RNA–Protein interactions for RNA: ENST00000502818.5

CPNE4-202, Transcript of copine 4, humanhuman

TSL 5 BASIC

Gene CPNE4, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-202ENST00000502818 CDH11P55287 796 aa6.59□□□□□ -1.35
CPNE4-202ENST00000502818 VBP1P61758 197 aa6.59□□□□□ -1.35
CPNE4-202ENST00000502818 GALK2Q01415 458 aa6.59□□□□□ -1.35
CPNE4-202ENST00000502818 ZNF45Q02386 682 aa6.59□□□□□ -1.35
CPNE4-202ENST00000502818 GLYR1Q49A26 553 aaPredicted RBP6.59□□□□□ -1.35
CPNE4-202ENST00000502818 KLHL12Q53G59 568 aa6.59□□□□□ -1.35
CPNE4-202ENST00000502818 CEP78Q5JTW2 689 aa6.59□□□□□ -1.35
CPNE4-202ENST00000502818 DCAF10Q5QP82 559 aa6.59□□□□□ -1.35
CPNE4-202ENST00000502818 ATAD3CQ5T2N8 411 aa6.59□□□□□ -1.35
CPNE4-202ENST00000502818 LCE1DQ5T752 114 aa6.59□□□□□ -1.35
CPNE4-202ENST00000502818 C1orf140Q5VVS0 124 aa6.59□□□□□ -1.35
CPNE4-202ENST00000502818 NIPAL3Q6P499 406 aa6.59□□□□□ -1.35
CPNE4-202ENST00000502818 CCBE1Q6UXH8 406 aaPredicted RBP6.59□□□□□ -1.35
CPNE4-202ENST00000502818 RTL4Q6ZR62 310 aa6.59□□□□□ -1.35
CPNE4-202ENST00000502818 FAM122BQ7Z309 247 aa6.59□□□□□ -1.35
CPNE4-202ENST00000502818 GRINAQ7Z429 371 aa6.59□□□□□ -1.35
CPNE4-202ENST00000502818 LHFPL3Q86UP9 236 aa6.59□□□□□ -1.35
CPNE4-202ENST00000502818 TMPRSS12Q86WS5 348 aa6.59□□□□□ -1.35
CPNE4-202ENST00000502818 ARMC10Q8N2F6 343 aa6.59□□□□□ -1.35
CPNE4-202ENST00000502818 TMEM99Q8N816 258 aa6.59□□□□□ -1.35
CPNE4-202ENST00000502818 FADS6Q8N9I5 356 aa6.59□□□□□ -1.35
CPNE4-202ENST00000502818 NPEPL1Q8NDH3 523 aa6.59□□□□□ -1.35
CPNE4-202ENST00000502818 MCFD2Q8NI22 146 aa6.59□□□□□ -1.35
CPNE4-202ENST00000502818 PAQR8Q8TEZ7 354 aa6.59□□□□□ -1.35
CPNE4-202ENST00000502818 MYDGFQ969H8 173 aa6.59□□□□□ -1.35
CPNE4-202ENST00000502818 SIGLEC12Q96PQ1 595 aa6.59□□□□□ -1.35
CPNE4-202ENST00000502818 SLC38A2Q96QD8 506 aa6.59□□□□□ -1.35
CPNE4-202ENST00000502818 TSPAN32Q96QS1 320 aa6.59□□□□□ -1.35
CPNE4-202ENST00000502818 TBX5Q99593 518 aa6.59□□□□□ -1.35
CPNE4-202ENST00000502818 TIMP4Q99727 224 aa6.59□□□□□ -1.35
CPNE4-202ENST00000502818 GPR87Q9BY21 358 aa6.59□□□□□ -1.35
CPNE4-202ENST00000502818 NRIP3Q9NQ35 241 aa6.59□□□□□ -1.35
CPNE4-202ENST00000502818 CMC2Q9NRP2 79 aa6.59□□□□□ -1.35
CPNE4-202ENST00000502818 HPF1Q9NWY4 346 aa6.59□□□□□ -1.35
CPNE4-202ENST00000502818 LSM2Q9Y333 95 aaKnown RBP6.59□□□□□ -1.35
CPNE4-202ENST00000502818 FRYQ5TBA9 3013 aa6.59□□□□□ -1.35
CPNE4-202ENST00000502818 TRAV36DV7A0A075B6V5 113 aa6.58□□□□□ -1.36
CPNE4-202ENST00000502818 A0A1W2PNR3 127 aa6.58□□□□□ -1.36
CPNE4-202ENST00000502818 DCDC2BA2VCK2 349 aa6.58□□□□□ -1.36
CPNE4-202ENST00000502818 EFCAB10A6NFE3 127 aa6.58□□□□□ -1.36
CPNE4-202ENST00000502818 FAM25AB3EWG3 89 aa6.58□□□□□ -1.36
CPNE4-202ENST00000502818 FAM25CB3EWG5 89 aa6.58□□□□□ -1.36
CPNE4-202ENST00000502818 FAM25GB3EWG6 89 aa6.58□□□□□ -1.36
CPNE4-202ENST00000502818 FTCDNL1E5RQL4 147 aa6.58□□□□□ -1.36
CPNE4-202ENST00000502818 H0YC42 278 aa6.58□□□□□ -1.36
CPNE4-202ENST00000502818 DCTN6O00399 190 aa6.58□□□□□ -1.36
CPNE4-202ENST00000502818 MAGEB4O15481 346 aaPredicted RBP6.58□□□□□ -1.36
CPNE4-202ENST00000502818 PRODHO43272 600 aa6.58□□□□□ -1.36
CPNE4-202ENST00000502818 TBX1O43435 398 aa6.58□□□□□ -1.36
CPNE4-202ENST00000502818 ZIC3O60481 467 aa6.58□□□□□ -1.36
CPNE4-202ENST00000502818 MRPS14O60783 128 aaKnown RBP6.58□□□□□ -1.36
CPNE4-202ENST00000502818 RAMP1O60894 148 aa6.58□□□□□ -1.36
CPNE4-202ENST00000502818 LALBAP00709 142 aa6.58□□□□□ -1.36
CPNE4-202ENST00000502818 HSMCR30P0CW71 290 aa6.58□□□□□ -1.36
CPNE4-202ENST00000502818 CSRP1P21291 193 aaKnown RBP6.58□□□□□ -1.36
CPNE4-202ENST00000502818 SLC2A5P22732 501 aa6.58□□□□□ -1.36
CPNE4-202ENST00000502818 GRPRP30550 384 aa6.58□□□□□ -1.36
CPNE4-202ENST00000502818 SLC6A6P31641 620 aa6.58□□□□□ -1.36
CPNE4-202ENST00000502818 HTR3AP46098 478 aa6.58□□□□□ -1.36
CPNE4-202ENST00000502818 CTXN1P60606 82 aa6.58□□□□□ -1.36
CPNE4-202ENST00000502818 CSNK2BP67870 215 aa6.58□□□□□ -1.36
CPNE4-202ENST00000502818 RUNX1T1Q06455 604 aa6.58□□□□□ -1.36
CPNE4-202ENST00000502818 SNTA1Q13424 505 aa6.58□□□□□ -1.36
CPNE4-202ENST00000502818 ZNF404Q494X3 552 aa6.58□□□□□ -1.36
CPNE4-202ENST00000502818 ZFP69Q49AA0 526 aa6.58□□□□□ -1.36
CPNE4-202ENST00000502818 OPN5Q6U736 354 aa6.58□□□□□ -1.36
CPNE4-202ENST00000502818 LINC00696Q6ZRV3 163 aa6.58□□□□□ -1.36
CPNE4-202ENST00000502818 GDPD3Q7L5L3 318 aa6.58□□□□□ -1.36
CPNE4-202ENST00000502818 UBQLNLQ8IYU4 475 aa6.58□□□□□ -1.36
CPNE4-202ENST00000502818 OR51G2Q8NGK0 314 aa6.58□□□□□ -1.36
CPNE4-202ENST00000502818 ZNF417Q8TAU3 575 aa6.58□□□□□ -1.36
CPNE4-202ENST00000502818 LIPHQ8WWY8 451 aa6.58□□□□□ -1.36
CPNE4-202ENST00000502818 C1GALT1C1Q96EU7 318 aa6.58□□□□□ -1.36
CPNE4-202ENST00000502818 TMEM80Q96HE8 168 aa6.58□□□□□ -1.36
CPNE4-202ENST00000502818 FRMD6Q96NE9 622 aa6.58□□□□□ -1.36
CPNE4-202ENST00000502818 FOXN4Q96NZ1 517 aa6.58□□□□□ -1.36
CPNE4-202ENST00000502818 ZNF587Q96SQ5 575 aaPredicted RBP6.58□□□□□ -1.36
CPNE4-202ENST00000502818 CDCA4Q9BXL8 241 aa6.58□□□□□ -1.36
CPNE4-202ENST00000502818 ANGPTL4Q9BY76 406 aa6.58□□□□□ -1.36
CPNE4-202ENST00000502818 TTTY10Q9BZA0 68 aa6.58□□□□□ -1.36
CPNE4-202ENST00000502818 SLC19A3Q9BZV2 496 aa6.58□□□□□ -1.36
CPNE4-202ENST00000502818 STMN3Q9NZ72 180 aa6.58□□□□□ -1.36
CPNE4-202ENST00000502818 CNOT2Q9NZN8 540 aaKnown RBP6.58□□□□□ -1.36
CPNE4-202ENST00000502818 HIF3AQ9Y2N7 669 aa6.58□□□□□ -1.36
CPNE4-202ENST00000502818 CAB39Q9Y376 341 aaPredicted RBP6.58□□□□□ -1.36
CPNE4-202ENST00000502818 RPL36Q9Y3U8 105 aaKnown RBP6.58□□□□□ -1.36
CPNE4-202ENST00000502818 PNMA8CA0A1B0GUJ8 204 aa6.58□□□□□ -1.36
CPNE4-202ENST00000502818 METTL15A6NJ78 407 aa6.58□□□□□ -1.36
CPNE4-202ENST00000502818 A8MVM7 634 aa6.58□□□□□ -1.36
CPNE4-202ENST00000502818 PROB1E7EW31 1015 aa6.58□□□□□ -1.36
CPNE4-202ENST00000502818 ETV2O00321 342 aaPredicted RBP6.58□□□□□ -1.36
CPNE4-202ENST00000502818 CCRL2O00421 344 aa6.58□□□□□ -1.36
CPNE4-202ENST00000502818 APOA1P02647 267 aa6.58□□□□□ -1.36
CPNE4-202ENST00000502818 HMGN1P05114 100 aa6.58□□□□□ -1.36
CPNE4-202ENST00000502818 TSPAN19P0C672 248 aa6.58□□□□□ -1.36
CPNE4-202ENST00000502818 LIMS3P0CW19 117 aa6.58□□□□□ -1.36
CPNE4-202ENST00000502818 LIMS4P0CW20 117 aa6.58□□□□□ -1.36
CPNE4-202ENST00000502818 PSKH1P11801 424 aa6.58□□□□□ -1.36
CPNE4-202ENST00000502818 PIPP12273 146 aaPredicted RBP6.58□□□□□ -1.36
CPNE4-202ENST00000502818 CEACAM1P13688 526 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms