RNA–Protein interactions for RNA: ENST00000497488.1

BRCA1-224, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-224ENST00000497488 PVRIGQ6DKI7 326 aa5.12□□□□□ -1.59
BRCA1-224ENST00000497488 C9orf139Q6ZV77 190 aa5.12□□□□□ -1.59
BRCA1-224ENST00000497488 STOX1Q6ZVD7 989 aa5.12□□□□□ -1.59
BRCA1-224ENST00000497488 SLC35D2Q76EJ3 337 aa5.12□□□□□ -1.59
BRCA1-224ENST00000497488 PRSS48Q7RTY5 328 aa5.12□□□□□ -1.59
BRCA1-224ENST00000497488 RBM23Q86U06 439 aaKnown RBP5.12□□□□□ -1.59
BRCA1-224ENST00000497488 SLC39A11Q8N1S5 342 aa5.12□□□□□ -1.59
BRCA1-224ENST00000497488 SYS1Q8N2H4 156 aa5.12□□□□□ -1.59
BRCA1-224ENST00000497488 TRAM1L1Q8N609 369 aa5.12□□□□□ -1.59
BRCA1-224ENST00000497488 OR5T2Q8NGG2 359 aa5.12□□□□□ -1.59
BRCA1-224ENST00000497488 OR56A4Q8NGH8 313 aa5.12□□□□□ -1.59
BRCA1-224ENST00000497488 GTF2H4Q92759 462 aa5.12□□□□□ -1.59
BRCA1-224ENST00000497488 RCHY1Q96PM5 261 aa5.12□□□□□ -1.59
BRCA1-224ENST00000497488 ALKBH3Q96Q83 286 aaPredicted RBP5.12□□□□□ -1.59
BRCA1-224ENST00000497488 LRRC19Q9H756 370 aa5.12□□□□□ -1.59
BRCA1-224ENST00000497488 OR2S2Q9NQN1 319 aa5.12□□□□□ -1.59
BRCA1-224ENST00000497488 RBAKQ9NYW8 714 aaPredicted RBP5.12□□□□□ -1.59
BRCA1-224ENST00000497488 SLC17A7Q9P2U7 560 aa5.12□□□□□ -1.59
BRCA1-224ENST00000497488 SEC14L4Q9UDX3 406 aa5.12□□□□□ -1.59
BRCA1-224ENST00000497488 HMGXB4Q9UGU5 601 aa5.12□□□□□ -1.59
BRCA1-224ENST00000497488 KIF25Q9UIL4 384 aa5.12□□□□□ -1.59
BRCA1-224ENST00000497488 SCML1Q9UN30 329 aa5.12□□□□□ -1.59
BRCA1-224ENST00000497488 SLC17A4Q9Y2C5 497 aa5.12□□□□□ -1.59
BRCA1-224ENST00000497488 ZNF831Q5JPB2 1677 aa5.12□□□□□ -1.59
BRCA1-224ENST00000497488 UBR2Q8IWV8 1755 aa5.11□□□□□ -1.59
BRCA1-224ENST00000497488 IGHV4OR15-8A0A075B7B6 117 aa5.11□□□□□ -1.59
BRCA1-224ENST00000497488 HSFX4A0A1B0GTS1 333 aaPredicted RBP5.11□□□□□ -1.59
BRCA1-224ENST00000497488 A0A1B0GW15 77 aa5.11□□□□□ -1.59
BRCA1-224ENST00000497488 HSFX3A0A1B0GWH4 333 aaPredicted RBP5.11□□□□□ -1.59
BRCA1-224ENST00000497488 CENPXA8MT69 81 aa5.11□□□□□ -1.59
BRCA1-224ENST00000497488 TRDCB7Z8K6 153 aa5.11□□□□□ -1.59
BRCA1-224ENST00000497488 E7EWF7 191 aa5.11□□□□□ -1.59
BRCA1-224ENST00000497488 FCN1O00602 326 aa5.11□□□□□ -1.59
BRCA1-224ENST00000497488 TOR1AO14656 332 aa5.11□□□□□ -1.59
BRCA1-224ENST00000497488 INPP4BO15327 924 aa5.11□□□□□ -1.59
BRCA1-224ENST00000497488 ZW10O43264 779 aa5.11□□□□□ -1.59
BRCA1-224ENST00000497488 UGT2B17O75795 530 aa5.11□□□□□ -1.59
BRCA1-224ENST00000497488 BRI3O95415 125 aa5.11□□□□□ -1.59
BRCA1-224ENST00000497488 NGFP01138 241 aa5.11□□□□□ -1.59
BRCA1-224ENST00000497488 EDN1P05305 212 aa5.11□□□□□ -1.59
BRCA1-224ENST00000497488 PRSS2P07478 247 aa5.11□□□□□ -1.59
BRCA1-224ENST00000497488 TCN1P20061 433 aaPredicted RBP5.11□□□□□ -1.59
BRCA1-224ENST00000497488 PROZP22891 400 aa5.11□□□□□ -1.59
BRCA1-224ENST00000497488 CSKP41240 450 aa5.11□□□□□ -1.59
BRCA1-224ENST00000497488 DAP3P51398 398 aaKnown RBP5.11□□□□□ -1.59
BRCA1-224ENST00000497488 OR2B6P58173 313 aa5.11□□□□□ -1.59
BRCA1-224ENST00000497488 UBE2G2P60604 165 aa5.11□□□□□ -1.59
BRCA1-224ENST00000497488 RPS14P62263 151 aaKnown RBP5.11□□□□□ -1.59
BRCA1-224ENST00000497488 TUBA1BP68363 451 aa5.11□□□□□ -1.59
BRCA1-224ENST00000497488 ST3GAL3Q11203 375 aa5.11□□□□□ -1.59
BRCA1-224ENST00000497488 SLAMF1Q13291 335 aa5.11□□□□□ -1.59
BRCA1-224ENST00000497488 ITGB3BPQ13352 177 aaPredicted RBP5.11□□□□□ -1.59
BRCA1-224ENST00000497488 DGCR6Q14129 220 aa5.11□□□□□ -1.59
BRCA1-224ENST00000497488 SERTAD2Q14140 314 aa5.11□□□□□ -1.59
BRCA1-224ENST00000497488 ZNF672Q499Z4 452 aaPredicted RBP5.11□□□□□ -1.59
BRCA1-224ENST00000497488 TECRLQ5HYJ1 363 aa5.11□□□□□ -1.59
BRCA1-224ENST00000497488 SAMD4BQ5PRF9 694 aaKnown RBP5.11□□□□□ -1.59
BRCA1-224ENST00000497488 ZNF836Q6ZNA1 936 aa5.11□□□□□ -1.59
BRCA1-224ENST00000497488 TIPARPQ7Z3E1 657 aaKnown RBP5.11□□□□□ -1.59
BRCA1-224ENST00000497488 APOBEC3FQ8IUX4 373 aaKnown RBP5.11□□□□□ -1.59
BRCA1-224ENST00000497488 ZNF781Q8N8C0 355 aa5.11□□□□□ -1.59
BRCA1-224ENST00000497488 OR2T11Q8NH01 316 aa5.11□□□□□ -1.59
BRCA1-224ENST00000497488 ZPLD1Q8TCW7 415 aa5.11□□□□□ -1.59
BRCA1-224ENST00000497488 CAPSLQ8WWF8 208 aa5.11□□□□□ -1.59
BRCA1-224ENST00000497488 ISOC2Q96AB3 205 aa5.11□□□□□ -1.59
BRCA1-224ENST00000497488 ST6GAL2Q96JF0 529 aa5.11□□□□□ -1.59
BRCA1-224ENST00000497488 MED10Q9BTT4 135 aa5.11□□□□□ -1.59
BRCA1-224ENST00000497488 PITPNM3Q9BZ71 974 aa5.11□□□□□ -1.59
BRCA1-224ENST00000497488 ACTR3CQ9C0K3 210 aaPredicted RBP5.11□□□□□ -1.59
BRCA1-224ENST00000497488 KIR3DX1Q9H7L2 352 aa5.11□□□□□ -1.59
BRCA1-224ENST00000497488 NT5DC2Q9H857 520 aa5.11□□□□□ -1.59
BRCA1-224ENST00000497488 NTN4Q9HB63 628 aa5.11□□□□□ -1.59
BRCA1-224ENST00000497488 ADGRL4Q9HBW9 690 aa5.11□□□□□ -1.59
BRCA1-224ENST00000497488 FGF20Q9NP95 211 aaPredicted RBP5.11□□□□□ -1.59
BRCA1-224ENST00000497488 ABCD2Q9UBJ2 740 aa5.11□□□□□ -1.59
BRCA1-224ENST00000497488 CIDEBQ9UHD4 219 aa5.11□□□□□ -1.59
BRCA1-224ENST00000497488 MRM2Q9UI43 246 aaKnown RBP5.11□□□□□ -1.59
BRCA1-224ENST00000497488 KCNG2Q9UJ96 466 aa5.11□□□□□ -1.59
BRCA1-224ENST00000497488 PSMD13Q9UNM6 376 aa5.11□□□□□ -1.59
BRCA1-224ENST00000497488 KCNIP3Q9Y2W7 256 aa5.11□□□□□ -1.59
BRCA1-224ENST00000497488 PUS1Q9Y606 427 aaKnown RBP eCLIP5.11□□□□□ -1.59
BRCA1-224ENST00000497488 A0A087X1B8 175 aa5.1□□□□□ -1.59
BRCA1-224ENST00000497488 A0A1W2PS18 150 aa5.1□□□□□ -1.59
BRCA1-224ENST00000497488 MSGN1A6NI15 193 aa5.1□□□□□ -1.59
BRCA1-224ENST00000497488 IDSB3KWA1 339 aa5.1□□□□□ -1.59
BRCA1-224ENST00000497488 RNASEK-C17orf49H0YIS7 233 aa5.1□□□□□ -1.59
BRCA1-224ENST00000497488 GOSR2O14653 212 aa5.1□□□□□ -1.59
BRCA1-224ENST00000497488 EIF4E2O60573 245 aaKnown RBP5.1□□□□□ -1.59
BRCA1-224ENST00000497488 SLC19A2O60779 497 aa5.1□□□□□ -1.59
BRCA1-224ENST00000497488 LYPD3O95274 346 aa5.1□□□□□ -1.59
BRCA1-224ENST00000497488 C4AP0C0L4 1744 aa5.1□□□□□ -1.59
BRCA1-224ENST00000497488 UBTFL1P0CB47 393 aaPredicted RBP5.1□□□□□ -1.59
BRCA1-224ENST00000497488 RNH1P13489 461 aaKnown RBP5.1□□□□□ -1.59
BRCA1-224ENST00000497488 NPR2P20594 1047 aa5.1□□□□□ -1.59
BRCA1-224ENST00000497488 COX5AP20674 150 aa5.1□□□□□ -1.59
BRCA1-224ENST00000497488 CALML3P27482 149 aa5.1□□□□□ -1.59
BRCA1-224ENST00000497488 FGF9P31371 208 aaPredicted RBP5.1□□□□□ -1.59
BRCA1-224ENST00000497488 GPR1P46091 355 aa5.1□□□□□ -1.59
BRCA1-224ENST00000497488 KPNA2P52292 529 aaKnown RBP5.1□□□□□ -1.59
BRCA1-224ENST00000497488 CRYBA2P53672 197 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms