RNA–Protein interactions for RNA: ENST00000498431.5

MUC1-220, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best)

Gene MUC1, Length 667 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-220ENST00000498431 FZR1Q9UM11 496 aa13.8□□□□□ -0.2
MUC1-220ENST00000498431 USP22Q9UPT9 525 aa13.8□□□□□ -0.2
MUC1-220ENST00000498431 TGP01266 2768 aa13.79□□□□□ -0.2
MUC1-220ENST00000498431 ZNF99A8MXY4 864 aaPredicted RBP13.79□□□□□ -0.2
MUC1-220ENST00000498431 M0R082 166 aa13.79□□□□□ -0.2
MUC1-220ENST00000498431 M0R3G1 203 aa13.79□□□□□ -0.2
MUC1-220ENST00000498431 TRAF3IP2O43734 574 aaPredicted RBP13.79□□□□□ -0.2
MUC1-220ENST00000498431 FZD7O75084 574 aa13.79□□□□□ -0.2
MUC1-220ENST00000498431 AVPP01185 164 aa13.79□□□□□ -0.2
MUC1-220ENST00000498431 GAAP10253 952 aa13.79□□□□□ -0.2
MUC1-220ENST00000498431 CD79AP11912 226 aa13.79□□□□□ -0.2
MUC1-220ENST00000498431 ZNF35P13682 527 aa13.79□□□□□ -0.2
MUC1-220ENST00000498431 ZNF14P17017 642 aaPredicted RBP13.79□□□□□ -0.2
MUC1-220ENST00000498431 EVX1P49640 407 aa13.79□□□□□ -0.2
MUC1-220ENST00000498431 LMO4P61968 165 aa13.79□□□□□ -0.2
MUC1-220ENST00000498431 PIGFQ07326 219 aa13.79□□□□□ -0.2
MUC1-220ENST00000498431 SLC9B1Q4ZJI4 515 aa13.79□□□□□ -0.2
MUC1-220ENST00000498431 CARD17Q5XLA6 110 aa13.79□□□□□ -0.2
MUC1-220ENST00000498431 OGFOD2Q6N063 350 aa13.79□□□□□ -0.2
MUC1-220ENST00000498431 SHQ1Q6PI26 577 aaKnown RBP13.79□□□□□ -0.2
MUC1-220ENST00000498431 PEG10Q86TG7 708 aaKnown RBP13.79□□□□□ -0.2
MUC1-220ENST00000498431 ZNF417Q8TAU3 575 aa13.79□□□□□ -0.2
MUC1-220ENST00000498431 ZNF418Q8TF45 676 aaPredicted RBP13.79□□□□□ -0.2
MUC1-220ENST00000498431 DYDC1Q8WWB3 177 aa13.79□□□□□ -0.2
MUC1-220ENST00000498431 TAAR8Q969N4 342 aa13.79□□□□□ -0.2
MUC1-220ENST00000498431 ZNF587Q96SQ5 575 aaPredicted RBP13.79□□□□□ -0.2
MUC1-220ENST00000498431 MEAF6Q9HAF1 191 aa13.79□□□□□ -0.2
MUC1-220ENST00000498431 ZNF275Q9NSD4 429 aaPredicted RBP13.79□□□□□ -0.2
MUC1-220ENST00000498431 PNPOQ9NVS9 261 aa13.79□□□□□ -0.2
MUC1-220ENST00000498431 ZNF224Q9NZL3 707 aa13.79□□□□□ -0.2
MUC1-220ENST00000498431 GRIP1Q9Y3R0 1128 aa13.79□□□□□ -0.2
MUC1-220ENST00000498431 HPRP00739 348 aa13.78□□□□□ -0.2
MUC1-220ENST00000498431 TFP02787 698 aa13.78□□□□□ -0.2
MUC1-220ENST00000498431 HLA-DOBP13765 273 aa13.78□□□□□ -0.2
MUC1-220ENST00000498431 BGNP21810 368 aa13.78□□□□□ -0.2
MUC1-220ENST00000498431 ACHEP22303 614 aa13.78□□□□□ -0.2
MUC1-220ENST00000498431 CBLP22681 906 aa13.78□□□□□ -0.2
MUC1-220ENST00000498431 GTF2E2P29084 291 aaKnown RBP13.78□□□□□ -0.2
MUC1-220ENST00000498431 GRPRP30550 384 aa13.78□□□□□ -0.2
MUC1-220ENST00000498431 CRATP43155 626 aa13.78□□□□□ -0.2
MUC1-220ENST00000498431 SLC1A6P48664 564 aa13.78□□□□□ -0.2
MUC1-220ENST00000498431 CRISP3P54108 245 aa13.78□□□□□ -0.2
MUC1-220ENST00000498431 AQP5P55064 265 aa13.78□□□□□ -0.2
MUC1-220ENST00000498431 HILS1P60008 231 aa13.78□□□□□ -0.2
MUC1-220ENST00000498431 STX3Q13277 289 aa13.78□□□□□ -0.2
MUC1-220ENST00000498431 C1DQ13901 141 aaKnown RBP13.78□□□□□ -0.2
MUC1-220ENST00000498431 LARS2Q15031 903 aaKnown RBP13.78□□□□□ -0.2
MUC1-220ENST00000498431 GTDC1Q4AE62 458 aa13.78□□□□□ -0.2
MUC1-220ENST00000498431 FAHD2BQ6P2I3 314 aaPredicted RBP13.78□□□□□ -0.2
MUC1-220ENST00000498431 CCDC36Q8IYA8 594 aa13.78□□□□□ -0.2
MUC1-220ENST00000498431 PIK3C3Q8NEB9 887 aa13.78□□□□□ -0.2
MUC1-220ENST00000498431 SGMS2Q8NHU3 365 aa13.78□□□□□ -0.2
MUC1-220ENST00000498431 FAM216AQ8WUB2 273 aa13.78□□□□□ -0.2
MUC1-220ENST00000498431 RDH5Q92781 318 aa13.78□□□□□ -0.2
MUC1-220ENST00000498431 ZMYND19Q96E35 227 aaPredicted RBP13.78□□□□□ -0.2
MUC1-220ENST00000498431 FAHD2AQ96GK7 314 aa13.78□□□□□ -0.2
MUC1-220ENST00000498431 TMEM19Q96HH6 336 aa13.78□□□□□ -0.2
MUC1-220ENST00000498431 EMC6Q9BV81 110 aa13.78□□□□□ -0.2
MUC1-220ENST00000498431 SPATA9Q9BWV2 254 aa13.78□□□□□ -0.2
MUC1-220ENST00000498431 RSPO3Q9BXY4 272 aaPredicted RBP13.78□□□□□ -0.2
MUC1-220ENST00000498431 MS4A5Q9H3V2 200 aa13.78□□□□□ -0.2
MUC1-220ENST00000498431 HAO1Q9UJM8 370 aa13.78□□□□□ -0.2
MUC1-220ENST00000498431 PRDM4Q9UKN5 801 aa13.78□□□□□ -0.2
MUC1-220ENST00000498431 PCDHB10Q9UN67 800 aa13.78□□□□□ -0.2
MUC1-220ENST00000498431 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.78□□□□□ -0.2
MUC1-220ENST00000498431 IGKV1D-42A0A075B6H8 117 aa13.77□□□□□ -0.21
MUC1-220ENST00000498431 LOC105371242A0A075B767 164 aa13.77□□□□□ -0.21
MUC1-220ENST00000498431 SDHDO14521 159 aa13.77□□□□□ -0.21
MUC1-220ENST00000498431 RFXANKO14593 260 aa13.77□□□□□ -0.21
MUC1-220ENST00000498431 AIM2O14862 343 aa13.77□□□□□ -0.21
MUC1-220ENST00000498431 RP2O75695 350 aa13.77□□□□□ -0.21
MUC1-220ENST00000498431 KRT75O95678 551 aa13.77□□□□□ -0.21
MUC1-220ENST00000498431 NAT2P11245 290 aa13.77□□□□□ -0.21
MUC1-220ENST00000498431 EPHA1P21709 976 aa13.77□□□□□ -0.21
MUC1-220ENST00000498431 DSTNP60981 165 aa13.77□□□□□ -0.21
MUC1-220ENST00000498431 GSG1Q2KHT4 349 aa13.77□□□□□ -0.21
MUC1-220ENST00000498431 C20orf196Q8IYI0 205 aa13.77□□□□□ -0.21
MUC1-220ENST00000498431 OR51F2Q8NH61 342 aa13.77□□□□□ -0.21
MUC1-220ENST00000498431 VPS33AQ96AX1 596 aa13.77□□□□□ -0.21
MUC1-220ENST00000498431 CALML5Q9NZT1 146 aa13.77□□□□□ -0.21
MUC1-220ENST00000498431 GPR45Q9Y5Y3 372 aa13.77□□□□□ -0.21
MUC1-220ENST00000498431 MS4A18H0YCH9 400 aa13.76□□□□□ -0.21
MUC1-220ENST00000498431 PPIHO43447 177 aaKnown RBP13.76□□□□□ -0.21
MUC1-220ENST00000498431 B4GALT1P15291 398 aa13.76□□□□□ -0.21
MUC1-220ENST00000498431 GLRXP35754 106 aa13.76□□□□□ -0.21
MUC1-220ENST00000498431 PTDSS1P48651 473 aaKnown RBP13.76□□□□□ -0.21
MUC1-220ENST00000498431 ARFIP2P53365 341 aa13.76□□□□□ -0.21
MUC1-220ENST00000498431 FXNQ16595 210 aa13.76□□□□□ -0.21
MUC1-220ENST00000498431 TRMT5Q32P41 509 aaKnown RBP13.76□□□□□ -0.21
MUC1-220ENST00000498431 MS4A18Q3C1V0 323 aa13.76□□□□□ -0.21
MUC1-220ENST00000498431 ALKBH6Q3KRA9 238 aa13.76□□□□□ -0.21
MUC1-220ENST00000498431 C6orf89Q6UWU4 347 aa13.76□□□□□ -0.21
MUC1-220ENST00000498431 ZNF813Q6ZN06 617 aa13.76□□□□□ -0.21
MUC1-220ENST00000498431 USP43Q70EL4 1123 aa13.76□□□□□ -0.21
MUC1-220ENST00000498431 H1FNTQ75WM6 255 aaPredicted RBP13.76□□□□□ -0.21
MUC1-220ENST00000498431 G6PC2Q9NQR9 355 aa13.76□□□□□ -0.21
MUC1-220ENST00000498431 ZNF232Q9UNY5 417 aa13.76□□□□□ -0.21
MUC1-220ENST00000498431 A0A0G2JPF8 293 aa13.75□□□□□ -0.21
MUC1-220ENST00000498431 LOC102725191A0A1B0GVB3 256 aa13.75□□□□□ -0.21
MUC1-220ENST00000498431 HNRNPCL2B2RXH8 293 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms