RNA–Protein interactions for RNA: ENST00000506690.1

SQSTM1-211, Transcript of sequestosome 1, humanhuman

TSL 2

Gene SQSTM1, Length 2,405 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-211ENST00000506690 H0YC42 278 aa15.61■□□□□ 0.09
SQSTM1-211ENST00000506690 PSMD9O00233 223 aa15.61■□□□□ 0.09
SQSTM1-211ENST00000506690 NGFRP08138 427 aa15.61■□□□□ 0.09
SQSTM1-211ENST00000506690 KCNJ3P48549 501 aa15.61■□□□□ 0.09
SQSTM1-211ENST00000506690 AKR1C2P52895 323 aa15.61■□□□□ 0.09
SQSTM1-211ENST00000506690 AKR1C1Q04828 323 aa15.61■□□□□ 0.09
SQSTM1-211ENST00000506690 YOD1Q5VVQ6 348 aaPredicted RBP15.61■□□□□ 0.09
SQSTM1-211ENST00000506690 STEAP2Q8NFT2 490 aa15.61■□□□□ 0.09
SQSTM1-211ENST00000506690 GRHL3Q8TE85 626 aa15.61■□□□□ 0.09
SQSTM1-211ENST00000506690 COL26A1Q96A83 441 aa15.61■□□□□ 0.09
SQSTM1-211ENST00000506690 FBXO34Q9NWN3 711 aa15.61■□□□□ 0.09
SQSTM1-211ENST00000506690 ZNF629Q9UEG4 869 aaPredicted RBP15.61■□□□□ 0.09
SQSTM1-211ENST00000506690 APOBEC3BQ9UH17 382 aaKnown RBP15.61■□□□□ 0.09
SQSTM1-211ENST00000506690 SNRNP200O75643 2136 aaKnown RBP15.61■□□□□ 0.09
SQSTM1-211ENST00000506690 NPIPA5A0A0B4J1W7 369 aa15.6■□□□□ 0.09
SQSTM1-211ENST00000506690 OR14I1A6ND48 311 aa15.6■□□□□ 0.09
SQSTM1-211ENST00000506690 NPIPA7E9PJI5 369 aa15.6■□□□□ 0.09
SQSTM1-211ENST00000506690 TGM5O43548 720 aa15.6■□□□□ 0.09
SQSTM1-211ENST00000506690 CTAG2O75638 210 aa15.6■□□□□ 0.09
SQSTM1-211ENST00000506690 EIF3GO75821 320 aaKnown RBP eCLIP15.6■□□□□ 0.09
SQSTM1-211ENST00000506690 GLAP06280 429 aa15.6■□□□□ 0.09
SQSTM1-211ENST00000506690 NPIPA8P0DM63 369 aa15.6■□□□□ 0.09
SQSTM1-211ENST00000506690 ITGB8P26012 769 aa15.6■□□□□ 0.09
SQSTM1-211ENST00000506690 LY6G5CQ5SRR4 150 aa15.6■□□□□ 0.09
SQSTM1-211ENST00000506690 THAP6Q8TBB0 222 aa15.6■□□□□ 0.09
SQSTM1-211ENST00000506690 XKR8Q9H6D3 395 aa15.6■□□□□ 0.09
SQSTM1-211ENST00000506690 SFXN1Q9H9B4 322 aa15.6■□□□□ 0.09
SQSTM1-211ENST00000506690 MKL2Q9ULH7 1088 aa15.6■□□□□ 0.09
SQSTM1-211ENST00000506690 IER3IP1Q9Y5U9 82 aa15.6■□□□□ 0.09
SQSTM1-211ENST00000506690 OR2W5A6NFC9 320 aa15.6■□□□□ 0.09
SQSTM1-211ENST00000506690 CRYBA1P05813 215 aa15.6■□□□□ 0.09
SQSTM1-211ENST00000506690 ACAA1P09110 424 aaPredicted RBP15.6■□□□□ 0.09
SQSTM1-211ENST00000506690 NR0B1P51843 470 aaKnown RBP15.6■□□□□ 0.09
SQSTM1-211ENST00000506690 FAM209BQ5JX69 171 aa15.6■□□□□ 0.09
SQSTM1-211ENST00000506690 SLC35D3Q5M8T2 416 aa15.6■□□□□ 0.09
SQSTM1-211ENST00000506690 DCST2Q5T1A1 773 aa15.6■□□□□ 0.09
SQSTM1-211ENST00000506690 NKAIN2Q5VXU1 208 aa15.6■□□□□ 0.09
SQSTM1-211ENST00000506690 STEAP1BQ6NZ63 245 aa15.6■□□□□ 0.09
SQSTM1-211ENST00000506690 ZNF813Q6ZN06 617 aa15.6■□□□□ 0.09
SQSTM1-211ENST00000506690 ACOT7LQ6ZUV0 252 aa15.6■□□□□ 0.09
SQSTM1-211ENST00000506690 RAB42Q8N4Z0 105 aa15.6■□□□□ 0.09
SQSTM1-211ENST00000506690 ZNF559Q9BR84 538 aa15.6■□□□□ 0.09
SQSTM1-211ENST00000506690 TMEM27Q9HBJ8 222 aa15.6■□□□□ 0.09
SQSTM1-211ENST00000506690 MYOZ1Q9NP98 299 aaPredicted RBP15.6■□□□□ 0.09
SQSTM1-211ENST00000506690 ASF1BQ9NVP2 202 aa15.6■□□□□ 0.09
SQSTM1-211ENST00000506690 FLRT3Q9NZU0 649 aa15.6■□□□□ 0.09
SQSTM1-211ENST00000506690 UPB1Q9UBR1 384 aa15.6■□□□□ 0.09
SQSTM1-211ENST00000506690 STEAP1Q9UHE8 339 aa15.6■□□□□ 0.09
SQSTM1-211ENST00000506690 TRBV5-5A0A0J9YX44 114 aa15.59■□□□□ 0.09
SQSTM1-211ENST00000506690 MEX3AA1L020 520 aaKnown RBP15.59■□□□□ 0.09
SQSTM1-211ENST00000506690 FGF16O43320 207 aa15.59■□□□□ 0.09
SQSTM1-211ENST00000506690 AK4P27144 223 aaPredicted RBP15.59■□□□□ 0.09
SQSTM1-211ENST00000506690 HTRA4P83105 476 aaPredicted RBP15.59■□□□□ 0.09
SQSTM1-211ENST00000506690 SSBP1Q04837 148 aaKnown RBP15.59■□□□□ 0.09
SQSTM1-211ENST00000506690 TEAD2Q15562 447 aa15.59■□□□□ 0.09
SQSTM1-211ENST00000506690 SWI5Q1ZZU3 235 aa15.59■□□□□ 0.09
SQSTM1-211ENST00000506690 AVPI1Q5T686 147 aa15.59■□□□□ 0.09
SQSTM1-211ENST00000506690 LPCAT3Q6P1A2 487 aa15.59■□□□□ 0.09
SQSTM1-211ENST00000506690 C3orf33Q6P1S2 294 aa15.59■□□□□ 0.09
SQSTM1-211ENST00000506690 ZNF227Q86WZ6 799 aa15.59■□□□□ 0.09
SQSTM1-211ENST00000506690 NPEPL1Q8NDH3 523 aa15.59■□□□□ 0.09
SQSTM1-211ENST00000506690 DVL3Q92997 716 aaPredicted RBP15.59■□□□□ 0.09
SQSTM1-211ENST00000506690 WNT2BQ93097 391 aa15.59■□□□□ 0.09
SQSTM1-211ENST00000506690 ARRDC3Q96B67 414 aa15.59■□□□□ 0.09
SQSTM1-211ENST00000506690 MRPS30Q9NP92 439 aaKnown RBP15.59■□□□□ 0.09
SQSTM1-211ENST00000506690 ZFP57Q9NU63 452 aa15.59■□□□□ 0.09
SQSTM1-211ENST00000506690 SCN5AQ14524 2016 aa15.59■□□□□ 0.09
SQSTM1-211ENST00000506690 TMEM82A0PJX8 343 aa15.59■□□□□ 0.09
SQSTM1-211ENST00000506690 MEIS3P1A6NDR6 274 aa15.59■□□□□ 0.09
SQSTM1-211ENST00000506690 MCIDASD6RGH6 385 aa15.59■□□□□ 0.09
SQSTM1-211ENST00000506690 RAD1O60671 282 aa15.59■□□□□ 0.09
SQSTM1-211ENST00000506690 NDUFB2O95178 105 aa15.59■□□□□ 0.09
SQSTM1-211ENST00000506690 HEXAP06865 529 aa15.59■□□□□ 0.09
SQSTM1-211ENST00000506690 SLC35G4P0C7Q5 338 aa15.59■□□□□ 0.09
SQSTM1-211ENST00000506690 SPI1P17947 270 aa15.59■□□□□ 0.09
SQSTM1-211ENST00000506690 SOX2P48431 317 aa15.59■□□□□ 0.09
SQSTM1-211ENST00000506690 RAB28P51157 221 aa15.59■□□□□ 0.09
SQSTM1-211ENST00000506690 EFNB2P52799 333 aa15.59■□□□□ 0.09
SQSTM1-211ENST00000506690 MLF2Q15773 248 aaPredicted RBP15.59■□□□□ 0.09
SQSTM1-211ENST00000506690 SMAD2Q15796 467 aaKnown RBP15.59■□□□□ 0.09
SQSTM1-211ENST00000506690 VWA2Q5GFL6 755 aa15.59■□□□□ 0.09
SQSTM1-211ENST00000506690 BEX5Q5H9J7 111 aa15.59■□□□□ 0.09
SQSTM1-211ENST00000506690 EXOSC6Q5RKV6 272 aaKnown RBP15.59■□□□□ 0.09
SQSTM1-211ENST00000506690 LIPNQ5VXI9 398 aa15.59■□□□□ 0.09
SQSTM1-211ENST00000506690 SLC6A19Q695T7 634 aa15.59■□□□□ 0.09
SQSTM1-211ENST00000506690 ENPP7Q6UWV6 458 aa15.59■□□□□ 0.09
SQSTM1-211ENST00000506690 BIVMQ86UB2 503 aa15.59■□□□□ 0.09
SQSTM1-211ENST00000506690 C2CD4CQ8TF44 421 aa15.59■□□□□ 0.09
SQSTM1-211ENST00000506690 LGR4Q9BXB1 951 aa15.59■□□□□ 0.09
SQSTM1-211ENST00000506690 NMNAT2Q9BZQ4 307 aa15.59■□□□□ 0.09
SQSTM1-211ENST00000506690 TLNRD1Q9H1K6 362 aa15.59■□□□□ 0.09
SQSTM1-211ENST00000506690 TRPV4Q9HBA0 871 aa15.59■□□□□ 0.09
SQSTM1-211ENST00000506690 MYEF2Q9P2K5 600 aaKnown RBP15.59■□□□□ 0.09
SQSTM1-211ENST00000506690 MAFFQ9ULX9 164 aa15.59■□□□□ 0.09
SQSTM1-211ENST00000506690 TRAV8-7A0A075B6U6 113 aa15.58■□□□□ 0.09
SQSTM1-211ENST00000506690 IMPA2O14732 288 aa15.58■□□□□ 0.09
SQSTM1-211ENST00000506690 ACTL6AO96019 429 aa15.58■□□□□ 0.09
SQSTM1-211ENST00000506690 ANXA2P07355 339 aaKnown RBP15.58■□□□□ 0.09
SQSTM1-211ENST00000506690 RBM34P42696 430 aaKnown RBP15.58■□□□□ 0.09
SQSTM1-211ENST00000506690 BLOC1S1P78537 153 aa15.58■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms