RNA–Protein interactions for RNA: ENST00000495522.1

CALD1-222, Transcript of caldesmon 1, humanhuman

TSL 5 BASIC

Gene CALD1, Length 2,199 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-222ENST00000495522 PCDHGA9Q9Y5G4 932 aaKnown RBP13.93□□□□□ -0.18
CALD1-222ENST00000495522 COL5A1P20908 1838 aaPredicted RBP13.93□□□□□ -0.18
CALD1-222ENST00000495522 CDC14CA4D256 554 aa13.93□□□□□ -0.18
CALD1-222ENST00000495522 ACOD1A6NK06 481 aa13.93□□□□□ -0.18
CALD1-222ENST00000495522 TO15178 435 aa13.93□□□□□ -0.18
CALD1-222ENST00000495522 NUDT21O43809 227 aaKnown RBP13.93□□□□□ -0.18
CALD1-222ENST00000495522 EIF4E2O60573 245 aaKnown RBP13.93□□□□□ -0.18
CALD1-222ENST00000495522 TSPAN2O60636 221 aa13.93□□□□□ -0.18
CALD1-222ENST00000495522 TMEM127O75204 238 aa13.93□□□□□ -0.18
CALD1-222ENST00000495522 ITGA10O75578 1167 aa13.93□□□□□ -0.18
CALD1-222ENST00000495522 RENP00797 406 aa13.93□□□□□ -0.18
CALD1-222ENST00000495522 CD3GP09693 182 aa13.93□□□□□ -0.18
CALD1-222ENST00000495522 OR8G3PP0DMU2 310 aa13.93□□□□□ -0.18
CALD1-222ENST00000495522 NR0B1P51843 470 aaKnown RBP13.93□□□□□ -0.18
CALD1-222ENST00000495522 EFNA3P52797 238 aa13.93□□□□□ -0.18
CALD1-222ENST00000495522 DGCR2P98153 550 aa13.93□□□□□ -0.18
CALD1-222ENST00000495522 PLCXD2Q0VAA5 305 aa13.93□□□□□ -0.18
CALD1-222ENST00000495522 NSDHLQ15738 373 aa13.93□□□□□ -0.18
CALD1-222ENST00000495522 CDC20BQ86Y33 519 aa13.93□□□□□ -0.18
CALD1-222ENST00000495522 RGP1Q92546 391 aaPredicted RBP13.93□□□□□ -0.18
CALD1-222ENST00000495522 DERL3Q96Q80 235 aa13.93□□□□□ -0.18
CALD1-222ENST00000495522 SLC25A18Q9H1K4 315 aa13.93□□□□□ -0.18
CALD1-222ENST00000495522 NIPAL2Q9H841 368 aa13.93□□□□□ -0.18
CALD1-222ENST00000495522 PLSCR3Q9NRY6 295 aa13.93□□□□□ -0.18
CALD1-222ENST00000495522 COPS7AQ9UBW8 275 aa13.93□□□□□ -0.18
CALD1-222ENST00000495522 MRM2Q9UI43 246 aaKnown RBP13.93□□□□□ -0.18
CALD1-222ENST00000495522 KLHDC2Q9Y2U9 406 aa13.93□□□□□ -0.18
CALD1-222ENST00000495522 NUP210LQ5VU65 1888 aa13.93□□□□□ -0.18
CALD1-222ENST00000495522 EML5Q05BV3 1969 aa13.93□□□□□ -0.18
CALD1-222ENST00000495522 A6NL46 340 aa13.92□□□□□ -0.18
CALD1-222ENST00000495522 ALG1L2C9J202 215 aa13.92□□□□□ -0.18
CALD1-222ENST00000495522 H7C1C5 153 aa13.92□□□□□ -0.18
CALD1-222ENST00000495522 AIPO00170 330 aa13.92□□□□□ -0.18
CALD1-222ENST00000495522 DCTN6O00399 190 aa13.92□□□□□ -0.18
CALD1-222ENST00000495522 CTDSPLO15194 276 aa13.92□□□□□ -0.18
CALD1-222ENST00000495522 GSTZ1O43708 216 aaPredicted RBP13.92□□□□□ -0.18
CALD1-222ENST00000495522 CDC40O60508 579 aaKnown RBP eCLIP13.92□□□□□ -0.18
CALD1-222ENST00000495522 RPP14O95059 124 aaKnown RBP13.92□□□□□ -0.18
CALD1-222ENST00000495522 DHFRP00374 187 aa13.92□□□□□ -0.18
CALD1-222ENST00000495522 C1QBP02746 253 aa13.92□□□□□ -0.18
CALD1-222ENST00000495522 ITPKBP27987 946 aa13.92□□□□□ -0.18
CALD1-222ENST00000495522 LCN6P62502 163 aa13.92□□□□□ -0.18
CALD1-222ENST00000495522 CFHR1Q03591 330 aa13.92□□□□□ -0.18
CALD1-222ENST00000495522 FAPQ12884 760 aa13.92□□□□□ -0.18
CALD1-222ENST00000495522 MAB21L1Q13394 359 aa13.92□□□□□ -0.18
CALD1-222ENST00000495522 EFR3AQ14156 821 aa13.92□□□□□ -0.18
CALD1-222ENST00000495522 VWA2Q5GFL6 755 aa13.92□□□□□ -0.18
CALD1-222ENST00000495522 ARHGAP40Q5TG30 622 aa13.92□□□□□ -0.18
CALD1-222ENST00000495522 ESPNLQ6ZVH7 1005 aa13.92□□□□□ -0.18
CALD1-222ENST00000495522 MARCH3Q86UD3 253 aa13.92□□□□□ -0.18
CALD1-222ENST00000495522 MNTQ99583 582 aa13.92□□□□□ -0.18
CALD1-222ENST00000495522 GFI1Q99684 422 aa13.92□□□□□ -0.18
CALD1-222ENST00000495522 TBL1XR1Q9BZK7 514 aa13.92□□□□□ -0.18
CALD1-222ENST00000495522 WWTR1Q9GZV5 400 aa13.92□□□□□ -0.18
CALD1-222ENST00000495522 SLA2Q9H6Q3 261 aa13.92□□□□□ -0.18
CALD1-222ENST00000495522 NUBP2Q9Y5Y2 271 aa13.92□□□□□ -0.18
CALD1-222ENST00000495522 TRAV36DV7A0A075B6V5 113 aa13.92□□□□□ -0.18
CALD1-222ENST00000495522 A0A1B0GTQ1 180 aa13.92□□□□□ -0.18
CALD1-222ENST00000495522 IFITM5A6NNB3 132 aa13.92□□□□□ -0.18
CALD1-222ENST00000495522 GMFGO60234 142 aa13.92□□□□□ -0.18
CALD1-222ENST00000495522 UPK3AO75631 287 aa13.92□□□□□ -0.18
CALD1-222ENST00000495522 BGLAPP02818 100 aa13.92□□□□□ -0.18
CALD1-222ENST00000495522 FOLR1P15328 257 aa13.92□□□□□ -0.18
CALD1-222ENST00000495522 PGCP20142 388 aa13.92□□□□□ -0.18
CALD1-222ENST00000495522 GZMKP49863 264 aa13.92□□□□□ -0.18
CALD1-222ENST00000495522 ALKBH1Q13686 389 aaKnown RBP13.92□□□□□ -0.18
CALD1-222ENST00000495522 RNASE12Q5GAN4 147 aaKnown RBP13.92□□□□□ -0.18
CALD1-222ENST00000495522 HES5Q5TA89 166 aa13.92□□□□□ -0.18
CALD1-222ENST00000495522 LIPNQ5VXI9 398 aa13.92□□□□□ -0.18
CALD1-222ENST00000495522 SLC29A4Q7RTT9 530 aa13.92□□□□□ -0.18
CALD1-222ENST00000495522 SIAH3Q8IW03 269 aa13.92□□□□□ -0.18
CALD1-222ENST00000495522 OR1N1Q8NGS0 311 aa13.92□□□□□ -0.18
CALD1-222ENST00000495522 SUN5Q8TC36 379 aa13.92□□□□□ -0.18
CALD1-222ENST00000495522 HSD17B8Q92506 261 aa13.92□□□□□ -0.18
CALD1-222ENST00000495522 ORAI1Q96D31 301 aa13.92□□□□□ -0.18
CALD1-222ENST00000495522 OMA1Q96E52 524 aa13.92□□□□□ -0.18
CALD1-222ENST00000495522 C7orf50Q9BRJ6 194 aaKnown RBP13.92□□□□□ -0.18
CALD1-222ENST00000495522 TRAF4Q9BUZ4 470 aaPredicted RBP13.92□□□□□ -0.18
CALD1-222ENST00000495522 FOXQ1Q9C009 403 aa13.92□□□□□ -0.18
CALD1-222ENST00000495522 NUDT15Q9NV35 164 aa13.92□□□□□ -0.18
CALD1-222ENST00000495522 LAMP5Q9UJQ1 280 aa13.92□□□□□ -0.18
CALD1-222ENST00000495522 TVP23AA6NH52 213 aa13.91□□□□□ -0.18
CALD1-222ENST00000495522 NUDT14O95848 222 aa13.91□□□□□ -0.18
CALD1-222ENST00000495522 ABHD16AO95870 558 aa13.91□□□□□ -0.18
CALD1-222ENST00000495522 GP1BBP13224 206 aa13.91□□□□□ -0.18
CALD1-222ENST00000495522 PRKCAP17252 672 aa13.91□□□□□ -0.18
CALD1-222ENST00000495522 MAPK3P27361 379 aaPredicted RBP13.91□□□□□ -0.18
CALD1-222ENST00000495522 TOMM34Q15785 309 aaPredicted RBP13.91□□□□□ -0.18
CALD1-222ENST00000495522 BCL2L15Q5TBC7 163 aa13.91□□□□□ -0.18
CALD1-222ENST00000495522 EEF1A1P5Q5VTE0 462 aa13.91□□□□□ -0.18
CALD1-222ENST00000495522 POMZP3Q6PJE2 187 aa13.91□□□□□ -0.18
CALD1-222ENST00000495522 PRSS58Q8IYP2 241 aa13.91□□□□□ -0.18
CALD1-222ENST00000495522 CMTM4Q8IZR5 234 aa13.91□□□□□ -0.18
CALD1-222ENST00000495522 OR6V1Q8N148 313 aa13.91□□□□□ -0.18
CALD1-222ENST00000495522 ZNF433Q8N7K0 673 aaPredicted RBP13.91□□□□□ -0.18
CALD1-222ENST00000495522 OR5AK2Q8NH90 309 aa13.91□□□□□ -0.18
CALD1-222ENST00000495522 ZFAND1Q8TCF1 268 aa13.91□□□□□ -0.18
CALD1-222ENST00000495522 SMIM4Q8WVI0 70 aa13.91□□□□□ -0.18
CALD1-222ENST00000495522 MAP6Q96JE9 813 aa13.91□□□□□ -0.18
CALD1-222ENST00000495522 SLC41A2Q96JW4 573 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms