RNA–Protein interactions for RNA: ENST00000495899.1

MRPL55-233, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 2

Gene MRPL55, Length 790 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-233ENST00000495899 CD300AQ9UGN4 299 aa10.87□□□□□ -0.67
MRPL55-233ENST00000495899 A4GNTQ9UNA3 340 aa10.87□□□□□ -0.67
MRPL55-233ENST00000495899 SAMD4AQ9UPU9 718 aaKnown RBP10.87□□□□□ -0.67
MRPL55-233ENST00000495899 MED31Q9Y3C7 131 aa10.87□□□□□ -0.67
MRPL55-233ENST00000495899 MYO9AB2RTY4 2548 aa10.87□□□□□ -0.67
MRPL55-233ENST00000495899 CREBBPQ92793 2442 aa10.86□□□□□ -0.67
MRPL55-233ENST00000495899 LRRN3E7EW58 273 aa10.86□□□□□ -0.67
MRPL55-233ENST00000495899 UPK3AO75631 287 aa10.86□□□□□ -0.67
MRPL55-233ENST00000495899 ATE1O95260 518 aa10.86□□□□□ -0.67
MRPL55-233ENST00000495899 ADORA3P0DMS8 318 aa10.86□□□□□ -0.67
MRPL55-233ENST00000495899 NCK1P16333 377 aa10.86□□□□□ -0.67
MRPL55-233ENST00000495899 AHCYP23526 432 aa10.86□□□□□ -0.67
MRPL55-233ENST00000495899 FOXG1P55316 489 aaPredicted RBP10.86□□□□□ -0.67
MRPL55-233ENST00000495899 SH3BGRP55822 239 aaPredicted RBP10.86□□□□□ -0.67
MRPL55-233ENST00000495899 MXRA7P84157 204 aa10.86□□□□□ -0.67
MRPL55-233ENST00000495899 SLC25A3Q00325 362 aa10.86□□□□□ -0.67
MRPL55-233ENST00000495899 TESK1Q15569 626 aa10.86□□□□□ -0.67
MRPL55-233ENST00000495899 ACKR1Q16570 336 aa10.86□□□□□ -0.67
MRPL55-233ENST00000495899 ALKBH2Q6NS38 261 aa10.86□□□□□ -0.67
MRPL55-233ENST00000495899 ADAM5Q6NVV9 412 aa10.86□□□□□ -0.67
MRPL55-233ENST00000495899 ZNF704Q6ZNC4 412 aaPredicted RBP10.86□□□□□ -0.67
MRPL55-233ENST00000495899 C20orf204Q6ZNR8 217 aa10.86□□□□□ -0.67
MRPL55-233ENST00000495899 CYP4Z1Q86W10 505 aa10.86□□□□□ -0.67
MRPL55-233ENST00000495899 RNF113BQ8IZP6 322 aaKnown RBP10.86□□□□□ -0.67
MRPL55-233ENST00000495899 OFCC1Q8IZS5 231 aa10.86□□□□□ -0.67
MRPL55-233ENST00000495899 TMEM123Q8N131 208 aa10.86□□□□□ -0.67
MRPL55-233ENST00000495899 RNF148Q8N7C7 305 aa10.86□□□□□ -0.67
MRPL55-233ENST00000495899 TMEM255BQ8WV15 326 aa10.86□□□□□ -0.67
MRPL55-233ENST00000495899 RADILQ96JH8 1075 aa10.86□□□□□ -0.67
MRPL55-233ENST00000495899 ADAD1Q96M93 576 aaKnown RBP10.86□□□□□ -0.67
MRPL55-233ENST00000495899 OR2M2Q96R28 347 aa10.86□□□□□ -0.67
MRPL55-233ENST00000495899 FOXC2Q99958 501 aa10.86□□□□□ -0.67
MRPL55-233ENST00000495899 FNDC11Q9BVV2 318 aa10.86□□□□□ -0.67
MRPL55-233ENST00000495899 OBP2BQ9NPH6 170 aa10.86□□□□□ -0.67
MRPL55-233ENST00000495899 MAGEL2Q9UJ55 1249 aa10.86□□□□□ -0.67
MRPL55-233ENST00000495899 ITGB1BP2Q9UKP3 347 aa10.86□□□□□ -0.67
MRPL55-233ENST00000495899 AMDHD2Q9Y303 409 aa10.86□□□□□ -0.67
MRPL55-233ENST00000495899 MAGED1Q9Y5V3 778 aaPredicted RBP10.86□□□□□ -0.67
MRPL55-233ENST00000495899 SLC25A15Q9Y619 301 aa10.86□□□□□ -0.67
MRPL55-233ENST00000495899 ZNF726A6NNF4 738 aa10.85□□□□□ -0.67
MRPL55-233ENST00000495899 B2RBV5 119 aa10.85□□□□□ -0.67
MRPL55-233ENST00000495899 KPNA4O00629 521 aaPredicted RBP10.85□□□□□ -0.67
MRPL55-233ENST00000495899 FFAR1O14842 300 aa10.85□□□□□ -0.67
MRPL55-233ENST00000495899 CD3EP07766 207 aa10.85□□□□□ -0.67
MRPL55-233ENST00000495899 HLA-DOBP13765 273 aa10.85□□□□□ -0.67
MRPL55-233ENST00000495899 FUT1P19526 365 aa10.85□□□□□ -0.67
MRPL55-233ENST00000495899 PTNP21246 168 aa10.85□□□□□ -0.67
MRPL55-233ENST00000495899 CALB2P22676 271 aa10.85□□□□□ -0.67
MRPL55-233ENST00000495899 HOXC12P31275 282 aa10.85□□□□□ -0.67
MRPL55-233ENST00000495899 PRPS1P60891 318 aa10.85□□□□□ -0.67
MRPL55-233ENST00000495899 POU3F1Q03052 451 aaPredicted RBP10.85□□□□□ -0.67
MRPL55-233ENST00000495899 TRAM2Q15035 370 aa10.85□□□□□ -0.67
MRPL55-233ENST00000495899 HMBOX1Q6NT76 420 aa10.85□□□□□ -0.67
MRPL55-233ENST00000495899 ANKRD16Q6P6B7 361 aa10.85□□□□□ -0.67
MRPL55-233ENST00000495899 KLHL17Q6TDP4 642 aa10.85□□□□□ -0.67
MRPL55-233ENST00000495899 TMEM108Q6UXF1 575 aa10.85□□□□□ -0.67
MRPL55-233ENST00000495899 SPNS3Q6ZMD2 512 aa10.85□□□□□ -0.67
MRPL55-233ENST00000495899 C20orf196Q8IYI0 205 aa10.85□□□□□ -0.67
MRPL55-233ENST00000495899 DEFB107AQ8IZN7 70 aa10.85□□□□□ -0.67
MRPL55-233ENST00000495899 ARHGAP24Q8N264 748 aa10.85□□□□□ -0.67
MRPL55-233ENST00000495899 GPR137CQ8N3F9 429 aa10.85□□□□□ -0.67
MRPL55-233ENST00000495899 LRRC17Q8N6Y2 441 aa10.85□□□□□ -0.67
MRPL55-233ENST00000495899 WDR31Q8NA23 367 aa10.85□□□□□ -0.67
MRPL55-233ENST00000495899 MAGEE2Q8TD90 523 aaPredicted RBP10.85□□□□□ -0.67
MRPL55-233ENST00000495899 PIGTQ969N2 578 aa10.85□□□□□ -0.67
MRPL55-233ENST00000495899 SGTBQ96EQ0 304 aa10.85□□□□□ -0.67
MRPL55-233ENST00000495899 ALPK1Q96QP1 1244 aa10.85□□□□□ -0.67
MRPL55-233ENST00000495899 PIP5K1AQ99755 562 aa10.85□□□□□ -0.67
MRPL55-233ENST00000495899 CXXC4Q9H2H0 198 aa10.85□□□□□ -0.67
MRPL55-233ENST00000495899 ANKRD19PQ9H560 264 aa10.85□□□□□ -0.67
MRPL55-233ENST00000495899 MOV10Q9HCE1 1003 aaKnown RBP10.85□□□□□ -0.67
MRPL55-233ENST00000495899 SLC17A5Q9NRA2 495 aa10.85□□□□□ -0.67
MRPL55-233ENST00000495899 CCM2LQ9NUG4 571 aaPredicted RBP10.85□□□□□ -0.67
MRPL55-233ENST00000495899 PLEKHA6Q9Y2H5 1048 aa10.85□□□□□ -0.67
MRPL55-233ENST00000495899 RNF115Q9Y4L5 304 aa10.85□□□□□ -0.67
MRPL55-233ENST00000495899 SNX13Q9Y5W8 968 aa10.85□□□□□ -0.67
MRPL55-233ENST00000495899 ENPP4Q9Y6X5 453 aa10.85□□□□□ -0.67
MRPL55-233ENST00000495899 MPDZO75970 2070 aa10.85□□□□□ -0.67
MRPL55-233ENST00000495899 CSMD1Q96PZ7 3565 aa10.84□□□□□ -0.67
MRPL55-233ENST00000495899 SPG11Q96JI7 2443 aa10.84□□□□□ -0.67
MRPL55-233ENST00000495899 ANKRD17O75179 2603 aaKnown RBP10.84□□□□□ -0.67
MRPL55-233ENST00000495899 SLC35F4A4IF30 521 aa10.84□□□□□ -0.67
MRPL55-233ENST00000495899 DPRXA6NFQ7 191 aa10.84□□□□□ -0.67
MRPL55-233ENST00000495899 RNF13O43567 381 aa10.84□□□□□ -0.67
MRPL55-233ENST00000495899 TMCC2O75069 709 aa10.84□□□□□ -0.67
MRPL55-233ENST00000495899 OR7A10O76100 309 aa10.84□□□□□ -0.67
MRPL55-233ENST00000495899 WNT11O96014 354 aa10.84□□□□□ -0.67
MRPL55-233ENST00000495899 TSPAN19P0C672 248 aa10.84□□□□□ -0.67
MRPL55-233ENST00000495899 UMPSP11172 480 aa10.84□□□□□ -0.67
MRPL55-233ENST00000495899 CD53P19397 219 aa10.84□□□□□ -0.67
MRPL55-233ENST00000495899 TCN1P20061 433 aaPredicted RBP10.84□□□□□ -0.67
MRPL55-233ENST00000495899 PTAFRP25105 342 aa10.84□□□□□ -0.67
MRPL55-233ENST00000495899 ART1P52961 327 aa10.84□□□□□ -0.67
MRPL55-233ENST00000495899 UGT2B15P54855 530 aa10.84□□□□□ -0.67
MRPL55-233ENST00000495899 ROR2Q01974 943 aaKnown RBP10.84□□□□□ -0.67
MRPL55-233ENST00000495899 BSPH1Q075Z2 132 aa10.84□□□□□ -0.67
MRPL55-233ENST00000495899 DEFB113Q30KQ7 82 aa10.84□□□□□ -0.67
MRPL55-233ENST00000495899 ANKDD1AQ495B1 522 aa10.84□□□□□ -0.67
MRPL55-233ENST00000495899 C9orf135Q5VTT2 229 aa10.84□□□□□ -0.67
MRPL55-233ENST00000495899 KLHL24Q6TFL4 600 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms