RNA–Protein interactions for RNA: ENST00000496711.5

GARNL3-220, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 1 (best)

Gene GARNL3, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-220ENST00000496711 CDX2Q99626 313 aaPredicted RBP11.82□□□□□ -0.52
GARNL3-220ENST00000496711 WACQ9BTA9 647 aa11.82□□□□□ -0.52
GARNL3-220ENST00000496711 HDHD2Q9H0R4 259 aa11.82□□□□□ -0.52
GARNL3-220ENST00000496711 SYT4Q9H2B2 425 aa11.82□□□□□ -0.52
GARNL3-220ENST00000496711 MOV10Q9HCE1 1003 aaKnown RBP11.82□□□□□ -0.52
GARNL3-220ENST00000496711 ASCC3Q8N3C0 2202 aaKnown RBP11.81□□□□□ -0.52
GARNL3-220ENST00000496711 A0A0B4J293 547 aa11.81□□□□□ -0.52
GARNL3-220ENST00000496711 LY6G6EA0A0G2JKS1 128 aa11.81□□□□□ -0.52
GARNL3-220ENST00000496711 A0A1B0GTQ1 180 aa11.81□□□□□ -0.52
GARNL3-220ENST00000496711 FAM240BA0A1B0GVZ2 78 aa11.81□□□□□ -0.52
GARNL3-220ENST00000496711 TMEM221A6NGB7 291 aa11.81□□□□□ -0.52
GARNL3-220ENST00000496711 TVP23AA6NH52 213 aa11.81□□□□□ -0.52
GARNL3-220ENST00000496711 A8MVM7 634 aa11.81□□□□□ -0.52
GARNL3-220ENST00000496711 C11orf98E9PRG8 122 aa11.81□□□□□ -0.52
GARNL3-220ENST00000496711 XKRYO14609 159 aa11.81□□□□□ -0.52
GARNL3-220ENST00000496711 FZD7O75084 574 aa11.81□□□□□ -0.52
GARNL3-220ENST00000496711 NPIPB7O75200 414 aa11.81□□□□□ -0.52
GARNL3-220ENST00000496711 SCRG1O75711 98 aa11.81□□□□□ -0.52
GARNL3-220ENST00000496711 TIAF1O95411 115 aa11.81□□□□□ -0.52
GARNL3-220ENST00000496711 FAM157BP0CG42 384 aa11.81□□□□□ -0.52
GARNL3-220ENST00000496711 PRKCAP17252 672 aa11.81□□□□□ -0.52
GARNL3-220ENST00000496711 CEP78Q5JTW2 689 aa11.81□□□□□ -0.52
GARNL3-220ENST00000496711 SYT9Q86SS6 491 aa11.81□□□□□ -0.52
GARNL3-220ENST00000496711 OR6V1Q8N148 313 aa11.81□□□□□ -0.52
GARNL3-220ENST00000496711 YIPF7Q8N8F6 280 aa11.81□□□□□ -0.52
GARNL3-220ENST00000496711 SLC38A9Q8NBW4 561 aa11.81□□□□□ -0.52
GARNL3-220ENST00000496711 APCDD1LQ8NCL9 501 aa11.81□□□□□ -0.52
GARNL3-220ENST00000496711 OR4D9Q8NGE8 314 aa11.81□□□□□ -0.52
GARNL3-220ENST00000496711 OR5H6Q8NGV6 325 aa11.81□□□□□ -0.52
GARNL3-220ENST00000496711 OR6N2Q8NGY6 317 aa11.81□□□□□ -0.52
GARNL3-220ENST00000496711 METTL21AQ8WXB1 218 aa11.81□□□□□ -0.52
GARNL3-220ENST00000496711 TRIM63Q969Q1 353 aa11.81□□□□□ -0.52
GARNL3-220ENST00000496711 RNF166Q96A37 237 aaPredicted RBP11.81□□□□□ -0.52
GARNL3-220ENST00000496711 SLC25A36Q96CQ1 311 aa11.81□□□□□ -0.52
GARNL3-220ENST00000496711 DNAJA3Q96EY1 480 aa11.81□□□□□ -0.52
GARNL3-220ENST00000496711 KLHL15Q96M94 604 aa11.81□□□□□ -0.52
GARNL3-220ENST00000496711 WDR76Q9H967 626 aa11.81□□□□□ -0.52
GARNL3-220ENST00000496711 NOX4Q9NPH5 578 aa11.81□□□□□ -0.52
GARNL3-220ENST00000496711 TAS2R5Q9NYW4 299 aa11.81□□□□□ -0.52
GARNL3-220ENST00000496711 MRM2Q9UI43 246 aaKnown RBP11.81□□□□□ -0.52
GARNL3-220ENST00000496711 POU2F3Q9UKI9 436 aa11.81□□□□□ -0.52
GARNL3-220ENST00000496711 RARRES3Q9UL19 164 aa11.81□□□□□ -0.52
GARNL3-220ENST00000496711 U3KQA8 63 aa11.81□□□□□ -0.52
GARNL3-220ENST00000496711 CCDC163A0A0D9SF12 145 aa11.8□□□□□ -0.52
GARNL3-220ENST00000496711 A0A1W2PQM1 296 aa11.8□□□□□ -0.52
GARNL3-220ENST00000496711 ADAM10O14672 748 aa11.8□□□□□ -0.52
GARNL3-220ENST00000496711 PDCD5O14737 125 aa11.8□□□□□ -0.52
GARNL3-220ENST00000496711 ARHGEF9O43307 516 aa11.8□□□□□ -0.52
GARNL3-220ENST00000496711 SIGLEC6O43699 453 aa11.8□□□□□ -0.52
GARNL3-220ENST00000496711 ALOX12BO75342 701 aa11.8□□□□□ -0.52
GARNL3-220ENST00000496711 TRIM3O75382 744 aaPredicted RBP11.8□□□□□ -0.52
GARNL3-220ENST00000496711 UPK3AO75631 287 aa11.8□□□□□ -0.52
GARNL3-220ENST00000496711 ZFPL1O95159 310 aa11.8□□□□□ -0.52
GARNL3-220ENST00000496711 WISP1O95388 367 aa11.8□□□□□ -0.52
GARNL3-220ENST00000496711 ABHD16AO95870 558 aa11.8□□□□□ -0.52
GARNL3-220ENST00000496711 SNRPBP14678 240 aaKnown RBP11.8□□□□□ -0.52
GARNL3-220ENST00000496711 CLDN20P56880 219 aa11.8□□□□□ -0.52
GARNL3-220ENST00000496711 CCL7P80098 99 aa11.8□□□□□ -0.52
GARNL3-220ENST00000496711 COL28A1Q2UY09 1125 aa11.8□□□□□ -0.52
GARNL3-220ENST00000496711 TBRG1Q3YBR2 411 aa11.8□□□□□ -0.52
GARNL3-220ENST00000496711 C1orf140Q5VVS0 124 aa11.8□□□□□ -0.52
GARNL3-220ENST00000496711 PMS2CLQ68D20 193 aa11.8□□□□□ -0.52
GARNL3-220ENST00000496711 C5orf46Q6UWT4 87 aa11.8□□□□□ -0.52
GARNL3-220ENST00000496711 ADGRG3Q86Y34 549 aa11.8□□□□□ -0.52
GARNL3-220ENST00000496711 PM20D2Q8IYS1 436 aa11.8□□□□□ -0.52
GARNL3-220ENST00000496711 NFAM1Q8NET5 270 aaPredicted RBP11.8□□□□□ -0.52
GARNL3-220ENST00000496711 SAP25Q8TEE9 199 aa11.8□□□□□ -0.52
GARNL3-220ENST00000496711 RGP1Q92546 391 aaPredicted RBP11.8□□□□□ -0.52
GARNL3-220ENST00000496711 FAM210AQ96ND0 272 aa11.8□□□□□ -0.52
GARNL3-220ENST00000496711 INTS14Q96SY0 518 aa11.8□□□□□ -0.52
GARNL3-220ENST00000496711 THAP7Q9BT49 309 aaPredicted RBP11.8□□□□□ -0.52
GARNL3-220ENST00000496711 NEK6Q9HC98 313 aa11.8□□□□□ -0.52
GARNL3-220ENST00000496711 BRD7Q9NPI1 651 aa11.8□□□□□ -0.52
GARNL3-220ENST00000496711 SUSD2Q9UGT4 822 aa11.8□□□□□ -0.52
GARNL3-220ENST00000496711 LAMP5Q9UJQ1 280 aa11.8□□□□□ -0.52
GARNL3-220ENST00000496711 AK6Q9Y3D8 172 aaKnown RBP11.8□□□□□ -0.52
GARNL3-220ENST00000496711 TMEM14AQ9Y6G1 99 aa11.8□□□□□ -0.52
GARNL3-220ENST00000496711 IGHV5-10-1A0A0J9YXX1 117 aa11.8□□□□□ -0.52
GARNL3-220ENST00000496711 ACOD1A6NK06 481 aa11.8□□□□□ -0.52
GARNL3-220ENST00000496711 AGRPO00253 132 aa11.8□□□□□ -0.52
GARNL3-220ENST00000496711 PHYHO14832 338 aa11.8□□□□□ -0.52
GARNL3-220ENST00000496711 ITGA10O75578 1167 aa11.8□□□□□ -0.52
GARNL3-220ENST00000496711 RPP14O95059 124 aaKnown RBP11.8□□□□□ -0.52
GARNL3-220ENST00000496711 AKR7A3O95154 331 aa11.8□□□□□ -0.52
GARNL3-220ENST00000496711 AHSA1O95433 338 aa11.8□□□□□ -0.52
GARNL3-220ENST00000496711 PLGP00747 810 aaPredicted RBP11.8□□□□□ -0.52
GARNL3-220ENST00000496711 SRMP19623 302 aa11.8□□□□□ -0.52
GARNL3-220ENST00000496711 NR4A2P43354 598 aa11.8□□□□□ -0.52
GARNL3-220ENST00000496711 NKX2-5P52952 324 aaPredicted RBP11.8□□□□□ -0.52
GARNL3-220ENST00000496711 RPL27P61353 136 aaKnown RBP11.8□□□□□ -0.52
GARNL3-220ENST00000496711 ALKBH1Q13686 389 aaKnown RBP11.8□□□□□ -0.52
GARNL3-220ENST00000496711 HACD4Q5VWC8 232 aa11.8□□□□□ -0.52
GARNL3-220ENST00000496711 PWWP2BQ6NUJ5 590 aa11.8□□□□□ -0.52
GARNL3-220ENST00000496711 BAIAP2L2Q6UXY1 529 aa11.8□□□□□ -0.52
GARNL3-220ENST00000496711 PRR23CQ6ZRP0 262 aa11.8□□□□□ -0.52
GARNL3-220ENST00000496711 NCCRP1Q6ZVX7 275 aaPredicted RBP11.8□□□□□ -0.52
GARNL3-220ENST00000496711 GLCCI1Q86VQ1 547 aa11.8□□□□□ -0.52
GARNL3-220ENST00000496711 DTX3Q8N9I9 347 aa11.8□□□□□ -0.52
GARNL3-220ENST00000496711 NUBPLQ8TB37 319 aa11.8□□□□□ -0.52
GARNL3-220ENST00000496711 ZNF519Q8TB69 540 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms