENST00000507533 FBLN7Q53RD9 439 aa11.87□□□□□ -0.51
DDR1-260ENST00000507533 OR4F3Q6IEY1 312 aa11.87□□□□□ -0.51
DDR1-260ENST00000507533 LEG1Q6P5S2 330 aa11.87□□□□□ -0.51
DDR1-260ENST00000507533 C16orf62Q7Z3J2 963 aa11.87□□□□□ -0.51
DDR1-260ENST00000507533 TREML1Q86YW5 311 aa11.87□□□□□ -0.51
DDR1-260ENST00000507533 GLB1L3Q8NCI6 653 aaPredicted RBP11.87□□□□□ -0.51
DDR1-260ENST00000507533 SLC25A28Q96A46 364 aa11.87□□□□□ -0.51
DDR1-260ENST00000507533 TEX37Q96LM6 180 aa11.87□□□□□ -0.51
DDR1-260ENST00000507533 ZBTB18Q99592 522 aa11.87□□□□□ -0.51
DDR1-260ENST00000507533 GPA33Q99795 319 aa11.87□□□□□ -0.51
DDR1-260ENST00000507533 LINC00470Q9BZP3 86 aa11.87□□□□□ -0.51
DDR1-260ENST00000507533 ZNF385DQ9H6B1 395 aa11.87□□□□□ -0.51
DDR1-260ENST00000507533 NPHS2Q9NP85 383 aa11.87□□□□□ -0.51
DDR1-260ENST00000507533 EXOSC3Q9NQT5 275 aaKnown RBP11.87□□□□□ -0.51
DDR1-260ENST00000507533 SDR39U1Q9NRG7 319 aaPredicted RBP11.87□□□□□ -0.51
DDR1-260ENST00000507533 FGFR1OP2Q9NVK5 253 aa11.87□□□□□ -0.51
DDR1-260ENST00000507533 ZIM2Q9NZV7 527 aa11.87□□□□□ -0.51
DDR1-260ENST00000507533 MYEF2Q9P2K5 600 aaKnown RBP11.87□□□□□ -0.51
DDR1-260ENST00000507533 FZR1Q9UM11 496 aa11.87□□□□□ -0.51
DDR1-260ENST00000507533 NOX1Q9Y5S8 564 aa11.87□□□□□ -0.51
DDR1-260ENST00000507533 CLDN24A6NM45 220 aa11.86□□□□□ -0.51
DDR1-260ENST00000507533 RNASET2O00584 256 aaKnown RBP11.86□□□□□ -0.51
DDR1-260ENST00000507533 AP3D1O14617 1153 aa11.86□□□□□ -0.51
DDR1-260ENST00000507533 CDC14BO60729 498 aa11.86□□□□□ -0.51
DDR1-260ENST00000507533 SLC22A3O75751 556 aa11.86□□□□□ -0.51
DDR1-260ENST00000507533 IGHV2-5P01817 119 aa11.86□□□□□ -0.51
DDR1-260ENST00000507533 TROVE2P10155 538 aaKnown RBP eCLIP11.86□□□□□ -0.51
DDR1-260ENST00000507533 IL12AP29459 219 aa11.86□□□□□ -0.51
DDR1-260ENST00000507533 S100A3P33764 101 aa11.86□□□□□ -0.51
DDR1-260ENST00000507533 GLRXP35754 106 aa11.86□□□□□ -0.51
DDR1-260ENST00000507533 MRPL19P49406 292 aaKnown RBP11.86□□□□□ -0.51
DDR1-260ENST00000507533 MAP2K6P52564 334 aa11.86□□□□□ -0.51
DDR1-260ENST00000507533 KCNJ10P78508 379 aa11.86□□□□□ -0.51
DDR1-260ENST00000507533 SRSF4Q08170 494 aaKnown RBP11.86□□□□□ -0.51
DDR1-260ENST00000507533 SPANXN4Q5MJ08 99 aa11.86□□□□□ -0.51
DDR1-260ENST00000507533 ANXA8L1Q5VT79 327 aa11.86□□□□□ -0.51
DDR1-260ENST00000507533 AP1ARQ63HQ0 302 aa11.86□□□□□ -0.51
DDR1-260ENST00000507533 TYW3Q6IPR3 259 aaKnown RBP11.86□□□□□ -0.51
DDR1-260ENST00000507533 C6orf120Q7Z4R8 191 aa11.86□□□□□ -0.51
DDR1-260ENST00000507533 HMGN2P46Q86SG4 172 aa11.86□□□□□ -0.51
DDR1-260ENST00000507533 EPHX4Q8IUS5 362 aa11.86□□□□□ -0.51
DDR1-260ENST00000507533 CLEC4FQ8N1N0 589 aa11.86□□□□□ -0.51
DDR1-260ENST00000507533 MIER2Q8N344 545 aa11.86□□□□□ -0.51
