RNA–Protein interactions for RNA: ENST00000494993.1

HDDC3-203, Transcript of HD domain containing 3, humanhuman

TSL 2

Gene HDDC3, Length 1,220 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-203ENST00000494993 CHN2P52757 468 aa19.08■□□□□ 0.64
HDDC3-203ENST00000494993 STX1BP61266 288 aa19.08■□□□□ 0.64
HDDC3-203ENST00000494993 DAG1Q14118 895 aa19.08■□□□□ 0.64
HDDC3-203ENST00000494993 MFSD13AQ14CX5 517 aa19.08■□□□□ 0.64
HDDC3-203ENST00000494993 ADRM1Q16186 407 aa19.08■□□□□ 0.64
HDDC3-203ENST00000494993 MS4A18Q3C1V0 323 aa19.08■□□□□ 0.64
HDDC3-203ENST00000494993 LRIF1Q5T3J3 769 aa19.08■□□□□ 0.64
HDDC3-203ENST00000494993 FAM91A1Q658Y4 838 aa19.08■□□□□ 0.64
HDDC3-203ENST00000494993 REEP3Q6NUK4 255 aa19.08■□□□□ 0.64
HDDC3-203ENST00000494993 ULK3Q6PHR2 472 aa19.08■□□□□ 0.64
HDDC3-203ENST00000494993 EPGNQ6UW88 154 aa19.08■□□□□ 0.64
HDDC3-203ENST00000494993 KRT73Q86Y46 540 aa19.08■□□□□ 0.64
HDDC3-203ENST00000494993 UEVLDQ8IX04 471 aa19.08■□□□□ 0.64
HDDC3-203ENST00000494993 C20orf196Q8IYI0 205 aa19.08■□□□□ 0.64
HDDC3-203ENST00000494993 CDK20Q8IZL9 346 aa19.08■□□□□ 0.64
HDDC3-203ENST00000494993 C10orf111Q8N326 155 aa19.08■□□□□ 0.64
HDDC3-203ENST00000494993 ZNF786Q8N393 782 aa19.08■□□□□ 0.64
HDDC3-203ENST00000494993 OR6S1Q8NH40 331 aa19.08■□□□□ 0.64
HDDC3-203ENST00000494993 SLC47A1Q96FL8 570 aa19.08■□□□□ 0.64
HDDC3-203ENST00000494993 SLC41A3Q96GZ6 507 aa19.08■□□□□ 0.64
HDDC3-203ENST00000494993 SPATA5L1Q9BVQ7 753 aa19.08■□□□□ 0.64
HDDC3-203ENST00000494993 B3GNT2Q9NY97 397 aa19.08■□□□□ 0.64
HDDC3-203ENST00000494993 TESQ9UGI8 421 aaKnown RBP19.08■□□□□ 0.64
HDDC3-203ENST00000494993 CORINQ9Y5Q5 1042 aa19.08■□□□□ 0.64
HDDC3-203ENST00000494993 A0A087WUJ7 227 aa19.07■□□□□ 0.64
HDDC3-203ENST00000494993 SH3PXD2BA1X283 911 aa19.07■□□□□ 0.64
HDDC3-203ENST00000494993 TPST1O60507 370 aa19.07■□□□□ 0.64
HDDC3-203ENST00000494993 LILRA1O75019 489 aa19.07■□□□□ 0.64
HDDC3-203ENST00000494993 HPRP00739 348 aa19.07■□□□□ 0.64
HDDC3-203ENST00000494993 HLA-DOBP13765 273 aa19.07■□□□□ 0.64
HDDC3-203ENST00000494993 NQO1P15559 274 aaKnown RBP19.07■□□□□ 0.64
HDDC3-203ENST00000494993 NCALDP61601 193 aa19.07■□□□□ 0.64
HDDC3-203ENST00000494993 CDK6Q00534 326 aa19.07■□□□□ 0.64
HDDC3-203ENST00000494993 SQLEQ14534 574 aa19.07■□□□□ 0.64
HDDC3-203ENST00000494993 GLIPR1L2Q4G1C9 344 aa19.07■□□□□ 0.64
HDDC3-203ENST00000494993 CARD17Q5XLA6 110 aa19.07■□□□□ 0.64
HDDC3-203ENST00000494993 KRT80Q6KB66 452 aa19.07■□□□□ 0.64
HDDC3-203ENST00000494993 FUNDC1Q8IVP5 155 aa19.07■□□□□ 0.64
HDDC3-203ENST00000494993 TLCD1Q96CP7 247 aa19.07■□□□□ 0.64
HDDC3-203ENST00000494993 LRR1Q96L50 414 aa19.07■□□□□ 0.64
HDDC3-203ENST00000494993 EMC6Q9BV81 110 aa19.07■□□□□ 0.64
HDDC3-203ENST00000494993 SLAMF8Q9P0V8 285 aa19.07■□□□□ 0.64
HDDC3-203ENST00000494993 CMAHPQ9Y471 501 aa19.07■□□□□ 0.64
HDDC3-203ENST00000494993 HLA-HP01893 362 aa19.06■□□□□ 0.64
HDDC3-203ENST00000494993 BGLAPP02818 100 aa19.06■□□□□ 0.64
HDDC3-203ENST00000494993 NR4A1P22736 598 aa19.06■□□□□ 0.64
HDDC3-203ENST00000494993 PPIBP23284 216 aaKnown RBP19.06■□□□□ 0.64
HDDC3-203ENST00000494993 APEX1P27695 318 aaKnown RBP19.06■□□□□ 0.64
HDDC3-203ENST00000494993 IL2RGP31785 369 aa19.06■□□□□ 0.64
HDDC3-203ENST00000494993 POU3F1Q03052 451 aaPredicted RBP19.06■□□□□ 0.64
HDDC3-203ENST00000494993 GSG1Q2KHT4 349 aa19.06■□□□□ 0.64
HDDC3-203ENST00000494993 BLOC1S3Q6QNY0 202 aa19.06■□□□□ 0.64
HDDC3-203ENST00000494993 SCAIQ8N9R8 606 aa19.06■□□□□ 0.64
HDDC3-203ENST00000494993 RNF217Q8TC41 542 aa19.06■□□□□ 0.64
HDDC3-203ENST00000494993 UBASH3BQ8TF42 649 aa19.06■□□□□ 0.64
HDDC3-203ENST00000494993 HPS1Q92902 700 aa19.06■□□□□ 0.64
HDDC3-203ENST00000494993 EPYCQ99645 322 aa19.06■□□□□ 0.64
HDDC3-203ENST00000494993 ASPNQ9BXN1 380 aa19.06■□□□□ 0.64
HDDC3-203ENST00000494993 SELENONQ9NZV5 590 aa19.06■□□□□ 0.64
HDDC3-203ENST00000494993 A0A0B4J2E0 115 aa19.05■□□□□ 0.64
HDDC3-203ENST00000494993 A0A1B0GX12 115 aa19.05■□□□□ 0.64
HDDC3-203ENST00000494993 POLR3GO15318 223 aaPredicted RBP19.05■□□□□ 0.64
HDDC3-203ENST00000494993 ADRA2AP08913 450 aa19.05■□□□□ 0.64
HDDC3-203ENST00000494993 CD79AP11912 226 aa19.05■□□□□ 0.64
HDDC3-203ENST00000494993 RGS8P57771 180 aaPredicted RBP19.05■□□□□ 0.64
HDDC3-203ENST00000494993 RIN1Q13671 783 aa19.05■□□□□ 0.64
HDDC3-203ENST00000494993 OR1Q1Q15612 314 aa19.05■□□□□ 0.64
HDDC3-203ENST00000494993 ZNF813Q6ZN06 617 aa19.05■□□□□ 0.64
HDDC3-203ENST00000494993 SPDL1Q96EA4 605 aa19.05■□□□□ 0.64
HDDC3-203ENST00000494993 MS4A3Q96HJ5 214 aa19.05■□□□□ 0.64
HDDC3-203ENST00000494993 ZNF75AQ96N20 296 aa19.05■□□□□ 0.64
HDDC3-203ENST00000494993 SNX18Q96RF0 628 aa19.05■□□□□ 0.64
HDDC3-203ENST00000494993 TPK1Q9H3S4 243 aa19.05■□□□□ 0.64
HDDC3-203ENST00000494993 TMEM27Q9HBJ8 222 aa19.05■□□□□ 0.64
HDDC3-203ENST00000494993 B3GAT2Q9NPZ5 323 aa19.05■□□□□ 0.64
HDDC3-203ENST00000494993 TCF7L2Q9NQB0 619 aa19.05■□□□□ 0.64
HDDC3-203ENST00000494993 MED29Q9NX70 200 aa19.05■□□□□ 0.64
HDDC3-203ENST00000494993 VAPAQ9P0L0 249 aa19.05■□□□□ 0.64
HDDC3-203ENST00000494993 GMEB1Q9Y692 573 aa19.05■□□□□ 0.64
HDDC3-203ENST00000494993 NBEAL1Q6ZS30 2694 aa19.05■□□□□ 0.64
HDDC3-203ENST00000494993 IFNGR1P15260 489 aa19.04■□□□□ 0.64
HDDC3-203ENST00000494993 ZNF14P17017 642 aaPredicted RBP19.04■□□□□ 0.64
HDDC3-203ENST00000494993 PUDPQ08623 228 aa19.04■□□□□ 0.64
HDDC3-203ENST00000494993 SCARB2Q14108 478 aa19.04■□□□□ 0.64
HDDC3-203ENST00000494993 MSMPQ1L6U9 139 aa19.04■□□□□ 0.64
HDDC3-203ENST00000494993 PAGE3Q5JUK9 113 aa19.04■□□□□ 0.64
HDDC3-203ENST00000494993 NHLRC1Q6VVB1 395 aa19.04■□□□□ 0.64
HDDC3-203ENST00000494993 ZNF627Q7L945 461 aa19.04■□□□□ 0.64
HDDC3-203ENST00000494993 LINC01356Q8N9X3 169 aa19.04■□□□□ 0.64
HDDC3-203ENST00000494993 MRPL24Q96A35 216 aaKnown RBP19.04■□□□□ 0.64
HDDC3-203ENST00000494993 TXNDC15Q96J42 360 aa19.04■□□□□ 0.64
HDDC3-203ENST00000494993 MOGAT1Q96PD6 335 aa19.04■□□□□ 0.64
HDDC3-203ENST00000494993 MRPL37Q9BZE1 423 aaKnown RBP19.04■□□□□ 0.64
HDDC3-203ENST00000494993 TMEM38AQ9H6F2 299 aa19.04■□□□□ 0.64
HDDC3-203ENST00000494993 TMBIM4Q9HC24 238 aa19.04■□□□□ 0.64
HDDC3-203ENST00000494993 CCDC167Q9P0B6 97 aa19.04■□□□□ 0.64
HDDC3-203ENST00000494993 POFUT2Q9Y2G5 429 aa19.04■□□□□ 0.64
HDDC3-203ENST00000494993 NOX1Q9Y5S8 564 aa19.04■□□□□ 0.64
HDDC3-203ENST00000494993 TRBV5-3A0A0A0MS03 114 aa19.03■□□□□ 0.64
HDDC3-203ENST00000494993 PRORSD1PA6NEY8 169 aa19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms