RNA–Protein interactions for RNA: ENST00000497580.5

GAPVD1-220, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2

Gene GAPVD1, Length 3,720 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-220ENST00000497580 SLC35A3Q9Y2D2 325 aa11.98□□□□□ -0.49
GAPVD1-220ENST00000497580 C5orf52A6NGY3 159 aa11.98□□□□□ -0.49
GAPVD1-220ENST00000497580 LRRC72A6NJI9 287 aa11.98□□□□□ -0.49
GAPVD1-220ENST00000497580 OR2F2O95006 317 aa11.98□□□□□ -0.49
GAPVD1-220ENST00000497580 RCBTB2O95199 551 aa11.98□□□□□ -0.49
GAPVD1-220ENST00000497580 C6P13671 934 aa11.98□□□□□ -0.49
GAPVD1-220ENST00000497580 CD53P19397 219 aa11.98□□□□□ -0.49
GAPVD1-220ENST00000497580 AK4P27144 223 aaPredicted RBP11.98□□□□□ -0.49
GAPVD1-220ENST00000497580 EFNB2P52799 333 aa11.98□□□□□ -0.49
GAPVD1-220ENST00000497580 OR2F1Q13607 317 aa11.98□□□□□ -0.49
GAPVD1-220ENST00000497580 FAM76BQ5HYJ3 339 aa11.98□□□□□ -0.49
GAPVD1-220ENST00000497580 CYB5R2Q6BCY4 276 aa11.98□□□□□ -0.49
GAPVD1-220ENST00000497580 STEAP1BQ6NZ63 245 aa11.98□□□□□ -0.49
GAPVD1-220ENST00000497580 ACOT7LQ6ZUV0 252 aa11.98□□□□□ -0.49
GAPVD1-220ENST00000497580 STX12Q86Y82 276 aa11.98□□□□□ -0.49
GAPVD1-220ENST00000497580 SLC35F2Q8IXU6 374 aa11.98□□□□□ -0.49
GAPVD1-220ENST00000497580 INPP5EQ9NRR6 644 aa11.98□□□□□ -0.49
GAPVD1-220ENST00000497580 TNFSF18Q9UNG2 199 aa11.98□□□□□ -0.49
GAPVD1-220ENST00000497580 DTX4Q9Y2E6 619 aa11.98□□□□□ -0.49
GAPVD1-220ENST00000497580 RNF222A6NCQ9 220 aa11.97□□□□□ -0.49
GAPVD1-220ENST00000497580 COLCA2A8K830 154 aa11.97□□□□□ -0.49
GAPVD1-220ENST00000497580 CACNB4O00305 520 aaPredicted RBP11.97□□□□□ -0.49
GAPVD1-220ENST00000497580 RAB3DO95716 219 aa11.97□□□□□ -0.49
GAPVD1-220ENST00000497580 SFTA3P0C7M3 94 aa11.97□□□□□ -0.49
GAPVD1-220ENST00000497580 NME2P22392 152 aa11.97□□□□□ -0.49
GAPVD1-220ENST00000497580 GPX4P36969 197 aaPredicted RBP11.97□□□□□ -0.49
GAPVD1-220ENST00000497580 MNDAP41218 407 aa11.97□□□□□ -0.49
GAPVD1-220ENST00000497580 ACTC1P68032 377 aa11.97□□□□□ -0.49
GAPVD1-220ENST00000497580 ACTA1P68133 377 aa11.97□□□□□ -0.49
GAPVD1-220ENST00000497580 ALKBH1Q13686 389 aaKnown RBP11.97□□□□□ -0.49
GAPVD1-220ENST00000497580 ZNF124Q15973 351 aa11.97□□□□□ -0.49
GAPVD1-220ENST00000497580 RNF212Q495C1 297 aa11.97□□□□□ -0.49
GAPVD1-220ENST00000497580 EXOSC6Q5RKV6 272 aaKnown RBP11.97□□□□□ -0.49
GAPVD1-220ENST00000497580 CD163Q86VB7 1156 aa11.97□□□□□ -0.49
GAPVD1-220ENST00000497580 OR6N1Q8NGY5 312 aa11.97□□□□□ -0.49
GAPVD1-220ENST00000497580 CYB5D2Q8WUJ1 264 aa11.97□□□□□ -0.49
GAPVD1-220ENST00000497580 GLYATL1Q969I3 302 aa11.97□□□□□ -0.49
GAPVD1-220ENST00000497580 BPIFA2Q96DR5 249 aa11.97□□□□□ -0.49
GAPVD1-220ENST00000497580 TNFRSF13CQ96RJ3 184 aa11.97□□□□□ -0.49
GAPVD1-220ENST00000497580 KLF16Q9BXK1 252 aaPredicted RBP11.97□□□□□ -0.49
GAPVD1-220ENST00000497580 MS4A8Q9BY19 250 aa11.97□□□□□ -0.49
GAPVD1-220ENST00000497580 BCL2L10Q9HD36 194 aa11.97□□□□□ -0.49
GAPVD1-220ENST00000497580 SMCO4Q9NRQ5 59 aa11.97□□□□□ -0.49
GAPVD1-220ENST00000497580 ZNF346Q9UL40 294 aaKnown RBP11.97□□□□□ -0.49
GAPVD1-220ENST00000497580 WDR45Q9Y484 360 aa11.97□□□□□ -0.49
GAPVD1-220ENST00000497580 TRAPPC13A5PLN9 417 aa11.97□□□□□ -0.49
GAPVD1-220ENST00000497580 PAPLNO95428 1278 aa11.97□□□□□ -0.49
GAPVD1-220ENST00000497580 RAB40ALP0C0E4 278 aa11.97□□□□□ -0.49
GAPVD1-220ENST00000497580 MUC1P15941 1255 aaPredicted RBP11.97□□□□□ -0.49
GAPVD1-220ENST00000497580 SPI1P17947 270 aa11.97□□□□□ -0.49
GAPVD1-220ENST00000497580 RPL4P36578 427 aaKnown RBP11.97□□□□□ -0.49
GAPVD1-220ENST00000497580 TEX19Q8NA77 164 aa11.97□□□□□ -0.49
GAPVD1-220ENST00000497580 PCSK9Q8NBP7 692 aaKnown RBP11.97□□□□□ -0.49
GAPVD1-220ENST00000497580 RAB40AQ8WXH6 277 aa11.97□□□□□ -0.49
GAPVD1-220ENST00000497580 CNN2Q99439 309 aaKnown RBP11.97□□□□□ -0.49
GAPVD1-220ENST00000497580 C6orf106Q9H6K1 298 aaPredicted RBP11.97□□□□□ -0.49
GAPVD1-220ENST00000497580 WBP1LQ9NX94 342 aa11.97□□□□□ -0.49
GAPVD1-220ENST00000497580 CLDND1Q9NY35 253 aa11.97□□□□□ -0.49
GAPVD1-220ENST00000497580 RANBP2P49792 3224 aaKnown RBP11.97□□□□□ -0.49
GAPVD1-220ENST00000497580 GLSO94925 669 aaPredicted RBP11.97□□□□□ -0.49
GAPVD1-220ENST00000497580 ZFPL1O95159 310 aa11.97□□□□□ -0.49
GAPVD1-220ENST00000497580 TBX6O95947 436 aaPredicted RBP11.97□□□□□ -0.49
GAPVD1-220ENST00000497580 CSF1P09603 554 aa11.97□□□□□ -0.49
GAPVD1-220ENST00000497580 ZNF28P17035 718 aa11.97□□□□□ -0.49
GAPVD1-220ENST00000497580 CTGFP29279 349 aa11.97□□□□□ -0.49
GAPVD1-220ENST00000497580 SSTP61278 116 aa11.97□□□□□ -0.49
GAPVD1-220ENST00000497580 EID2Q8N6I1 236 aa11.97□□□□□ -0.49
GAPVD1-220ENST00000497580 SLC16A11Q8NCK7 471 aa11.97□□□□□ -0.49
GAPVD1-220ENST00000497580 CDS1Q92903 461 aa11.97□□□□□ -0.49
GAPVD1-220ENST00000497580 NKD1Q969G9 470 aa11.97□□□□□ -0.49
GAPVD1-220ENST00000497580 MIB2Q96AX9 1013 aa11.97□□□□□ -0.49
GAPVD1-220ENST00000497580 LYSMD1Q96S90 227 aa11.97□□□□□ -0.49
GAPVD1-220ENST00000497580 MYADMQ96S97 322 aa11.97□□□□□ -0.49
GAPVD1-220ENST00000497580 ARHGDIGQ99819 225 aa11.97□□□□□ -0.49
GAPVD1-220ENST00000497580 TCEAL7Q9BRU2 100 aa11.97□□□□□ -0.49
GAPVD1-220ENST00000497580 ULBP3Q9BZM4 244 aa11.97□□□□□ -0.49
GAPVD1-220ENST00000497580 RHOFQ9HBH0 211 aa11.97□□□□□ -0.49
GAPVD1-220ENST00000497580 NCDNQ9UBB6 729 aa11.97□□□□□ -0.49
GAPVD1-220ENST00000497580 IKZF2Q9UKS7 526 aa11.97□□□□□ -0.49
GAPVD1-220ENST00000497580 A0A1W2PPH5 198 aa11.96□□□□□ -0.49
GAPVD1-220ENST00000497580 NEDD8-MDP1E9PL57 170 aa11.96□□□□□ -0.49
GAPVD1-220ENST00000497580 H7C417 338 aa11.96□□□□□ -0.49
GAPVD1-220ENST00000497580 GPR37O15354 613 aa11.96□□□□□ -0.49
GAPVD1-220ENST00000497580 GREM1O60565 184 aa11.96□□□□□ -0.49
GAPVD1-220ENST00000497580 OR8G3PP0DMU2 310 aa11.96□□□□□ -0.49
GAPVD1-220ENST00000497580 LAMP2P13473 410 aa11.96□□□□□ -0.49
GAPVD1-220ENST00000497580 EPHB3P54753 998 aa11.96□□□□□ -0.49
GAPVD1-220ENST00000497580 MRPS10P82664 201 aaKnown RBP11.96□□□□□ -0.49
GAPVD1-220ENST00000497580 SKA3Q8IX90 412 aa11.96□□□□□ -0.49
GAPVD1-220ENST00000497580 ZBTB8AQ96BR9 441 aa11.96□□□□□ -0.49
GAPVD1-220ENST00000497580 AKR1E2Q96JD6 320 aa11.96□□□□□ -0.49
GAPVD1-220ENST00000497580 SGPP1Q9BX95 441 aa11.96□□□□□ -0.49
GAPVD1-220ENST00000497580 UFSP2Q9NUQ7 469 aa11.96□□□□□ -0.49
GAPVD1-220ENST00000497580 MTFP1Q9UDX5 166 aa11.96□□□□□ -0.49
GAPVD1-220ENST00000497580 KIAA1671Q9BY89 1806 aa11.96□□□□□ -0.49
GAPVD1-220ENST00000497580 GXYLT2A0PJZ3 443 aa11.96□□□□□ -0.49
GAPVD1-220ENST00000497580 ZNF208O43345 1280 aa11.96□□□□□ -0.49
GAPVD1-220ENST00000497580 ERI3O43414 337 aaKnown RBP11.96□□□□□ -0.49
GAPVD1-220ENST00000497580 PQBP1O60828 265 aaKnown RBP11.96□□□□□ -0.49
GAPVD1-220ENST00000497580 FBP1P09467 338 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 474.6 ms