RNA–Protein interactions for RNA: ENST00000504807.5

DDX41-204, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 794 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-204ENST00000504807 M0QX08 132 aa11.38□□□□□ -0.59
DDX41-204ENST00000504807 M0R3G1 203 aa11.38□□□□□ -0.59
DDX41-204ENST00000504807 AIM2O14862 343 aa11.38□□□□□ -0.59
DDX41-204ENST00000504807 IGKV3-15P01624 115 aa11.38□□□□□ -0.59
DDX41-204ENST00000504807 ZNF43P17038 809 aa11.38□□□□□ -0.59
DDX41-204ENST00000504807 TNFRSF1BP20333 461 aa11.38□□□□□ -0.59
DDX41-204ENST00000504807 PPIBP23284 216 aaKnown RBP11.38□□□□□ -0.59
DDX41-204ENST00000504807 SLC6A2P23975 617 aa11.38□□□□□ -0.59
DDX41-204ENST00000504807 POU3F1Q03052 451 aaPredicted RBP11.38□□□□□ -0.59
DDX41-204ENST00000504807 TMEM249Q2WGJ8 235 aa11.38□□□□□ -0.59
DDX41-204ENST00000504807 RABL3Q5HYI8 236 aa11.38□□□□□ -0.59
DDX41-204ENST00000504807 FAM91A1Q658Y4 838 aa11.38□□□□□ -0.59
DDX41-204ENST00000504807 VHLLQ6RSH7 139 aa11.38□□□□□ -0.59
DDX41-204ENST00000504807 MDP1Q86V88 176 aa11.38□□□□□ -0.59
DDX41-204ENST00000504807 MEX3DQ86XN8 651 aaKnown RBP11.38□□□□□ -0.59
DDX41-204ENST00000504807 ZCCHC24Q8N2G6 241 aaKnown RBP11.38□□□□□ -0.59
DDX41-204ENST00000504807 LRRC17Q8N6Y2 441 aa11.38□□□□□ -0.59
DDX41-204ENST00000504807 VANGL1Q8TAA9 524 aaPredicted RBP11.38□□□□□ -0.59
DDX41-204ENST00000504807 FGFBP3Q8TAT2 258 aa11.38□□□□□ -0.59
DDX41-204ENST00000504807 MAGEE2Q8TD90 523 aaPredicted RBP11.38□□□□□ -0.59
DDX41-204ENST00000504807 DNAJA4Q8WW22 397 aaPredicted RBP11.38□□□□□ -0.59
DDX41-204ENST00000504807 DYDC1Q8WWB3 177 aa11.38□□□□□ -0.59
DDX41-204ENST00000504807 STON2Q8WXE9 905 aa11.38□□□□□ -0.59
DDX41-204ENST00000504807 MS4A3Q96HJ5 214 aa11.38□□□□□ -0.59
DDX41-204ENST00000504807 SOX7Q9BT81 388 aa11.38□□□□□ -0.59
DDX41-204ENST00000504807 ARMC7Q9H6L4 198 aa11.38□□□□□ -0.59
DDX41-204ENST00000504807 FKRPQ9H9S5 495 aa11.38□□□□□ -0.59
DDX41-204ENST00000504807 CA10Q9NS85 328 aa11.38□□□□□ -0.59
DDX41-204ENST00000504807 TMEM160Q9NX00 188 aa11.38□□□□□ -0.59
DDX41-204ENST00000504807 GMPR2Q9P2T1 348 aaKnown RBP11.38□□□□□ -0.59
DDX41-204ENST00000504807 LEF1Q9UJU2 399 aaPredicted RBP11.38□□□□□ -0.59
DDX41-204ENST00000504807 ARFGEF3Q5TH69 2177 aa11.37□□□□□ -0.59
DDX41-204ENST00000504807 TMEM129A0AVI4 362 aa11.37□□□□□ -0.59
DDX41-204ENST00000504807 CPSF4LA6NMK7 179 aaKnown RBP11.37□□□□□ -0.59
DDX41-204ENST00000504807 HMGB1P1B2RPK0 211 aaPredicted RBP11.37□□□□□ -0.59
DDX41-204ENST00000504807 PLPP3O14495 311 aa11.37□□□□□ -0.59
DDX41-204ENST00000504807 SLC43A1O75387 559 aa11.37□□□□□ -0.59
DDX41-204ENST00000504807 WNT11O96014 354 aa11.37□□□□□ -0.59
DDX41-204ENST00000504807 HLA-HP01893 362 aa11.37□□□□□ -0.59
DDX41-204ENST00000504807 IDH3GP51553 393 aaPredicted RBP11.37□□□□□ -0.59
DDX41-204ENST00000504807 C1DQ13901 141 aaKnown RBP11.37□□□□□ -0.59
DDX41-204ENST00000504807 RAB35Q15286 201 aa11.37□□□□□ -0.59
DDX41-204ENST00000504807 ENTPD8Q5MY95 495 aa11.37□□□□□ -0.59
DDX41-204ENST00000504807 HIST2H2BDQ6DRA6 164 aa11.37□□□□□ -0.59
DDX41-204ENST00000504807 KLHL24Q6TFL4 600 aa11.37□□□□□ -0.59
DDX41-204ENST00000504807 KRT73Q86Y46 540 aa11.37□□□□□ -0.59
DDX41-204ENST00000504807 C20orf196Q8IYI0 205 aa11.37□□□□□ -0.59
DDX41-204ENST00000504807 ADPRHL1Q8NDY3 354 aa11.37□□□□□ -0.59
DDX41-204ENST00000504807 RNF217Q8TC41 542 aa11.37□□□□□ -0.59
DDX41-204ENST00000504807 SLC47A1Q96FL8 570 aa11.37□□□□□ -0.59
DDX41-204ENST00000504807 ADAD1Q96M93 576 aaKnown RBP11.37□□□□□ -0.59
DDX41-204ENST00000504807 MCHR1Q99705 422 aa11.37□□□□□ -0.59
DDX41-204ENST00000504807 PRSS27Q9BQR3 290 aa11.37□□□□□ -0.59
DDX41-204ENST00000504807 RHNO1Q9BSD3 238 aa11.37□□□□□ -0.59
DDX41-204ENST00000504807 KATNB1Q9BVA0 655 aa11.37□□□□□ -0.59
DDX41-204ENST00000504807 CACYBPQ9HB71 228 aaKnown RBP11.37□□□□□ -0.59
DDX41-204ENST00000504807 OBP2BQ9NPH6 170 aa11.37□□□□□ -0.59
DDX41-204ENST00000504807 ZNF446Q9NWS9 450 aa11.37□□□□□ -0.59
DDX41-204ENST00000504807 B3GNT2Q9NY97 397 aa11.37□□□□□ -0.59
DDX41-204ENST00000504807 NDUFAF1Q9Y375 327 aa11.37□□□□□ -0.59
DDX41-204ENST00000504807 YLPM1P49750 1951 aaKnown RBP11.37□□□□□ -0.59
DDX41-204ENST00000504807 IGHV2OR16-5A0A0B4J2B6 119 aa11.36□□□□□ -0.59
DDX41-204ENST00000504807 A0A0G2JND7 137 aa11.36□□□□□ -0.59
DDX41-204ENST00000504807 SLC35F4A4IF30 521 aa11.36□□□□□ -0.59
DDX41-204ENST00000504807 EVPLLA8MZ36 301 aa11.36□□□□□ -0.59
DDX41-204ENST00000504807 OR2T1O43869 369 aa11.36□□□□□ -0.59
DDX41-204ENST00000504807 OR4A8P0C604 315 aa11.36□□□□□ -0.59
DDX41-204ENST00000504807 IGHV4-31P0DP07 118 aa11.36□□□□□ -0.59
DDX41-204ENST00000504807 CBR1P16152 277 aa11.36□□□□□ -0.59
DDX41-204ENST00000504807 ZNF16P17020 682 aaPredicted RBP11.36□□□□□ -0.59
DDX41-204ENST00000504807 GTF2E2P29084 291 aaKnown RBP11.36□□□□□ -0.59
DDX41-204ENST00000504807 THBS4P35443 961 aa11.36□□□□□ -0.59
DDX41-204ENST00000504807 EFNA4P52798 201 aa11.36□□□□□ -0.59
DDX41-204ENST00000504807 UBE2NP61088 152 aaKnown RBP11.36□□□□□ -0.59
DDX41-204ENST00000504807 DEFA6Q01524 100 aa11.36□□□□□ -0.59
DDX41-204ENST00000504807 IL1RL1Q01638 556 aa11.36□□□□□ -0.59
DDX41-204ENST00000504807 LOXL1Q08397 574 aaPredicted RBP11.36□□□□□ -0.59
DDX41-204ENST00000504807 CAMK2DQ13557 499 aa11.36□□□□□ -0.59
DDX41-204ENST00000504807 NFYCQ13952 458 aa11.36□□□□□ -0.59
DDX41-204ENST00000504807 CLEC2AQ6UVW9 174 aa11.36□□□□□ -0.59
DDX41-204ENST00000504807 ABHD12BQ7Z5M8 362 aaPredicted RBP11.36□□□□□ -0.59
DDX41-204ENST00000504807 DEPDC4Q8N2C3 294 aa11.36□□□□□ -0.59
DDX41-204ENST00000504807 C11orf65Q8NCR3 313 aa11.36□□□□□ -0.59
DDX41-204ENST00000504807 OR6S1Q8NH40 331 aa11.36□□□□□ -0.59
DDX41-204ENST00000504807 OR10A6Q8NH74 314 aa11.36□□□□□ -0.59
DDX41-204ENST00000504807 SGMS2Q8NHU3 365 aa11.36□□□□□ -0.59
DDX41-204ENST00000504807 FAM168AQ92567 244 aa11.36□□□□□ -0.59
DDX41-204ENST00000504807 TNFRSF13CQ96RJ3 184 aa11.36□□□□□ -0.59
DDX41-204ENST00000504807 TMEM43Q9BTV4 400 aa11.36□□□□□ -0.59
DDX41-204ENST00000504807 SPATA5L1Q9BVQ7 753 aa11.36□□□□□ -0.59
DDX41-204ENST00000504807 TMEM120AQ9BXJ8 343 aa11.36□□□□□ -0.59
DDX41-204ENST00000504807 TAS2R5Q9NYW4 299 aa11.36□□□□□ -0.59
DDX41-204ENST00000504807 ANGPT4Q9Y264 503 aa11.36□□□□□ -0.59
DDX41-204ENST00000504807 IGHV4-61A0A0C4DH41 118 aa11.35□□□□□ -0.59
DDX41-204ENST00000504807 PRORSD1PA6NEY8 169 aa11.35□□□□□ -0.59
DDX41-204ENST00000504807 ZNF99A8MXY4 864 aaPredicted RBP11.35□□□□□ -0.59
DDX41-204ENST00000504807 C11orf98E9PRG8 122 aa11.35□□□□□ -0.59
DDX41-204ENST00000504807 KPNA4O00629 521 aaPredicted RBP11.35□□□□□ -0.59
DDX41-204ENST00000504807 SHOX2O60902 331 aaPredicted RBP11.35□□□□□ -0.59
DDX41-204ENST00000504807 SERPINI2O75830 405 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms