RNA–Protein interactions for RNA: ENST00000504927.5

DDR1-255, Transcript of discoidin domain receptor tyrosine kinase 1, human

TSL 4

Gene DDR1, Length 542 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-255	ENST00000504927	SMIM11A	P58511	58 aa		18.18	■□□□□ 0.5
DDR1-255	ENST00000504927	PRKCD	Q05655	676 aa		18.18	■□□□□ 0.5
DDR1-255	ENST00000504927	DGCR6	Q14129	220 aa		18.18	■□□□□ 0.5
DDR1-255	ENST00000504927	HMBOX1	Q6NT76	420 aa		18.18	■□□□□ 0.5
DDR1-255	ENST00000504927	ZNF730	Q6ZMV8	503 aa		18.18	■□□□□ 0.5
DDR1-255	ENST00000504927	GPR137C	Q8N3F9	429 aa		18.18	■□□□□ 0.5
DDR1-255	ENST00000504927	FAM86B1	Q8N7N1	296 aa		18.18	■□□□□ 0.5
DDR1-255	ENST00000504927	PIP5K1A	Q99755	562 aa		18.18	■□□□□ 0.5
DDR1-255	ENST00000504927	PLEKHF2	Q9H8W4	249 aa		18.18	■□□□□ 0.5
DDR1-255	ENST00000504927	SLC35F4	A4IF30	521 aa		18.17	■□□□□ 0.5
DDR1-255	ENST00000504927	UPK3A	O75631	287 aa		18.17	■□□□□ 0.5
DDR1-255	ENST00000504927	SEMG1	P04279	462 aa		18.17	■□□□□ 0.5
DDR1-255	ENST00000504927	IFI30	P13284	250 aa		18.17	■□□□□ 0.5
DDR1-255	ENST00000504927	FOXG1	P55316	489 aa	Predicted RBP	18.17	■□□□□ 0.5
DDR1-255	ENST00000504927	SH3BGR	P55822	239 aa	Predicted RBP	18.17	■□□□□ 0.5
DDR1-255	ENST00000504927	VLDLR	P98155	873 aa		18.17	■□□□□ 0.5
DDR1-255	ENST00000504927	ANKDD1A	Q495B1	522 aa		18.17	■□□□□ 0.5
DDR1-255	ENST00000504927	MBOAT2	Q6ZWT7	520 aa		18.17	■□□□□ 0.5
DDR1-255	ENST00000504927	SLC35D2	Q76EJ3	337 aa		18.17	■□□□□ 0.5
DDR1-255	ENST00000504927	DHFR2	Q86XF0	187 aa		18.17	■□□□□ 0.5
DDR1-255	ENST00000504927	C20orf196	Q8IYI0	205 aa		18.17	■□□□□ 0.5
DDR1-255	ENST00000504927	TMEM123	Q8N131	208 aa		18.17	■□□□□ 0.5
DDR1-255	ENST00000504927	OR6X1	Q8NH79	312 aa		18.17	■□□□□ 0.5
DDR1-255	ENST00000504927	TXNDC15	Q96J42	360 aa		18.17	■□□□□ 0.5
DDR1-255	ENST00000504927	ESRP2	Q9H6T0	727 aa	Known RBP	18.17	■□□□□ 0.5
DDR1-255	ENST00000504927	IL1RAP	Q9NPH3	570 aa		18.17	■□□□□ 0.5
DDR1-255	ENST00000504927	B3GAT2	Q9NPZ5	323 aa		18.17	■□□□□ 0.5
DDR1-255	ENST00000504927	MED29	Q9NX70	200 aa		18.17	■□□□□ 0.5
DDR1-255	ENST00000504927		A0A087WUU8	490 aa		18.16	■□□□□ 0.5
DDR1-255	ENST00000504927	MBD3L2B	A0A1B0GVZ6	204 aa	Predicted RBP	18.16	■□□□□ 0.5
DDR1-255	ENST00000504927		A0A1W2PRG6	482 aa		18.16	■□□□□ 0.5
DDR1-255	ENST00000504927	hCG_2039718	K7EN88	272 aa		18.16	■□□□□ 0.5
DDR1-255	ENST00000504927	GYG2	O15488	501 aa		18.16	■□□□□ 0.5
DDR1-255	ENST00000504927	STAMBP	O95630	424 aa		18.16	■□□□□ 0.5
DDR1-255	ENST00000504927	TSPAN19	P0C672	248 aa		18.16	■□□□□ 0.5
DDR1-255	ENST00000504927	IFNGR1	P15260	489 aa		18.16	■□□□□ 0.5
DDR1-255	ENST00000504927	HOXC12	P31275	282 aa		18.16	■□□□□ 0.5
DDR1-255	ENST00000504927	RPL18	Q07020	188 aa	Known RBP	18.16	■□□□□ 0.5
DDR1-255	ENST00000504927	DNAL1	Q4LDG9	190 aa		18.16	■□□□□ 0.5
DDR1-255	ENST00000504927	C9orf135	Q5VTT2	229 aa		18.16	■□□□□ 0.5
DDR1-255	ENST00000504927	ALKBH2	Q6NS38	261 aa		18.16	■□□□□ 0.5
DDR1-255	ENST00000504927	CDH24	Q86UP0	819 aa		18.16	■□□□□ 0.5
DDR1-255	ENST00000504927	NRM	Q8IXM6	262 aa		18.16	■□□□□ 0.5
DDR1-255	ENST00000504927	PLPPR2	Q96GM1	343 aa		18.16	■□□□□ 0.5
DDR1-255	ENST00000504927	ZNF347	Q96SE7	839 aa		18.16	■□□□□ 0.5
DDR1-255	ENST00000504927	EMC6	Q9BV81	110 aa		18.16	■□□□□ 0.5
DDR1-255	ENST00000504927	AMDHD2	Q9Y303	409 aa		18.16	■□□□□ 0.5
DDR1-255	ENST00000504927	AKAP6	Q13023	2319 aa		18.16	■□□□□ 0.5
DDR1-255	ENST00000504927	SERPINI2	O75830	405 aa		18.15	■□□□□ 0.5
DDR1-255	ENST00000504927	BCL10	O95999	233 aa		18.15	■□□□□ 0.5
DDR1-255	ENST00000504927	FABP3	P05413	133 aa		18.15	■□□□□ 0.5
DDR1-255	ENST00000504927	HOXB1	P14653	301 aa	Predicted RBP	18.15	■□□□□ 0.5
DDR1-255	ENST00000504927	FUT4	P22083	530 aa		18.15	■□□□□ 0.5
DDR1-255	ENST00000504927	LOX	P28300	417 aa	Predicted RBP	18.15	■□□□□ 0.5
DDR1-255	ENST00000504927	SLC9A3	P48764	834 aa		18.15	■□□□□ 0.5
DDR1-255	ENST00000504927	ROR2	Q01974	943 aa	Known RBP	18.15	■□□□□ 0.5
DDR1-255	ENST00000504927	LGALS3BP	Q08380	585 aa		18.15	■□□□□ 0.5
DDR1-255	ENST00000504927	IQCC	Q4KMZ1	466 aa		18.15	■□□□□ 0.5
DDR1-255	ENST00000504927	LCN8	Q6JVE9	175 aa		18.15	■□□□□ 0.5
DDR1-255	ENST00000504927	CYP2R1	Q6VVX0	501 aa		18.15	■□□□□ 0.5
DDR1-255	ENST00000504927	SLC7A13	Q8TCU3	470 aa		18.15	■□□□□ 0.5
DDR1-255	ENST00000504927	NINJ1	Q92982	152 aa		18.15	■□□□□ 0.5
DDR1-255	ENST00000504927	ASB9	Q96DX5	294 aa		18.15	■□□□□ 0.5
DDR1-255	ENST00000504927	DHRS1	Q96LJ7	313 aa		18.15	■□□□□ 0.5
DDR1-255	ENST00000504927	ALKBH3	Q96Q83	286 aa	Predicted RBP	18.15	■□□□□ 0.5
DDR1-255	ENST00000504927	BTBD10	Q9BSF8	475 aa		18.15	■□□□□ 0.5
DDR1-255	ENST00000504927	THTPA	Q9BU02	230 aa		18.15	■□□□□ 0.5
DDR1-255	ENST00000504927	GPR35	Q9HC97	309 aa		18.15	■□□□□ 0.5
DDR1-255	ENST00000504927	OBP2B	Q9NPH6	170 aa		18.15	■□□□□ 0.5
DDR1-255	ENST00000504927	SLC17A5	Q9NRA2	495 aa		18.15	■□□□□ 0.5
DDR1-255	ENST00000504927	TMEM5	Q9Y2B1	443 aa		18.15	■□□□□ 0.5
DDR1-255	ENST00000504927	MAGED1	Q9Y5V3	778 aa	Predicted RBP	18.15	■□□□□ 0.5
DDR1-255	ENST00000504927	SLC25A15	Q9Y619	301 aa		18.15	■□□□□ 0.5
DDR1-255	ENST00000504927		V9GYQ6	96 aa		18.15	■□□□□ 0.5
DDR1-255	ENST00000504927	CELSR1	Q9NYQ6	3014 aa		18.15	■□□□□ 0.5
DDR1-255	ENST00000504927	EFCAB9	A8MZ26	197 aa		18.14	■□□□□ 0.49
DDR1-255	ENST00000504927	PIP5K1C	O60331	668 aa		18.14	■□□□□ 0.49
DDR1-255	ENST00000504927	PDE5A	O76074	875 aa		18.14	■□□□□ 0.49
DDR1-255	ENST00000504927	WNT11	O96014	354 aa		18.14	■□□□□ 0.49
DDR1-255	ENST00000504927	SAG	P10523	405 aa	Predicted RBP	18.14	■□□□□ 0.49
DDR1-255	ENST00000504927	CDH2	P19022	906 aa	Predicted RBP	18.14	■□□□□ 0.49
DDR1-255	ENST00000504927	AQP2	P41181	271 aa		18.14	■□□□□ 0.49
DDR1-255	ENST00000504927	BID	P55957	195 aa		18.14	■□□□□ 0.49
DDR1-255	ENST00000504927	PRPS1	P60891	318 aa		18.14	■□□□□ 0.49
DDR1-255	ENST00000504927	TRAP1	Q12931	704 aa	Known RBP	18.14	■□□□□ 0.49
DDR1-255	ENST00000504927	CAMK2D	Q13557	499 aa		18.14	■□□□□ 0.49
DDR1-255	ENST00000504927	NCMAP	Q5T1S8	102 aa		18.14	■□□□□ 0.49
DDR1-255	ENST00000504927	ANKRD16	Q6P6B7	361 aa		18.14	■□□□□ 0.49
DDR1-255	ENST00000504927	PODNL1	Q6PEZ8	512 aa		18.14	■□□□□ 0.49
DDR1-255	ENST00000504927	TBPL2	Q6SJ96	375 aa		18.14	■□□□□ 0.49
DDR1-255	ENST00000504927	KLHL17	Q6TDP4	642 aa		18.14	■□□□□ 0.49
DDR1-255	ENST00000504927	TMPRSS11F	Q6ZWK6	438 aa		18.14	■□□□□ 0.49
DDR1-255	ENST00000504927	LINGO2	Q7L985	606 aa		18.14	■□□□□ 0.49
DDR1-255	ENST00000504927	PIWIL3	Q7Z3Z3	882 aa	Known RBP	18.14	■□□□□ 0.49
DDR1-255	ENST00000504927	HDDC2	Q7Z4H3	204 aa		18.14	■□□□□ 0.49
DDR1-255	ENST00000504927	OR1K1	Q8NGR3	316 aa		18.14	■□□□□ 0.49
DDR1-255	ENST00000504927	OR6N1	Q8NGY5	312 aa		18.14	■□□□□ 0.49
DDR1-255	ENST00000504927	OR52N5	Q8NH56	324 aa		18.14	■□□□□ 0.49
DDR1-255	ENST00000504927	MAGEE2	Q8TD90	523 aa	Predicted RBP	18.14	■□□□□ 0.49
DDR1-255	ENST00000504927	SLC25A44	Q96H78	314 aa	Predicted RBP	18.14	■□□□□ 0.49

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