DDR1-260ENST00000507533 VPS37AQ8NEZ2 397 aa11.86□□□□□ -0.51
DDR1-260ENST00000507533 OIT3Q8WWZ8 545 aa11.86□□□□□ -0.51
DDR1-260ENST00000507533 CNOT9Q92600 299 aaKnown RBP11.86□□□□□ -0.51
DDR1-260ENST00000507533 ZG16BQ96DA0 208 aa11.86□□□□□ -0.51
DDR1-260ENST00000507533 CCT8L2Q96SF2 557 aa11.86□□□□□ -0.51
DDR1-260ENST00000507533 MMP27Q9H306 513 aa11.86□□□□□ -0.51
DDR1-260ENST00000507533 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.86□□□□□ -0.51
DDR1-260ENST00000507533 EXD2Q9NVH0 621 aa11.86□□□□□ -0.51
DDR1-260ENST00000507533 PDP1Q9P0J1 537 aaPredicted RBP11.86□□□□□ -0.51
DDR1-260ENST00000507533 ZNF69Q9UC07 566 aa11.86□□□□□ -0.51
DDR1-260ENST00000507533 WDR45Q9Y484 360 aa11.86□□□□□ -0.51
DDR1-260ENST00000507533 A0A0G2JND7 137 aa11.85□□□□□ -0.51
DDR1-260ENST00000507533 PRSS51A0A1B0GVH4 220 aa11.85□□□□□ -0.51
DDR1-260ENST00000507533 RPL36A-HNRNPH2H7BZ11 118 aa11.85□□□□□ -0.51
DDR1-260ENST00000507533 VAMP5O95183 116 aa11.85□□□□□ -0.51
DDR1-260ENST00000507533 MAGEB1P43366 347 aa11.85□□□□□ -0.51
DDR1-260ENST00000507533 P2RY4P51582 365 aa11.85□□□□□ -0.51
DDR1-260ENST00000507533 STX1BP61266 288 aa11.85□□□□□ -0.51
DDR1-260ENST00000507533 PLAURQ03405 335 aa11.85□□□□□ -0.51
DDR1-260ENST00000507533 ALKBH6Q3KRA9 238 aa11.85□□□□□ -0.51
DDR1-260ENST00000507533 GLIPR1L2Q4G1C9 344 aa11.85□□□□□ -0.51
DDR1-260ENST00000507533 GKAP1Q5VSY0 366 aaPredicted RBP11.85□□□□□ -0.51
DDR1-260ENST00000507533 CCDC36Q8IYA8 594 aa11.85□□□□□ -0.51
DDR1-260ENST00000507533 CLECL1Q8IZS7 167 aa11.85□□□□□ -0.51
DDR1-260ENST00000507533 BCL6BQ8N143 479 aaPredicted RBP11.85□□□□□ -0.51
DDR1-260ENST00000507533 ANKK1Q8NFD2 765 aa11.85□□□□□ -0.51
DDR1-260ENST00000507533 RAB8BQ92930 207 aa11.85□□□□□ -0.51
DDR1-260ENST00000507533 ADPRHL2Q9NX46 363 aa11.85□□□□□ -0.51
DDR1-260ENST00000507533 DUSP13Q9UII6 198 aa11.85□□□□□ -0.51
DDR1-260ENST00000507533 NUP50Q9UKX7 468 aa11.85□□□□□ -0.51
DDR1-260ENST00000507533 ZNF346Q9UL40 294 aaKnown RBP11.85□□□□□ -0.51
DDR1-260ENST00000507533 RYR3Q15413 4870 aa11.85□□□□□ -0.51
DDR1-260ENST00000507533 A0A1W2PPW3 197 aa11.84□□□□□ -0.51
DDR1-260ENST00000507533 ZNF432O94892 652 aa11.84□□□□□ -0.51
DDR1-260ENST00000507533 IL6P05231 212 aa11.84□□□□□ -0.51
DDR1-260ENST00000507533 ZNF35P13682 527 aa11.84□□□□□ -0.51
DDR1-260ENST00000507533 OMGP23515 440 aa11.84□□□□□ -0.51
DDR1-260ENST00000507533 RAD52P43351 418 aa11.84□□□□□ -0.51
DDR1-260ENST00000507533 ATP4BP51164 291 aa11.84□□□□□ -0.51
DDR1-260ENST00000507533 HBA1P69905 142 aa11.84□□□□□ -0.51
DDR1-260ENST00000507533 LCN2P80188 198 aa11.84□□□□□ -0.51
DDR1-260ENST00000507533 TRMT5Q32P41 509 aaKnown RBP11.84□□□□□ -0.51
DDR1-260ENST00000507533 SAXO2Q658L1 398 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms