RNA–Protein interactions for RNA: ENST00000498041.1

RIF1-212, Transcript of replication timing regulatory factor 1, humanhuman

TSL 3

Gene RIF1, Length 776 nt, Biotype processed transcript, Subcellular localisation Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-212ENST00000498041 GPATCH11Q8N954 259 aa2.09□□□□□ -2.07
RIF1-212ENST00000498041 DNAAF3Q8N9W5 541 aa2.09□□□□□ -2.07
RIF1-212ENST00000498041 OR2A12Q8NGT7 310 aa2.09□□□□□ -2.07
RIF1-212ENST00000498041 OR4A16Q8NH70 328 aa2.09□□□□□ -2.07
RIF1-212ENST00000498041 ZNF671Q8TAW3 534 aa2.09□□□□□ -2.07
RIF1-212ENST00000498041 SPPL2BQ8TCT7 592 aa2.09□□□□□ -2.07
RIF1-212ENST00000498041 VN1R17PQ8TDU5 208 aa2.09□□□□□ -2.07
RIF1-212ENST00000498041 EEF1AKMT1Q8WVE0 214 aa2.09□□□□□ -2.07
RIF1-212ENST00000498041 C10orf82Q8WW14 230 aa2.09□□□□□ -2.07
RIF1-212ENST00000498041 PATE1Q8WXA2 126 aa2.09□□□□□ -2.07
RIF1-212ENST00000498041 PTP4A1Q93096 173 aa2.09□□□□□ -2.07
RIF1-212ENST00000498041 BIRC7Q96CA5 298 aa2.09□□□□□ -2.07
RIF1-212ENST00000498041 LRRC45Q96CN5 670 aa2.09□□□□□ -2.07
RIF1-212ENST00000498041 CERS2Q96G23 380 aa2.09□□□□□ -2.07
RIF1-212ENST00000498041 ELMO2Q96JJ3 720 aa2.09□□□□□ -2.07
RIF1-212ENST00000498041 TEX37Q96LM6 180 aa2.09□□□□□ -2.07
RIF1-212ENST00000498041 SERPINB11Q96P15 392 aa2.09□□□□□ -2.07
RIF1-212ENST00000498041 TMEM237Q96Q45 408 aa2.09□□□□□ -2.07
RIF1-212ENST00000498041 OR52B2Q96RD2 323 aa2.09□□□□□ -2.07
RIF1-212ENST00000498041 CDX2Q99626 313 aaPredicted RBP2.09□□□□□ -2.07
RIF1-212ENST00000498041 BBS2Q9BXC9 721 aa2.09□□□□□ -2.07
RIF1-212ENST00000498041 RSPO3Q9BXY4 272 aaPredicted RBP2.09□□□□□ -2.07
RIF1-212ENST00000498041 CAPS2Q9BXY5 557 aa2.09□□□□□ -2.07
RIF1-212ENST00000498041 MRPL9Q9BYD2 267 aaKnown RBP2.09□□□□□ -2.07
RIF1-212ENST00000498041 YTHDF1Q9BYJ9 559 aaKnown RBP2.09□□□□□ -2.07
RIF1-212ENST00000498041 AICDAQ9GZX7 198 aa2.09□□□□□ -2.07
RIF1-212ENST00000498041 NACA2Q9H009 215 aa2.09□□□□□ -2.07
RIF1-212ENST00000498041 RAB17Q9H0T7 212 aa2.09□□□□□ -2.07
RIF1-212ENST00000498041 SLC25A51Q9H1U9 297 aa2.09□□□□□ -2.07
RIF1-212ENST00000498041 TIGARQ9NQ88 270 aa2.09□□□□□ -2.07
RIF1-212ENST00000498041 PRSS16Q9NQE7 514 aa2.09□□□□□ -2.07
RIF1-212ENST00000498041 DNAJC11Q9NVH1 559 aa2.09□□□□□ -2.07
RIF1-212ENST00000498041 DUS2Q9NX74 493 aaKnown RBP2.09□□□□□ -2.07
RIF1-212ENST00000498041 UTP6Q9NYH9 597 aaKnown RBP2.09□□□□□ -2.07
RIF1-212ENST00000498041 LGALS13Q9UHV8 139 aa2.09□□□□□ -2.07
RIF1-212ENST00000498041 STAP1Q9ULZ2 295 aa2.09□□□□□ -2.07
RIF1-212ENST00000498041 BTRCQ9Y297 605 aa2.09□□□□□ -2.07
RIF1-212ENST00000498041 ZNF256Q9Y2P7 627 aaPredicted RBP2.09□□□□□ -2.07
RIF1-212ENST00000498041 MRPS2Q9Y399 296 aaKnown RBP2.09□□□□□ -2.07
RIF1-212ENST00000498041 SBDSQ9Y3A5 250 aaKnown RBP eCLIP2.09□□□□□ -2.07
RIF1-212ENST00000498041 LRP4O75096 1905 aa2.09□□□□□ -2.08
RIF1-212ENST00000498041 EML6Q6ZMW3 1958 aa2.09□□□□□ -2.08
RIF1-212ENST00000498041 MDC1Q14676 2089 aaKnown RBP2.08□□□□□ -2.08
RIF1-212ENST00000498041 CHD6Q8TD26 2715 aa2.08□□□□□ -2.08
RIF1-212ENST00000498041 TRAV19A0A0A6YYK7 116 aa2.08□□□□□ -2.08
RIF1-212ENST00000498041 LOC100653049A0A140TA62 436 aa2.08□□□□□ -2.08
RIF1-212ENST00000498041 HSFX4A0A1B0GTS1 333 aaPredicted RBP2.08□□□□□ -2.08
RIF1-212ENST00000498041 HSFX3A0A1B0GWH4 333 aaPredicted RBP2.08□□□□□ -2.08
RIF1-212ENST00000498041 C5orf51A6NDU8 294 aa2.08□□□□□ -2.08
RIF1-212ENST00000498041 FAM47DPA6NHR8 397 aa2.08□□□□□ -2.08
RIF1-212ENST00000498041 OR2AG2A6NM03 316 aa2.08□□□□□ -2.08
RIF1-212ENST00000498041 CCT8L1PA6NM43 557 aa2.08□□□□□ -2.08
RIF1-212ENST00000498041 C5orf67F2Z3F1 127 aa2.08□□□□□ -2.08
RIF1-212ENST00000498041 SH2D1BO14796 132 aa2.08□□□□□ -2.08
RIF1-212ENST00000498041 EIF3HO15372 352 aaKnown RBP eCLIP2.08□□□□□ -2.083e-6■■■■□ 19.7
RIF1-212ENST00000498041 TRAPPC3O43617 180 aa2.08□□□□□ -2.08
RIF1-212ENST00000498041 PLIN3O60664 434 aa2.08□□□□□ -2.08
RIF1-212ENST00000498041 FMO6PO60774 539 aa2.08□□□□□ -2.08
RIF1-212ENST00000498041 SHOX2O60902 331 aaPredicted RBP2.08□□□□□ -2.08
RIF1-212ENST00000498041 TSC22D2O75157 780 aa2.08□□□□□ -2.08
RIF1-212ENST00000498041 ECI2O75521 394 aa2.08□□□□□ -2.08
RIF1-212ENST00000498041 KRT34O76011 436 aa2.08□□□□□ -2.08
RIF1-212ENST00000498041 TRIM16O95361 564 aa2.08□□□□□ -2.08
RIF1-212ENST00000498041 GUCA1CO95843 209 aa2.08□□□□□ -2.08
RIF1-212ENST00000498041 TSPAN12O95859 305 aa2.08□□□□□ -2.08
RIF1-212ENST00000498041 MT-ND3P03897 115 aa2.08□□□□□ -2.08
RIF1-212ENST00000498041 BPGMP07738 259 aa2.08□□□□□ -2.08
RIF1-212ENST00000498041 SLC35E2BP0CK96 405 aa2.08□□□□□ -2.08
RIF1-212ENST00000498041 BCKDHBP21953 392 aa2.08□□□□□ -2.08
RIF1-212ENST00000498041 AK4P27144 223 aaPredicted RBP2.08□□□□□ -2.08
RIF1-212ENST00000498041 IL12AP29459 219 aa2.08□□□□□ -2.08
RIF1-212ENST00000498041 CCR7P32248 378 aa2.08□□□□□ -2.08
RIF1-212ENST00000498041 RFC2P35250 354 aa2.08□□□□□ -2.08
RIF1-212ENST00000498041 MDH2P40926 338 aaKnown RBP2.08□□□□□ -2.08
RIF1-212ENST00000498041 PSMD8P48556 350 aa2.08□□□□□ -2.08
RIF1-212ENST00000498041 TUFMP49411 452 aaKnown RBP2.08□□□□□ -2.08
RIF1-212ENST00000498041 MEOX2P50222 304 aa2.08□□□□□ -2.08
RIF1-212ENST00000498041 CCNHP51946 323 aaPredicted RBP2.08□□□□□ -2.08
RIF1-212ENST00000498041 SLC25A1P53007 311 aa2.08□□□□□ -2.08
RIF1-212ENST00000498041 CDH4P55283 916 aa2.08□□□□□ -2.08
RIF1-212ENST00000498041 KRTAP12-2P59991 146 aa2.08□□□□□ -2.08
RIF1-212ENST00000498041 RHOAP61586 193 aa2.08□□□□□ -2.08
RIF1-212ENST00000498041 PPP1CAP62136 330 aa2.08□□□□□ -2.08
RIF1-212ENST00000498041 C1orf61Q13536 156 aa2.08□□□□□ -2.08
RIF1-212ENST00000498041 PDE7AQ13946 482 aa2.08□□□□□ -2.08
RIF1-212ENST00000498041 SELPLGQ14242 412 aa2.08□□□□□ -2.08
RIF1-212ENST00000498041 EXOSC7Q15024 291 aaKnown RBP2.08□□□□□ -2.08
RIF1-212ENST00000498041 GSG1Q2KHT4 349 aa2.08□□□□□ -2.08
RIF1-212ENST00000498041 ZNF674Q2M3X9 581 aa2.08□□□□□ -2.08
RIF1-212ENST00000498041 HKDC1Q2TB90 917 aa2.08□□□□□ -2.08
RIF1-212ENST00000498041 CARD16Q5EG05 197 aa2.08□□□□□ -2.08
RIF1-212ENST00000498041 BRMS1LQ5PSV4 323 aa2.08□□□□□ -2.08
RIF1-212ENST00000498041 RABGAP1LQ5R372 815 aa2.08□□□□□ -2.08
RIF1-212ENST00000498041 LRRC66Q68CR7 880 aa2.08□□□□□ -2.08
RIF1-212ENST00000498041 ANKRD26P1Q6NSI1 321 aa2.08□□□□□ -2.08
RIF1-212ENST00000498041 C22orf39Q6P5X5 142 aa2.08□□□□□ -2.08
RIF1-212ENST00000498041 CERS6Q6ZMG9 384 aa2.08□□□□□ -2.08
RIF1-212ENST00000498041 GCNT7Q6ZNI0 430 aa2.08□□□□□ -2.08
RIF1-212ENST00000498041 TRMT10CQ7L0Y3 403 aaKnown RBP2.08□□□□□ -2.08
RIF1-212ENST00000498041 ARCQ7LC44 396 aa2.08□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms