RNA–Protein interactions for RNA: ENST00000505804.1

TOPBP1-204, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 472 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-204ENST00000505804 MS4A4EQ96PG1 132 aa2.47□□□□□ -2.01
TOPBP1-204ENST00000505804 CCT7Q99832 543 aa2.47□□□□□ -2.01
TOPBP1-204ENST00000505804 FAIM2Q9BWQ8 316 aa2.47□□□□□ -2.01
TOPBP1-204ENST00000505804 GON7Q9BXV9 100 aa2.47□□□□□ -2.01
TOPBP1-204ENST00000505804 KRTAP4-4Q9BYR3 166 aa2.47□□□□□ -2.01
TOPBP1-204ENST00000505804 SLC17A9Q9BYT1 436 aa2.47□□□□□ -2.01
TOPBP1-204ENST00000505804 DNTTIP1Q9H147 329 aa2.47□□□□□ -2.01
TOPBP1-204ENST00000505804 RANBP3Q9H6Z4 567 aaPredicted RBP2.47□□□□□ -2.01
TOPBP1-204ENST00000505804 ZNF226Q9NYT6 803 aa2.47□□□□□ -2.01
TOPBP1-204ENST00000505804 SPATA7Q9P0W8 599 aa2.47□□□□□ -2.01
TOPBP1-204ENST00000505804 XCL2Q9UBD3 114 aa2.47□□□□□ -2.01
TOPBP1-204ENST00000505804 PCYOX1Q9UHG3 505 aa2.47□□□□□ -2.01
TOPBP1-204ENST00000505804 IGKV2D-24A0A075B6R9 120 aa2.46□□□□□ -2.02
TOPBP1-204ENST00000505804 PCP4L1A6NKN8 68 aa2.46□□□□□ -2.02
TOPBP1-204ENST00000505804 SNTNA6NMZ2 147 aa2.46□□□□□ -2.02
TOPBP1-204ENST00000505804 GOLGA8SH3BPF8 625 aa2.46□□□□□ -2.02
TOPBP1-204ENST00000505804 CPLX1O14810 134 aa2.46□□□□□ -2.02
TOPBP1-204ENST00000505804 PLEKP08567 350 aaPredicted RBP2.46□□□□□ -2.02
TOPBP1-204ENST00000505804 UBTFL1P0CB47 393 aaPredicted RBP2.46□□□□□ -2.02
TOPBP1-204ENST00000505804 MAGP20916 626 aa2.46□□□□□ -2.02
TOPBP1-204ENST00000505804 CNR1P21554 472 aa2.46□□□□□ -2.02
TOPBP1-204ENST00000505804 CD1CP29017 333 aa2.46□□□□□ -2.02
TOPBP1-204ENST00000505804 LINC00315P59091 139 aa2.46□□□□□ -2.02
TOPBP1-204ENST00000505804 OGDHQ02218 1023 aa2.46□□□□□ -2.02
TOPBP1-204ENST00000505804 IL24Q13007 206 aa2.46□□□□□ -2.02
TOPBP1-204ENST00000505804 CHIT1Q13231 466 aa2.46□□□□□ -2.02
TOPBP1-204ENST00000505804 GUCA2BQ16661 112 aa2.46□□□□□ -2.02
TOPBP1-204ENST00000505804 DGUOKQ16854 277 aa2.46□□□□□ -2.02
TOPBP1-204ENST00000505804 OR2A2Q6IF42 318 aa2.46□□□□□ -2.02
TOPBP1-204ENST00000505804 OR52W1Q6IF63 320 aa2.46□□□□□ -2.02
TOPBP1-204ENST00000505804 IGFL3Q6UXB1 125 aa2.46□□□□□ -2.02
TOPBP1-204ENST00000505804 LRRC75A-AS1Q8N1F1 130 aa2.46□□□□□ -2.02
TOPBP1-204ENST00000505804 ZADH2Q8N4Q0 377 aa2.46□□□□□ -2.02
TOPBP1-204ENST00000505804 TPRX1Q8N7U7 411 aa2.46□□□□□ -2.02
TOPBP1-204ENST00000505804 VN1R2Q8NFZ6 395 aa2.46□□□□□ -2.02
TOPBP1-204ENST00000505804 OR1L4Q8NGR5 311 aa2.46□□□□□ -2.02
TOPBP1-204ENST00000505804 ZNF596Q8TC21 504 aa2.46□□□□□ -2.02
TOPBP1-204ENST00000505804 SMARCD2Q92925 531 aa2.46□□□□□ -2.02
TOPBP1-204ENST00000505804 DNAJC19Q96DA6 116 aa2.46□□□□□ -2.02
TOPBP1-204ENST00000505804 PANX2Q96RD6 677 aa2.46□□□□□ -2.02
TOPBP1-204ENST00000505804 FMO2Q99518 471 aa2.46□□□□□ -2.02
TOPBP1-204ENST00000505804 RIOK1Q9BRS2 568 aaKnown RBP2.46□□□□□ -2.02
TOPBP1-204ENST00000505804 CRACR2AQ9BSW2 395 aa2.46□□□□□ -2.02
TOPBP1-204ENST00000505804 TRIM62Q9BVG3 475 aa2.46□□□□□ -2.02
TOPBP1-204ENST00000505804 TPK1Q9H3S4 243 aa2.46□□□□□ -2.02
TOPBP1-204ENST00000505804 SLCO1B3Q9NPD5 702 aa2.46□□□□□ -2.02
TOPBP1-204ENST00000505804 PSG11Q9UQ72 335 aa2.46□□□□□ -2.02
TOPBP1-204ENST00000505804 FOXE1O00358 373 aaPredicted RBP2.45□□□□□ -2.02
TOPBP1-204ENST00000505804 PEX7O00628 323 aa2.45□□□□□ -2.02
TOPBP1-204ENST00000505804 FCMRO60667 390 aa2.45□□□□□ -2.02
TOPBP1-204ENST00000505804 SURF6O75683 361 aaKnown RBP2.45□□□□□ -2.02
TOPBP1-204ENST00000505804 OR7A10O76100 309 aa2.45□□□□□ -2.02
TOPBP1-204ENST00000505804 IGLV2-23P01705 113 aa2.45□□□□□ -2.02
TOPBP1-204ENST00000505804 CSF3P09919 207 aa2.45□□□□□ -2.02
TOPBP1-204ENST00000505804 GKN3PP0CG01 181 aa2.45□□□□□ -2.02
TOPBP1-204ENST00000505804 CXCL5P42830 114 aa2.45□□□□□ -2.02
TOPBP1-204ENST00000505804 CEBPDP49716 269 aaPredicted RBP2.45□□□□□ -2.02
TOPBP1-204ENST00000505804 FGF8P55075 233 aaPredicted RBP2.45□□□□□ -2.02
TOPBP1-204ENST00000505804 ACTR1AP61163 376 aa2.45□□□□□ -2.02
TOPBP1-204ENST00000505804 ACTA1P68133 377 aa2.45□□□□□ -2.02
TOPBP1-204ENST00000505804 SMARCB1Q12824 385 aa2.45□□□□□ -2.02
TOPBP1-204ENST00000505804 GNMTQ14749 295 aa2.45□□□□□ -2.02
TOPBP1-204ENST00000505804 SGCAQ16586 387 aa2.45□□□□□ -2.02
TOPBP1-204ENST00000505804 KCTD19Q17RG1 926 aaPredicted RBP2.45□□□□□ -2.02
TOPBP1-204ENST00000505804 TMEM255AQ5JRV8 349 aa2.45□□□□□ -2.02
TOPBP1-204ENST00000505804 RGS9BPQ6ZS82 235 aa2.45□□□□□ -2.02
TOPBP1-204ENST00000505804 EFL1Q7Z2Z2 1120 aaKnown RBP2.45□□□□□ -2.02
TOPBP1-204ENST00000505804 ZNF679Q8IYX0 411 aa2.45□□□□□ -2.02
TOPBP1-204ENST00000505804 SAXO1Q8IYX7 474 aa2.45□□□□□ -2.02
TOPBP1-204ENST00000505804 ZCCHC7Q8N3Z6 543 aaKnown RBP2.45□□□□□ -2.02
TOPBP1-204ENST00000505804 BHLHE23Q8NDY6 225 aa2.45□□□□□ -2.02
TOPBP1-204ENST00000505804 FAM83FQ8NEG4 500 aaPredicted RBP2.45□□□□□ -2.02
TOPBP1-204ENST00000505804 TRPV1Q8NER1 839 aa2.45□□□□□ -2.02
TOPBP1-204ENST00000505804 LRRC58Q96CX6 371 aa2.45□□□□□ -2.02
TOPBP1-204ENST00000505804 TCEANC2Q96MN5 208 aa2.45□□□□□ -2.02
TOPBP1-204ENST00000505804 CNN2Q99439 309 aaKnown RBP2.45□□□□□ -2.02
TOPBP1-204ENST00000505804 IFI27L2Q9H2X8 130 aa2.45□□□□□ -2.02
TOPBP1-204ENST00000505804 NIPAL2Q9H841 368 aa2.45□□□□□ -2.02
TOPBP1-204ENST00000505804 NMRAL1Q9HBL8 299 aa2.45□□□□□ -2.02
TOPBP1-204ENST00000505804 ADAP2Q9NPF8 381 aa2.45□□□□□ -2.02
TOPBP1-204ENST00000505804 CYTL1Q9NRR1 136 aa2.45□□□□□ -2.02
TOPBP1-204ENST00000505804 TBX21Q9UL17 535 aa2.45□□□□□ -2.02
TOPBP1-204ENST00000505804 MSH6P52701 1360 aa2.45□□□□□ -2.02
TOPBP1-204ENST00000505804 IGKV1D-13A0A0B4J2D9 117 aa2.44□□□□□ -2.02
TOPBP1-204ENST00000505804 CD5LO43866 347 aa2.44□□□□□ -2.02
TOPBP1-204ENST00000505804 ZNF324O75467 553 aaPredicted RBP2.44□□□□□ -2.02
TOPBP1-204ENST00000505804 TSPAN12O95859 305 aa2.44□□□□□ -2.02
TOPBP1-204ENST00000505804 IGKV1-13P0DP09 117 aa2.44□□□□□ -2.02
TOPBP1-204ENST00000505804 TCN1P20061 433 aaPredicted RBP2.44□□□□□ -2.02
TOPBP1-204ENST00000505804 LONP1P36776 959 aaKnown RBP2.44□□□□□ -2.02
TOPBP1-204ENST00000505804 FDFT1P37268 417 aa2.44□□□□□ -2.02
TOPBP1-204ENST00000505804 RPS9P46781 194 aaKnown RBP2.44□□□□□ -2.02
TOPBP1-204ENST00000505804 NPBWR2P48146 333 aa2.44□□□□□ -2.02
TOPBP1-204ENST00000505804 ZNF136P52737 540 aa2.44□□□□□ -2.02
TOPBP1-204ENST00000505804 SEC61GP60059 68 aa2.44□□□□□ -2.02
TOPBP1-204ENST00000505804 KRTAP10-8P60410 259 aa2.44□□□□□ -2.02
TOPBP1-204ENST00000505804 IRX3P78415 501 aaPredicted RBP2.44□□□□□ -2.02
TOPBP1-204ENST00000505804 MRPL28Q13084 256 aaKnown RBP2.44□□□□□ -2.02
TOPBP1-204ENST00000505804 AQP6Q13520 282 aa2.44□□□□□ -2.02
TOPBP1-204ENST00000505804 ZBED5Q49AG3 693 aa2.44□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms