RNA–Protein interactions for RNA: ENST00000496189.1

SF3A1-209, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 693 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-209ENST00000496189 SELENOPP49908 381 aa14.42□□□□□ -0.1
SF3A1-209ENST00000496189 SH3BGRP55822 239 aaPredicted RBP14.42□□□□□ -0.1
SF3A1-209ENST00000496189 VLDLRP98155 873 aa14.42□□□□□ -0.1
SF3A1-209ENST00000496189 ZNF74Q16587 644 aa14.42□□□□□ -0.1
SF3A1-209ENST00000496189 ZNF730Q6ZMV8 503 aa14.42□□□□□ -0.1
SF3A1-209ENST00000496189 PXKQ7Z7A4 578 aa14.42□□□□□ -0.1
SF3A1-209ENST00000496189 ZDHHC21Q8IVQ6 265 aa14.42□□□□□ -0.1
SF3A1-209ENST00000496189 AQP12AQ8IXF9 295 aa14.42□□□□□ -0.1
SF3A1-209ENST00000496189 CDK20Q8IZL9 346 aa14.42□□□□□ -0.1
SF3A1-209ENST00000496189 ANKK1Q8NFD2 765 aa14.42□□□□□ -0.1
SF3A1-209ENST00000496189 TMEM255BQ8WV15 326 aa14.42□□□□□ -0.1
SF3A1-209ENST00000496189 ACOT11Q8WXI4 607 aaPredicted RBP14.42□□□□□ -0.1
SF3A1-209ENST00000496189 NRGNQ92686 78 aa14.42□□□□□ -0.1
SF3A1-209ENST00000496189 SEPHS2Q99611 448 aa14.42□□□□□ -0.1
SF3A1-209ENST00000496189 LINC00470Q9BZP3 86 aa14.42□□□□□ -0.1
SF3A1-209ENST00000496189 PLEKHF2Q9H8W4 249 aa14.42□□□□□ -0.1
SF3A1-209ENST00000496189 UBTD1Q9HAC8 227 aa14.42□□□□□ -0.1
SF3A1-209ENST00000496189 RHCGQ9UBD6 479 aa14.42□□□□□ -0.1
SF3A1-209ENST00000496189 LRBAP50851 2863 aa14.42□□□□□ -0.1
SF3A1-209ENST00000496189 TACC2O95359 2948 aa14.42□□□□□ -0.1
SF3A1-209ENST00000496189 A0A1W2PRQ8 180 aa14.41□□□□□ -0.1
SF3A1-209ENST00000496189 C11orf98E9PRG8 122 aa14.41□□□□□ -0.1
SF3A1-209ENST00000496189 PLPP3O14495 311 aa14.41□□□□□ -0.1
SF3A1-209ENST00000496189 ACOT8O14734 319 aa14.41□□□□□ -0.1
SF3A1-209ENST00000496189 FFAR1O14842 300 aa14.41□□□□□ -0.1
SF3A1-209ENST00000496189 KLF4O43474 513 aa14.41□□□□□ -0.1
SF3A1-209ENST00000496189 SEMG1P04279 462 aa14.41□□□□□ -0.1
SF3A1-209ENST00000496189 ITGA5P08648 1049 aa14.41□□□□□ -0.1
SF3A1-209ENST00000496189 PAX7P23759 505 aa14.41□□□□□ -0.1
SF3A1-209ENST00000496189 DGCR6Q14129 220 aa14.41□□□□□ -0.1
SF3A1-209ENST00000496189 GABRA6Q16445 453 aa14.41□□□□□ -0.1
SF3A1-209ENST00000496189 FGD3Q5JSP0 725 aa14.41□□□□□ -0.1
SF3A1-209ENST00000496189 TMEM108Q6UXF1 575 aa14.41□□□□□ -0.1
SF3A1-209ENST00000496189 ZNF704Q6ZNC4 412 aaPredicted RBP14.41□□□□□ -0.1
SF3A1-209ENST00000496189 C20orf204Q6ZNR8 217 aa14.41□□□□□ -0.1
SF3A1-209ENST00000496189 C22orf34Q6ZV56 151 aa14.41□□□□□ -0.1
SF3A1-209ENST00000496189 PIWIL3Q7Z3Z3 882 aaKnown RBP14.41□□□□□ -0.1
SF3A1-209ENST00000496189 HDDC2Q7Z4H3 204 aa14.41□□□□□ -0.1
SF3A1-209ENST00000496189 LSRQ86X29 649 aaPredicted RBP14.41□□□□□ -0.1
SF3A1-209ENST00000496189 DEPDC4Q8N2C3 294 aa14.41□□□□□ -0.1
SF3A1-209ENST00000496189 OR52N5Q8NH56 324 aa14.41□□□□□ -0.1
SF3A1-209ENST00000496189 SGTBQ96EQ0 304 aa14.41□□□□□ -0.1
SF3A1-209ENST00000496189 ADAD1Q96M93 576 aaKnown RBP14.41□□□□□ -0.1
SF3A1-209ENST00000496189 ALKBH3Q96Q83 286 aaPredicted RBP14.41□□□□□ -0.1
SF3A1-209ENST00000496189 MOV10Q9HCE1 1003 aaKnown RBP14.41□□□□□ -0.1
SF3A1-209ENST00000496189 KRCC1Q9NPI7 259 aaPredicted RBP14.41□□□□□ -0.1
SF3A1-209ENST00000496189 B3GAT1Q9P2W7 334 aa14.41□□□□□ -0.1
SF3A1-209ENST00000496189 POMPQ9Y244 141 aa14.41□□□□□ -0.1
SF3A1-209ENST00000496189 PLEKHA6Q9Y2H5 1048 aa14.41□□□□□ -0.1
SF3A1-209ENST00000496189 RNF115Q9Y4L5 304 aa14.41□□□□□ -0.1
SF3A1-209ENST00000496189 A0A1W2PRG6 482 aa14.4□□□□□ -0.1
SF3A1-209ENST00000496189 TCRBV5S2A0A599 114 aa14.4□□□□□ -0.1
SF3A1-209ENST00000496189 LRRN3E7EW58 273 aa14.4□□□□□ -0.1
SF3A1-209ENST00000496189 MS4A18H0YCH9 400 aa14.4□□□□□ -0.1
SF3A1-209ENST00000496189 BLOC1S5-TXNDC5H3BN57 136 aa14.4□□□□□ -0.1
SF3A1-209ENST00000496189 CLOCKO15516 846 aa14.4□□□□□ -0.1
SF3A1-209ENST00000496189 CIB2O75838 187 aa14.4□□□□□ -0.1
SF3A1-209ENST00000496189 PRSS23O95084 383 aa14.4□□□□□ -0.1
SF3A1-209ENST00000496189 UGT2B15P54855 530 aa14.4□□□□□ -0.1
SF3A1-209ENST00000496189 PRPS1P60891 318 aa14.4□□□□□ -0.1
SF3A1-209ENST00000496189 UBE2NP61088 152 aaKnown RBP14.4□□□□□ -0.1
SF3A1-209ENST00000496189 ROR2Q01974 943 aaKnown RBP14.4□□□□□ -0.1
SF3A1-209ENST00000496189 LTBQ06643 244 aa14.4□□□□□ -0.1
SF3A1-209ENST00000496189 MS4A18Q3C1V0 323 aa14.4□□□□□ -0.1
SF3A1-209ENST00000496189 MBOAT2Q6ZWT7 520 aa14.4□□□□□ -0.1
SF3A1-209ENST00000496189 SPATA24Q86W54 205 aa14.4□□□□□ -0.1
SF3A1-209ENST00000496189 OR6N1Q8NGY5 312 aa14.4□□□□□ -0.1
SF3A1-209ENST00000496189 MUS81Q96NY9 551 aa14.4□□□□□ -0.1
SF3A1-209ENST00000496189 OBP2BQ9NPH6 170 aa14.4□□□□□ -0.1
SF3A1-209ENST00000496189 MEPEQ9NQ76 525 aaPredicted RBP14.4□□□□□ -0.1
SF3A1-209ENST00000496189 CCM2LQ9NUG4 571 aaPredicted RBP14.4□□□□□ -0.1
SF3A1-209ENST00000496189 ZKSCAN7Q9P0L1 754 aaPredicted RBP14.4□□□□□ -0.1
SF3A1-209ENST00000496189 SLC7A8Q9UHI5 535 aa14.4□□□□□ -0.1
SF3A1-209ENST00000496189 TMCC3Q9ULS5 477 aa14.4□□□□□ -0.1
SF3A1-209ENST00000496189 TMEM5Q9Y2B1 443 aa14.4□□□□□ -0.1
SF3A1-209ENST00000496189 FREM1Q5H8C1 2179 aa14.4□□□□□ -0.1
SF3A1-209ENST00000496189 CREBBPQ92793 2442 aa14.4□□□□□ -0.1
SF3A1-209ENST00000496189 DHRS12A0PJE2 317 aa14.39□□□□□ -0.11
SF3A1-209ENST00000496189 MCIDASD6RGH6 385 aa14.39□□□□□ -0.11
SF3A1-209ENST00000496189 PDLIM1O00151 329 aa14.39□□□□□ -0.11
SF3A1-209ENST00000496189 SIAH2O43255 324 aa14.39□□□□□ -0.11
SF3A1-209ENST00000496189 TRAF3IP2O43734 574 aaPredicted RBP14.39□□□□□ -0.11
SF3A1-209ENST00000496189 KRT36O76013 467 aa14.39□□□□□ -0.11
SF3A1-209ENST00000496189 OR7A10O76100 309 aa14.39□□□□□ -0.11
SF3A1-209ENST00000496189 DIRAS1O95057 198 aa14.39□□□□□ -0.11
SF3A1-209ENST00000496189 GADD45GO95257 159 aa14.39□□□□□ -0.11
SF3A1-209ENST00000496189 RAP2AP10114 183 aa14.39□□□□□ -0.11
SF3A1-209ENST00000496189 IFI30P13284 250 aa14.39□□□□□ -0.11
SF3A1-209ENST00000496189 FUT1P19526 365 aa14.39□□□□□ -0.11
SF3A1-209ENST00000496189 ART1P52961 327 aa14.39□□□□□ -0.11
SF3A1-209ENST00000496189 IST1P53990 364 aa14.39□□□□□ -0.11
SF3A1-209ENST00000496189 SPIBQ01892 262 aa14.39□□□□□ -0.11
SF3A1-209ENST00000496189 ZP4Q12836 540 aa14.39□□□□□ -0.11
SF3A1-209ENST00000496189 TAF11Q15544 211 aa14.39□□□□□ -0.11
SF3A1-209ENST00000496189 ACKR1Q16570 336 aa14.39□□□□□ -0.11
SF3A1-209ENST00000496189 NCMAPQ5T1S8 102 aa14.39□□□□□ -0.11
SF3A1-209ENST00000496189 CARD17Q5XLA6 110 aa14.39□□□□□ -0.11
SF3A1-209ENST00000496189 TSEN54Q7Z6J9 526 aaKnown RBP14.39□□□□□ -0.11
SF3A1-209ENST00000496189 PFN4Q8NHR9 129 aa14.39□□□□□ -0.11
SF3A1-209ENST00000496189 PIGTQ969N2 578 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms