RNA–Protein interactions for RNA: ENST00000506965.5

DDX41-206, Transcript of DEAD-box helicase 41, humanhuman

TSL 5

Gene DDX41, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-206ENST00000506965 IL1RL1Q01638 556 aa11.48□□□□□ -0.57
DDX41-206ENST00000506965 PIGFQ07326 219 aa11.48□□□□□ -0.57
DDX41-206ENST00000506965 DAG1Q14118 895 aa11.48□□□□□ -0.57
DDX41-206ENST00000506965 RGNQ15493 299 aa11.48□□□□□ -0.57
DDX41-206ENST00000506965 FXNQ16595 210 aa11.48□□□□□ -0.57
DDX41-206ENST00000506965 TMEM255AQ5JRV8 349 aa11.48□□□□□ -0.57
DDX41-206ENST00000506965 SLC2A7Q6PXP3 512 aa11.48□□□□□ -0.57
DDX41-206ENST00000506965 WDR88Q6ZMY6 472 aa11.48□□□□□ -0.57
DDX41-206ENST00000506965 ZNF627Q7L945 461 aa11.48□□□□□ -0.57
DDX41-206ENST00000506965 TSPYL5Q86VY4 417 aaPredicted RBP11.48□□□□□ -0.57
DDX41-206ENST00000506965 C20orf196Q8IYI0 205 aa11.48□□□□□ -0.57
DDX41-206ENST00000506965 PAQR4Q8N4S7 273 aaPredicted RBP11.48□□□□□ -0.57
DDX41-206ENST00000506965 ZNF540Q8NDQ6 660 aa11.48□□□□□ -0.57
DDX41-206ENST00000506965 ANKK1Q8NFD2 765 aa11.48□□□□□ -0.57
DDX41-206ENST00000506965 LPAR2Q9HBW0 351 aa11.48□□□□□ -0.57
DDX41-206ENST00000506965 BCL2L10Q9HD36 194 aa11.48□□□□□ -0.57
DDX41-206ENST00000506965 SLC52A3Q9NQ40 469 aa11.48□□□□□ -0.57
DDX41-206ENST00000506965 SDR39U1Q9NRG7 319 aaPredicted RBP11.48□□□□□ -0.57
DDX41-206ENST00000506965 A0A096LPI6 279 aa11.47□□□□□ -0.57
DDX41-206ENST00000506965 A0A0G2JPF8 293 aa11.47□□□□□ -0.57
DDX41-206ENST00000506965 LOC102725191A0A1B0GVB3 256 aa11.47□□□□□ -0.57
DDX41-206ENST00000506965 HNRNPCL2B2RXH8 293 aa11.47□□□□□ -0.57
DDX41-206ENST00000506965 HNRNPCL3B7ZW38 293 aa11.47□□□□□ -0.57
DDX41-206ENST00000506965 HDAC3O15379 428 aa11.47□□□□□ -0.57
DDX41-206ENST00000506965 RGS16O15492 202 aaPredicted RBP11.47□□□□□ -0.57
DDX41-206ENST00000506965 HNRNPCL1O60812 293 aaKnown RBP11.47□□□□□ -0.57
DDX41-206ENST00000506965 SLC22A3O75751 556 aa11.47□□□□□ -0.57
DDX41-206ENST00000506965 HNRNPCL4P0DMR1 293 aa11.47□□□□□ -0.57
DDX41-206ENST00000506965 ARR3P36575 388 aa11.47□□□□□ -0.57
DDX41-206ENST00000506965 RBMXP38159 391 aaKnown RBP11.47□□□□□ -0.57
DDX41-206ENST00000506965 COPZ1P61923 177 aa11.47□□□□□ -0.57
DDX41-206ENST00000506965 POU3F1Q03052 451 aaPredicted RBP11.47□□□□□ -0.57
DDX41-206ENST00000506965 RUNX1T1Q06455 604 aa11.47□□□□□ -0.57
DDX41-206ENST00000506965 MFSD13AQ14CX5 517 aa11.47□□□□□ -0.57
DDX41-206ENST00000506965 LARS2Q15031 903 aaKnown RBP11.47□□□□□ -0.57
DDX41-206ENST00000506965 ZNF311Q5JNZ3 666 aa11.47□□□□□ -0.57
DDX41-206ENST00000506965 LIPNQ5VXI9 398 aa11.47□□□□□ -0.57
DDX41-206ENST00000506965 WDR93Q6P2C0 686 aa11.47□□□□□ -0.57
DDX41-206ENST00000506965 FUNDC1Q8IVP5 155 aa11.47□□□□□ -0.57
DDX41-206ENST00000506965 GPR137CQ8N3F9 429 aa11.47□□□□□ -0.57
DDX41-206ENST00000506965 LSMEM1Q8N8F7 131 aa11.47□□□□□ -0.57
DDX41-206ENST00000506965 GTF3AQ92664 365 aaKnown RBP11.47□□□□□ -0.57
DDX41-206ENST00000506965 TSPAN32Q96QS1 320 aa11.47□□□□□ -0.57
DDX41-206ENST00000506965 METTL17Q9H7H0 456 aaPredicted RBP11.47□□□□□ -0.57
DDX41-206ENST00000506965 DYNLRB1Q9NP97 96 aa11.47□□□□□ -0.57
DDX41-206ENST00000506965 A4GALTQ9NPC4 353 aa11.47□□□□□ -0.57
DDX41-206ENST00000506965 A0A087WUJ7 227 aa11.46□□□□□ -0.57
DDX41-206ENST00000506965 AIM2O14862 343 aa11.46□□□□□ -0.57
DDX41-206ENST00000506965 THY1P04216 161 aa11.46□□□□□ -0.57
DDX41-206ENST00000506965 B4GALT1P15291 398 aa11.46□□□□□ -0.57
DDX41-206ENST00000506965 EGR1P18146 543 aa11.46□□□□□ -0.57
DDX41-206ENST00000506965 ANXA11P50995 505 aaKnown RBP11.46□□□□□ -0.57
DDX41-206ENST00000506965 CAMK2DQ13557 499 aa11.46□□□□□ -0.57
DDX41-206ENST00000506965 FAM69AQ5T7M9 428 aa11.46□□□□□ -0.57
DDX41-206ENST00000506965 H1FNTQ75WM6 255 aaPredicted RBP11.46□□□□□ -0.57
DDX41-206ENST00000506965 ANKRD42Q8N9B4 389 aa11.46□□□□□ -0.57
DDX41-206ENST00000506965 GLB1L3Q8NCI6 653 aaPredicted RBP11.46□□□□□ -0.57
DDX41-206ENST00000506965 NFKBIDQ8NI38 313 aa11.46□□□□□ -0.57
DDX41-206ENST00000506965 ANKRD27Q96NW4 1050 aa11.46□□□□□ -0.57
DDX41-206ENST00000506965 ZNF275Q9NSD4 429 aaPredicted RBP11.46□□□□□ -0.57
DDX41-206ENST00000506965 TREM2Q9NZC2 230 aa11.46□□□□□ -0.57
DDX41-206ENST00000506965 CALML5Q9NZT1 146 aa11.46□□□□□ -0.57
DDX41-206ENST00000506965 SPEF1Q9Y4P9 236 aa11.46□□□□□ -0.57
DDX41-206ENST00000506965 TRAV36DV7A0A075B6V5 113 aa11.45□□□□□ -0.58
DDX41-206ENST00000506965 TRBV5-3A0A0A0MS03 114 aa11.45□□□□□ -0.58
DDX41-206ENST00000506965 CLIC1O00299 241 aa11.45□□□□□ -0.58
DDX41-206ENST00000506965 KCNAB3O43448 404 aa11.45□□□□□ -0.58
DDX41-206ENST00000506965 SYNGR3O43761 229 aa11.45□□□□□ -0.58
DDX41-206ENST00000506965 SNUPNO95149 360 aaKnown RBP11.45□□□□□ -0.58
DDX41-206ENST00000506965 LYPD3O95274 346 aa11.45□□□□□ -0.58
DDX41-206ENST00000506965 CLPTM1O96005 669 aa11.45□□□□□ -0.58
DDX41-206ENST00000506965 IL6P05231 212 aa11.45□□□□□ -0.58
DDX41-206ENST00000506965 ARAFP10398 606 aa11.45□□□□□ -0.58
DDX41-206ENST00000506965 NAT2P11245 290 aa11.45□□□□□ -0.58
DDX41-206ENST00000506965 CD79AP11912 226 aa11.45□□□□□ -0.58
DDX41-206ENST00000506965 PAX7P23759 505 aa11.45□□□□□ -0.58
DDX41-206ENST00000506965 SRP14P37108 136 aaKnown RBP11.45□□□□□ -0.58
DDX41-206ENST00000506965 MAGEB1P43366 347 aa11.45□□□□□ -0.58
DDX41-206ENST00000506965 CAPZA2P47755 286 aa11.45□□□□□ -0.58
DDX41-206ENST00000506965 GIPRP48546 466 aa11.45□□□□□ -0.58
DDX41-206ENST00000506965 ERVS71-1P61550 626 aa11.45□□□□□ -0.58
DDX41-206ENST00000506965 LRRC74AQ0VAA2 488 aa11.45□□□□□ -0.58
DDX41-206ENST00000506965 ALKBH6Q3KRA9 238 aa11.45□□□□□ -0.58
DDX41-206ENST00000506965 THSD4Q6ZMP0 1018 aa11.45□□□□□ -0.58
DDX41-206ENST00000506965 ADPRHL1Q8NDY3 354 aa11.45□□□□□ -0.58
DDX41-206ENST00000506965 PIK3C3Q8NEB9 887 aa11.45□□□□□ -0.58
DDX41-206ENST00000506965 SLC38A4Q969I6 547 aa11.45□□□□□ -0.58
DDX41-206ENST00000506965 SLC35B4Q969S0 331 aa11.45□□□□□ -0.58
DDX41-206ENST00000506965 TMEM186Q96B77 213 aa11.45□□□□□ -0.58
DDX41-206ENST00000506965 C12orf10Q9HB07 376 aa11.45□□□□□ -0.58
DDX41-206ENST00000506965 KCNK9Q9NPC2 374 aa11.45□□□□□ -0.58
DDX41-206ENST00000506965 G6PC2Q9NQR9 355 aa11.45□□□□□ -0.58
DDX41-206ENST00000506965 HIF1ANQ9NWT6 349 aa11.45□□□□□ -0.58
DDX41-206ENST00000506965 ZIM2Q9NZV7 527 aa11.45□□□□□ -0.58
DDX41-206ENST00000506965 REV1Q9UBZ9 1251 aa11.45□□□□□ -0.58
DDX41-206ENST00000506965 PRDM4Q9UKN5 801 aa11.45□□□□□ -0.58
DDX41-206ENST00000506965 USP22Q9UPT9 525 aa11.45□□□□□ -0.58
DDX41-206ENST00000506965 CMAHPQ9Y471 501 aa11.45□□□□□ -0.58
DDX41-206ENST00000506965 A0A0B4J2E0 115 aa11.44□□□□□ -0.58
DDX41-206ENST00000506965 A0A1B0GX12 115 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms