RNA–Protein interactions for RNA: ENST00000498801.5

GARNL3-222, Transcript of GTPase activating Rap/RanGAP domain like 3, human

TSL 4

Gene GARNL3, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GARNL3-222	ENST00000498801	VLDLR	P98155	873 aa		6.62	□□□□□ -1.35
GARNL3-222	ENST00000498801	SLC10A1	Q14973	349 aa		6.62	□□□□□ -1.35
GARNL3-222	ENST00000498801	OR1Q1	Q15612	314 aa		6.62	□□□□□ -1.35
GARNL3-222	ENST00000498801	IGFBP7	Q16270	282 aa		6.62	□□□□□ -1.35
GARNL3-222	ENST00000498801	FAM98B	Q52LJ0	330 aa	Known RBP	6.62	□□□□□ -1.35
GARNL3-222	ENST00000498801	SLC25A53	Q5H9E4	307 aa		6.62	□□□□□ -1.35
GARNL3-222	ENST00000498801	ENTPD8	Q5MY95	495 aa		6.62	□□□□□ -1.35
GARNL3-222	ENST00000498801	WBP2NL	Q6ICG8	309 aa		6.62	□□□□□ -1.35
GARNL3-222	ENST00000498801	PLEKHM3	Q6ZWE6	761 aa		6.62	□□□□□ -1.35
GARNL3-222	ENST00000498801	RHOU	Q7L0Q8	258 aa		6.62	□□□□□ -1.35
GARNL3-222	ENST00000498801	ZNF771	Q7L3S4	317 aa	Predicted RBP	6.62	□□□□□ -1.35
GARNL3-222	ENST00000498801	GRINA	Q7Z429	371 aa		6.62	□□□□□ -1.35
GARNL3-222	ENST00000498801	CADM2	Q8N3J6	435 aa		6.62	□□□□□ -1.35
GARNL3-222	ENST00000498801	GTPBP8	Q8N3Z3	284 aa	Predicted RBP	6.62	□□□□□ -1.35
GARNL3-222	ENST00000498801	LSMEM1	Q8N8F7	131 aa		6.62	□□□□□ -1.35
GARNL3-222	ENST00000498801	OR5M1	Q8NGP8	315 aa		6.62	□□□□□ -1.35
GARNL3-222	ENST00000498801	NEIL3	Q8TAT5	605 aa		6.62	□□□□□ -1.35
GARNL3-222	ENST00000498801	PHF10	Q8WUB8	498 aa	Known RBP	6.62	□□□□□ -1.35
GARNL3-222	ENST00000498801	ASB10	Q8WXI3	467 aa		6.62	□□□□□ -1.35
GARNL3-222	ENST00000498801	TRIM63	Q969Q1	353 aa		6.62	□□□□□ -1.35
GARNL3-222	ENST00000498801	RSRC1	Q96IZ7	334 aa	Known RBP	6.62	□□□□□ -1.35
GARNL3-222	ENST00000498801	SFXN2	Q96NB2	322 aa		6.62	□□□□□ -1.35
GARNL3-222	ENST00000498801	HIST1H2AA	Q96QV6	131 aa		6.62	□□□□□ -1.35
GARNL3-222	ENST00000498801	SEPHS2	Q99611	448 aa		6.62	□□□□□ -1.35
GARNL3-222	ENST00000498801	NPAS1	Q99742	590 aa		6.62	□□□□□ -1.35
GARNL3-222	ENST00000498801	PIGQ	Q9BRB3	760 aa		6.62	□□□□□ -1.35
GARNL3-222	ENST00000498801	MAGIX	Q9H6Y5	334 aa		6.62	□□□□□ -1.35
GARNL3-222	ENST00000498801	TMEM27	Q9HBJ8	222 aa		6.62	□□□□□ -1.35
GARNL3-222	ENST00000498801	IL1RAP	Q9NPH3	570 aa		6.62	□□□□□ -1.35
GARNL3-222	ENST00000498801	ACER3	Q9NUN7	267 aa		6.62	□□□□□ -1.35
GARNL3-222	ENST00000498801	TBCCD1	Q9NVR7	557 aa		6.62	□□□□□ -1.35
GARNL3-222	ENST00000498801	RPS6KB2	Q9UBS0	482 aa		6.62	□□□□□ -1.35
GARNL3-222	ENST00000498801	AURKC	Q9UQB9	309 aa		6.62	□□□□□ -1.35
GARNL3-222	ENST00000498801	LIPG	Q9Y5X9	500 aa		6.62	□□□□□ -1.35
GARNL3-222	ENST00000498801	ENPP4	Q9Y6X5	453 aa		6.62	□□□□□ -1.35
GARNL3-222	ENST00000498801	DOPEY1	Q5JWR5	2465 aa		6.61	□□□□□ -1.35
GARNL3-222	ENST00000498801	HEATR5A	Q86XA9	2040 aa		6.61	□□□□□ -1.35
GARNL3-222	ENST00000498801		A0A0B4J2E0	115 aa		6.61	□□□□□ -1.35
GARNL3-222	ENST00000498801		A0A1B0GWA3	101 aa		6.61	□□□□□ -1.35
GARNL3-222	ENST00000498801		A0A1B0GX12	115 aa		6.61	□□□□□ -1.35
GARNL3-222	ENST00000498801	TRAPPC13	A5PLN9	417 aa		6.61	□□□□□ -1.35
GARNL3-222	ENST00000498801	hCG_2039718	K7EN88	272 aa		6.61	□□□□□ -1.35
GARNL3-222	ENST00000498801	BCKDK	O14874	412 aa		6.61	□□□□□ -1.35
GARNL3-222	ENST00000498801	WISP2	O76076	250 aa		6.61	□□□□□ -1.35
GARNL3-222	ENST00000498801	ACTL6A	O96019	429 aa		6.61	□□□□□ -1.35
GARNL3-222	ENST00000498801	FABP3	P05413	133 aa		6.61	□□□□□ -1.35
GARNL3-222	ENST00000498801	UMPS	P11172	480 aa		6.61	□□□□□ -1.35
GARNL3-222	ENST00000498801	HOXB6	P17509	224 aa	Known RBP	6.61	□□□□□ -1.35
GARNL3-222	ENST00000498801	IL11	P20809	199 aa		6.61	□□□□□ -1.35
GARNL3-222	ENST00000498801	GNLY	P22749	145 aa		6.61	□□□□□ -1.35
GARNL3-222	ENST00000498801	CHM	P24386	653 aa		6.61	□□□□□ -1.35
GARNL3-222	ENST00000498801	PSMA4	P25789	261 aa	Known RBP	6.61	□□□□□ -1.35
GARNL3-222	ENST00000498801	ELK4	P28324	431 aa		6.61	□□□□□ -1.35
GARNL3-222	ENST00000498801	PTGER4	P35408	488 aa		6.61	□□□□□ -1.35
GARNL3-222	ENST00000498801	GCK	P35557	465 aa		6.61	□□□□□ -1.35
GARNL3-222	ENST00000498801	APOBEC1	P41238	236 aa	Known RBP	6.61	□□□□□ -1.35
GARNL3-222	ENST00000498801	YAP1	P46937	504 aa	Known RBP	6.61	□□□□□ -1.35
GARNL3-222	ENST00000498801	UQCRFS1	P47985	274 aa		6.61	□□□□□ -1.35
GARNL3-222	ENST00000498801	POLR2H	P52434	150 aa	Known RBP	6.61	□□□□□ -1.35
GARNL3-222	ENST00000498801	TAS2R41	P59536	307 aa		6.61	□□□□□ -1.35
GARNL3-222	ENST00000498801	ACTR3	P61158	418 aa		6.61	□□□□□ -1.35
GARNL3-222	ENST00000498801	CHRNB3	Q05901	458 aa		6.61	□□□□□ -1.35
GARNL3-222	ENST00000498801	RBPJ	Q06330	500 aa		6.61	□□□□□ -1.35
GARNL3-222	ENST00000498801	CRYZ	Q08257	329 aa	Known RBP	6.61	□□□□□ -1.35
GARNL3-222	ENST00000498801	MERTK	Q12866	999 aa		6.61	□□□□□ -1.35
GARNL3-222	ENST00000498801	KPNB1	Q14974	876 aa	Known RBP	6.61	□□□□□ -1.35
GARNL3-222	ENST00000498801	BCL2A1	Q16548	175 aa		6.61	□□□□□ -1.35
GARNL3-222	ENST00000498801	ALG10B	Q5I7T1	473 aa		6.61	□□□□□ -1.35
GARNL3-222	ENST00000498801	AAGAB	Q6PD74	315 aa		6.61	□□□□□ -1.35
GARNL3-222	ENST00000498801	ZNF613	Q6PF04	617 aa		6.61	□□□□□ -1.35
GARNL3-222	ENST00000498801	ULK3	Q6PHR2	472 aa		6.61	□□□□□ -1.35
GARNL3-222	ENST00000498801	GFRAL	Q6UXV0	394 aa		6.61	□□□□□ -1.35
GARNL3-222	ENST00000498801	TSEN54	Q7Z6J9	526 aa	Known RBP	6.61	□□□□□ -1.35
GARNL3-222	ENST00000498801	CYP4Z1	Q86W10	505 aa		6.61	□□□□□ -1.35
GARNL3-222	ENST00000498801	ZDHHC21	Q8IVQ6	265 aa		6.61	□□□□□ -1.35
GARNL3-222	ENST00000498801	IZUMO1	Q8IYV9	350 aa		6.61	□□□□□ -1.35
GARNL3-222	ENST00000498801	LNX2	Q8N448	690 aa		6.61	□□□□□ -1.35
GARNL3-222	ENST00000498801	MBD3L2	Q8NHZ7	208 aa	Predicted RBP	6.61	□□□□□ -1.35
GARNL3-222	ENST00000498801	FAM57A	Q8TBR7	257 aa		6.61	□□□□□ -1.35
GARNL3-222	ENST00000498801	ADAMTS16	Q8TE57	1224 aa		6.61	□□□□□ -1.35
GARNL3-222	ENST00000498801	CANT1	Q8WVQ1	401 aa		6.61	□□□□□ -1.35
GARNL3-222	ENST00000498801	DNAJA4	Q8WW22	397 aa	Predicted RBP	6.61	□□□□□ -1.35
GARNL3-222	ENST00000498801	C3orf49	Q96BT1	292 aa		6.61	□□□□□ -1.35
GARNL3-222	ENST00000498801	C7orf34	Q96L11	122 aa		6.61	□□□□□ -1.35
GARNL3-222	ENST00000498801	PRRC1	Q96M27	445 aa		6.61	□□□□□ -1.35
GARNL3-222	ENST00000498801	ZNF300	Q96RE9	604 aa	Predicted RBP	6.61	□□□□□ -1.35
GARNL3-222	ENST00000498801	KRTAP4-12	Q9BQ66	201 aa		6.61	□□□□□ -1.35
GARNL3-222	ENST00000498801	POLR2J2	Q9GZM3	115 aa	Known RBP	6.61	□□□□□ -1.35
GARNL3-222	ENST00000498801	POLR2J3	Q9H1A7	115 aa	Known RBP	6.61	□□□□□ -1.35
GARNL3-222	ENST00000498801	DENND2D	Q9H6A0	471 aa	Predicted RBP	6.61	□□□□□ -1.35
GARNL3-222	ENST00000498801	EXO5	Q9H790	373 aa		6.61	□□□□□ -1.35
GARNL3-222	ENST00000498801	CTPS2	Q9NRF8	586 aa		6.61	□□□□□ -1.35
GARNL3-222	ENST00000498801	SELENON	Q9NZV5	590 aa		6.61	□□□□□ -1.35
GARNL3-222	ENST00000498801	NDUFAF4	Q9P032	175 aa		6.61	□□□□□ -1.35
GARNL3-222	ENST00000498801	OSGIN1	Q9UJX0	560 aa		6.61	□□□□□ -1.35
GARNL3-222	ENST00000498801	A4GNT	Q9UNA3	340 aa		6.61	□□□□□ -1.35
GARNL3-222	ENST00000498801	SLC6A5	Q9Y345	797 aa		6.61	□□□□□ -1.35
GARNL3-222	ENST00000498801	FAM32A	Q9Y421	112 aa	Known RBP	6.61	□□□□□ -1.35
GARNL3-222	ENST00000498801	LRRK2	Q5S007	2527 aa		6.61	□□□□□ -1.35
GARNL3-222	ENST00000498801	USP9X	Q93008	2570 aa	Predicted RBP	6.61	□□□□□ -1.35

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