RNA–Protein interactions for RNA: ENST00000498708.1

SPTA1-209, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 3

Gene SPTA1, Length 600 nt, Biotype retained intron, Subcellular localisation Cytosol, Dendrite .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-209ENST00000498708 SKP2Q13309 424 aa4.79□□□□□ -1.64
SPTA1-209ENST00000498708 LSM12Q3MHD2 195 aaKnown RBP4.79□□□□□ -1.64
SPTA1-209ENST00000498708 LRRC23Q53EV4 343 aaPredicted RBP4.79□□□□□ -1.64
SPTA1-209ENST00000498708 HIKESHIQ53FT3 197 aa4.79□□□□□ -1.64
SPTA1-209ENST00000498708 SLC25A53Q5H9E4 307 aa4.79□□□□□ -1.64
SPTA1-209ENST00000498708 TSPO2Q5TGU0 170 aa4.79□□□□□ -1.64
SPTA1-209ENST00000498708 THOC7Q6I9Y2 204 aaKnown RBP4.79□□□□□ -1.64
SPTA1-209ENST00000498708 ZNF544Q6NX49 715 aa4.79□□□□□ -1.64
SPTA1-209ENST00000498708 TNFAIP8L2Q6P589 184 aaPredicted RBP4.79□□□□□ -1.64
SPTA1-209ENST00000498708 EIF3MQ7L2H7 374 aaKnown RBP4.79□□□□□ -1.64
SPTA1-209ENST00000498708 C16orf62Q7Z3J2 963 aa4.79□□□□□ -1.64
SPTA1-209ENST00000498708 SPATA19Q7Z5L4 167 aa4.79□□□□□ -1.64
SPTA1-209ENST00000498708 MTDHQ86UE4 582 aaKnown RBP4.79□□□□□ -1.64
SPTA1-209ENST00000498708 P2RY8Q86VZ1 359 aa4.79□□□□□ -1.64
SPTA1-209ENST00000498708 ANKRD46Q86W74 232 aa4.79□□□□□ -1.64
SPTA1-209ENST00000498708 SNX32Q86XE0 403 aa4.79□□□□□ -1.64
SPTA1-209ENST00000498708 IFT20Q8IY31 132 aa4.79□□□□□ -1.64
SPTA1-209ENST00000498708 OR4A15Q8NGL6 344 aa4.79□□□□□ -1.64
SPTA1-209ENST00000498708 XAGE5Q8WWM1 108 aa4.79□□□□□ -1.64
SPTA1-209ENST00000498708 TMEM234Q8WY98 164 aa4.79□□□□□ -1.64
SPTA1-209ENST00000498708 ST8SIA1Q92185 356 aa4.79□□□□□ -1.64
SPTA1-209ENST00000498708 PPP1R14AQ96A00 147 aa4.79□□□□□ -1.64
SPTA1-209ENST00000498708 ZHX1-C8orf76Q96EF9 292 aa4.79□□□□□ -1.64
SPTA1-209ENST00000498708 ZNF764Q96H86 408 aaPredicted RBP4.79□□□□□ -1.64
SPTA1-209ENST00000498708 METTL2AQ96IZ6 378 aaKnown RBP4.79□□□□□ -1.64
SPTA1-209ENST00000498708 PPP3R2Q96LZ3 170 aa4.79□□□□□ -1.64
SPTA1-209ENST00000498708 CCDC140Q96MF4 163 aa4.79□□□□□ -1.64
SPTA1-209ENST00000498708 PIMREGQ9BSJ6 248 aa4.79□□□□□ -1.64
SPTA1-209ENST00000498708 TRMOQ9BU70 441 aa4.79□□□□□ -1.64
SPTA1-209ENST00000498708 FKRPQ9H9S5 495 aa4.79□□□□□ -1.64
SPTA1-209ENST00000498708 SLC17A5Q9NRA2 495 aa4.79□□□□□ -1.64
SPTA1-209ENST00000498708 SLC7A10Q9NS82 523 aa4.79□□□□□ -1.64
SPTA1-209ENST00000498708 ACER3Q9NUN7 267 aa4.79□□□□□ -1.64
SPTA1-209ENST00000498708 ATAD3AQ9NVI7 634 aa4.79□□□□□ -1.64
SPTA1-209ENST00000498708 TAS2R16Q9NYV7 291 aa4.79□□□□□ -1.64
SPTA1-209ENST00000498708 EMC3Q9P0I2 261 aa4.79□□□□□ -1.64
SPTA1-209ENST00000498708 PDP1Q9P0J1 537 aaPredicted RBP4.79□□□□□ -1.64
SPTA1-209ENST00000498708 SPIN1Q9Y657 262 aaPredicted RBP4.79□□□□□ -1.64
SPTA1-209ENST00000498708 TMED7-TICAM2A0A0A6YYA0 188 aa4.78□□□□□ -1.64
SPTA1-209ENST00000498708 IGHV1-18A0A0C4DH31 117 aa4.78□□□□□ -1.64
SPTA1-209ENST00000498708 GOLGA8QA0A0J9YX86 632 aa4.78□□□□□ -1.64
SPTA1-209ENST00000498708 SH3PXD2BA1X283 911 aa4.78□□□□□ -1.64
SPTA1-209ENST00000498708 GOLGA8OA6NCC3 632 aa4.78□□□□□ -1.64
SPTA1-209ENST00000498708 GOLGA8NF8WBI6 632 aa4.78□□□□□ -1.64
SPTA1-209ENST00000498708 LYNX1G3V0Z9 82 aa4.78□□□□□ -1.64
SPTA1-209ENST00000498708 H7C417 338 aa4.78□□□□□ -1.64
SPTA1-209ENST00000498708 NR5A2O00482 541 aa4.78□□□□□ -1.64
SPTA1-209ENST00000498708 ATP8B1O43520 1251 aa4.78□□□□□ -1.64
SPTA1-209ENST00000498708 STX11O75558 287 aa4.78□□□□□ -1.64
SPTA1-209ENST00000498708 LYPLA1O75608 230 aaPredicted RBP4.78□□□□□ -1.64
SPTA1-209ENST00000498708 KRT33AO76009 404 aa4.78□□□□□ -1.64
SPTA1-209ENST00000498708 AKR7A3O95154 331 aa4.78□□□□□ -1.64
SPTA1-209ENST00000498708 BAG2O95816 211 aa4.78□□□□□ -1.64
SPTA1-209ENST00000498708 VIMP08670 466 aaKnown RBP4.78□□□□□ -1.64
SPTA1-209ENST00000498708 NUDT17P0C025 328 aa4.78□□□□□ -1.64
SPTA1-209ENST00000498708 LYNX1P0DP58 116 aa4.78□□□□□ -1.64
SPTA1-209ENST00000498708 TROVE2P10155 538 aaKnown RBP eCLIP4.78□□□□□ -1.64
SPTA1-209ENST00000498708 G6PDP11413 515 aa4.78□□□□□ -1.64
SPTA1-209ENST00000498708 ZNF20P17024 532 aa4.78□□□□□ -1.64
SPTA1-209ENST00000498708 PGM1P36871 562 aa4.78□□□□□ -1.64
SPTA1-209ENST00000498708 APOBEC1P41238 236 aaKnown RBP4.78□□□□□ -1.64
SPTA1-209ENST00000498708 CDH15P55291 814 aa4.78□□□□□ -1.64
SPTA1-209ENST00000498708 NME5P56597 212 aa4.78□□□□□ -1.64
SPTA1-209ENST00000498708 PRPS1P60891 318 aa4.78□□□□□ -1.64
SPTA1-209ENST00000498708 NAA20P61599 178 aa4.78□□□□□ -1.64
SPTA1-209ENST00000498708 SNRPD2P62316 118 aaKnown RBP4.78□□□□□ -1.64
SPTA1-209ENST00000498708 CEACAM7Q14002 265 aa4.78□□□□□ -1.64
SPTA1-209ENST00000498708 ZNF141Q15928 474 aa4.78□□□□□ -1.64
SPTA1-209ENST00000498708 ARHGAP11BQ3KRB8 267 aa4.78□□□□□ -1.64
SPTA1-209ENST00000498708 UGT3A2Q3SY77 523 aa4.78□□□□□ -1.64
SPTA1-209ENST00000498708 ATP6AP1LQ52LC2 224 aa4.78□□□□□ -1.64
SPTA1-209ENST00000498708 GPAT3Q53EU6 434 aa4.78□□□□□ -1.64
SPTA1-209ENST00000498708 C6orf136Q5SQH8 315 aa4.78□□□□□ -1.64
SPTA1-209ENST00000498708 OR7E24Q6IFN5 339 aa4.78□□□□□ -1.64
SPTA1-209ENST00000498708 TYW3Q6IPR3 259 aaKnown RBP4.78□□□□□ -1.64
SPTA1-209ENST00000498708 KLHL24Q6TFL4 600 aa4.78□□□□□ -1.64
SPTA1-209ENST00000498708 AAED1Q7RTV5 226 aa4.78□□□□□ -1.64
SPTA1-209ENST00000498708 SLC46A3Q7Z3Q1 461 aa4.78□□□□□ -1.64
SPTA1-209ENST00000498708 GPAT4Q86UL3 456 aa4.78□□□□□ -1.64
SPTA1-209ENST00000498708 JAZF1Q86VZ6 243 aa4.78□□□□□ -1.64
SPTA1-209ENST00000498708 ADGRG3Q86Y34 549 aa4.78□□□□□ -1.64
SPTA1-209ENST00000498708 Q8N1Y9 231 aa4.78□□□□□ -1.64
SPTA1-209ENST00000498708 ZCCHC24Q8N2G6 241 aaKnown RBP4.78□□□□□ -1.64
SPTA1-209ENST00000498708 TMEM99Q8N816 258 aa4.78□□□□□ -1.64
SPTA1-209ENST00000498708 SPERTQ8NA61 448 aa4.78□□□□□ -1.64
SPTA1-209ENST00000498708 PIGXQ8TBF5 258 aa4.78□□□□□ -1.64
SPTA1-209ENST00000498708 SFXN5Q8TD22 340 aa4.78□□□□□ -1.64
SPTA1-209ENST00000498708 SLC25A43Q8WUT9 341 aaPredicted RBP4.78□□□□□ -1.64
SPTA1-209ENST00000498708 CNOT9Q92600 299 aaKnown RBP4.78□□□□□ -1.64
SPTA1-209ENST00000498708 DVL3Q92997 716 aaPredicted RBP4.78□□□□□ -1.64
SPTA1-209ENST00000498708 MOAP1Q96BY2 351 aa4.78□□□□□ -1.64
SPTA1-209ENST00000498708 TUBGCP3Q96CW5 907 aa4.78□□□□□ -1.64
SPTA1-209ENST00000498708 COQ8BQ96D53 544 aa4.78□□□□□ -1.64
SPTA1-209ENST00000498708 ZG16BQ96DA0 208 aa4.78□□□□□ -1.64
SPTA1-209ENST00000498708 NRBF2Q96F24 287 aa4.78□□□□□ -1.64
SPTA1-209ENST00000498708 AURKBQ96GD4 344 aaPredicted RBP4.78□□□□□ -1.64
SPTA1-209ENST00000498708 C8orf49Q96NF6 230 aa4.78□□□□□ -1.64
SPTA1-209ENST00000498708 MUS81Q96NY9 551 aa4.78□□□□□ -1.64
SPTA1-209ENST00000498708 ZNF385AQ96PM9 386 aaKnown RBP4.78□□□□□ -1.64
SPTA1-209ENST00000498708 PRPF18Q99633 342 aaKnown RBP4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms