RNA–Protein interactions for RNA: ENST00000494795.1

SAMM50-206, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 2

Gene SAMM50, Length 3,248 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-206ENST00000494795 GFI1Q99684 422 aa9.39□□□□□ -0.91
SAMM50-206ENST00000494795 HOXD1Q9GZZ0 328 aa9.39□□□□□ -0.91
SAMM50-206ENST00000494795 C11orf54Q9H0W9 315 aaPredicted RBP9.39□□□□□ -0.91
SAMM50-206ENST00000494795 EXOSC3Q9NQT5 275 aaKnown RBP9.39□□□□□ -0.91
SAMM50-206ENST00000494795 PRMT8Q9NR22 394 aaPredicted RBP9.39□□□□□ -0.91
SAMM50-206ENST00000494795 ENAMQ9NRM1 1142 aa9.39□□□□□ -0.91
SAMM50-206ENST00000494795 RXFP3Q9NSD7 469 aa9.39□□□□□ -0.91
SAMM50-206ENST00000494795 GRHPRQ9UBQ7 328 aa9.39□□□□□ -0.91
SAMM50-206ENST00000494795 FBXL2Q9UKC9 423 aa9.39□□□□□ -0.91
SAMM50-206ENST00000494795 ZFPL1O95159 310 aa9.39□□□□□ -0.91
SAMM50-206ENST00000494795 PNMTP11086 282 aa9.39□□□□□ -0.91
SAMM50-206ENST00000494795 SNRPBP14678 240 aaKnown RBP9.39□□□□□ -0.91
SAMM50-206ENST00000494795 EDNRAP25101 427 aa9.39□□□□□ -0.91
SAMM50-206ENST00000494795 SDHAP31040 664 aa9.39□□□□□ -0.91
SAMM50-206ENST00000494795 KRR1Q13601 381 aaKnown RBP9.39□□□□□ -0.91
SAMM50-206ENST00000494795 TMEM44Q2T9K0 475 aa9.39□□□□□ -0.91
SAMM50-206ENST00000494795 AGAP7PQ5VUJ5 663 aa9.39□□□□□ -0.91
SAMM50-206ENST00000494795 KMT5CQ86Y97 462 aa9.39□□□□□ -0.91
SAMM50-206ENST00000494795 IZUMO1Q8IYV9 350 aa9.39□□□□□ -0.91
SAMM50-206ENST00000494795 ZNF417Q8TAU3 575 aa9.39□□□□□ -0.91
SAMM50-206ENST00000494795 ZNF587Q96SQ5 575 aaPredicted RBP9.39□□□□□ -0.91
SAMM50-206ENST00000494795 TMEM43Q9BTV4 400 aa9.39□□□□□ -0.91
SAMM50-206ENST00000494795 MED18Q9BUE0 208 aa9.39□□□□□ -0.91
SAMM50-206ENST00000494795 DUSP23Q9BVJ7 150 aa9.39□□□□□ -0.91
SAMM50-206ENST00000494795 MRM2Q9UI43 246 aaKnown RBP9.39□□□□□ -0.91
SAMM50-206ENST00000494795 KCNG2Q9UJ96 466 aa9.39□□□□□ -0.91
SAMM50-206ENST00000494795 EXPH5Q8NEV8 1989 aa9.38□□□□□ -0.91
SAMM50-206ENST00000494795 PHF3Q92576 2039 aaKnown RBP9.38□□□□□ -0.91
SAMM50-206ENST00000494795 TRBV2A0A0J9YWF9 115 aa9.38□□□□□ -0.91
SAMM50-206ENST00000494795 SAGE2PA6NJ88 616 aa9.38□□□□□ -0.91
SAMM50-206ENST00000494795 ICMTO60725 284 aa9.38□□□□□ -0.91
SAMM50-206ENST00000494795 PPM1BO75688 479 aa9.38□□□□□ -0.91
SAMM50-206ENST00000494795 PNLIPRP2P54317 469 aa9.38□□□□□ -0.91
SAMM50-206ENST00000494795 TPTEP56180 551 aa9.38□□□□□ -0.91
SAMM50-206ENST00000494795 SIRPAP78324 504 aa9.38□□□□□ -0.91
SAMM50-206ENST00000494795 ACKR1Q16570 336 aa9.38□□□□□ -0.91
SAMM50-206ENST00000494795 CEP78Q5JTW2 689 aa9.38□□□□□ -0.91
SAMM50-206ENST00000494795 DDI2Q5TDH0 399 aa9.38□□□□□ -0.91
SAMM50-206ENST00000494795 OVCH1Q7RTY7 1134 aa9.38□□□□□ -0.91
SAMM50-206ENST00000494795 WDR5BQ86VZ2 330 aa9.38□□□□□ -0.91
SAMM50-206ENST00000494795 WDFY2Q96P53 400 aa9.38□□□□□ -0.91
SAMM50-206ENST00000494795 DERL3Q96Q80 235 aa9.38□□□□□ -0.91
SAMM50-206ENST00000494795 SEMA4CQ9C0C4 833 aa9.38□□□□□ -0.91
SAMM50-206ENST00000494795 TGIF2Q9GZN2 237 aa9.38□□□□□ -0.91
SAMM50-206ENST00000494795 PPP1R3EQ9H7J1 279 aa9.38□□□□□ -0.91
SAMM50-206ENST00000494795 MED29Q9NX70 200 aa9.38□□□□□ -0.91
SAMM50-206ENST00000494795 EP300Q09472 2414 aaPredicted RBP9.38□□□□□ -0.91
SAMM50-206ENST00000494795 A0A0B4J293 547 aa9.38□□□□□ -0.91
SAMM50-206ENST00000494795 CENPAP49450 140 aa9.38□□□□□ -0.91
SAMM50-206ENST00000494795 P2RX1P51575 399 aa9.38□□□□□ -0.91
SAMM50-206ENST00000494795 PRPS1P60891 318 aa9.38□□□□□ -0.91
SAMM50-206ENST00000494795 INSM1Q01101 510 aaPredicted RBP9.38□□□□□ -0.91
SAMM50-206ENST00000494795 ACY1Q03154 408 aa9.38□□□□□ -0.91
SAMM50-206ENST00000494795 SELENBP1Q13228 472 aa9.38□□□□□ -0.91
SAMM50-206ENST00000494795 IL18Q14116 193 aa9.38□□□□□ -0.91
SAMM50-206ENST00000494795 CDK5R1Q15078 307 aa9.38□□□□□ -0.91
SAMM50-206ENST00000494795 TUSC1Q2TAM9 212 aa9.38□□□□□ -0.91
SAMM50-206ENST00000494795 TIGD4Q8IY51 512 aa9.38□□□□□ -0.91
SAMM50-206ENST00000494795 DNAAF1Q8NEP3 725 aa9.38□□□□□ -0.91
SAMM50-206ENST00000494795 OR6N2Q8NGY6 317 aa9.38□□□□□ -0.91
SAMM50-206ENST00000494795 SLC35B4Q969S0 331 aa9.38□□□□□ -0.91
SAMM50-206ENST00000494795 TXNDC15Q96J42 360 aa9.38□□□□□ -0.91
SAMM50-206ENST00000494795 UBL7Q96S82 380 aaPredicted RBP9.38□□□□□ -0.91
SAMM50-206ENST00000494795 GPX7Q96SL4 187 aaPredicted RBP9.38□□□□□ -0.91
SAMM50-206ENST00000494795 EMC6Q9BV81 110 aa9.38□□□□□ -0.91
SAMM50-206ENST00000494795 BAIAP2Q9UQB8 552 aa9.38□□□□□ -0.91
SAMM50-206ENST00000494795 UGT2A1Q9Y4X1 527 aa9.38□□□□□ -0.91
SAMM50-206ENST00000494795 URB1O60287 2271 aaKnown RBP9.38□□□□□ -0.91
SAMM50-206ENST00000494795 NPIPB7O75200 414 aa9.37□□□□□ -0.91
SAMM50-206ENST00000494795 GLCEO94923 617 aa9.37□□□□□ -0.91
SAMM50-206ENST00000494795 NAT2P11245 290 aa9.37□□□□□ -0.91
SAMM50-206ENST00000494795 PTHLHP12272 177 aa9.37□□□□□ -0.91
SAMM50-206ENST00000494795 CTLA4P16410 223 aa9.37□□□□□ -0.91
SAMM50-206ENST00000494795 ATF1P18846 271 aa9.37□□□□□ -0.91
SAMM50-206ENST00000494795 PTGDSP41222 190 aa9.37□□□□□ -0.91
SAMM50-206ENST00000494795 SOX2P48431 317 aa9.37□□□□□ -0.91
SAMM50-206ENST00000494795 FOXF1Q12946 379 aa9.37□□□□□ -0.91
SAMM50-206ENST00000494795 PLA2G7Q13093 441 aa9.37□□□□□ -0.91
SAMM50-206ENST00000494795 CDONQ4KMG0 1287 aa9.37□□□□□ -0.91
SAMM50-206ENST00000494795 CPEB2Q7Z5Q1 589 aaKnown RBP9.37□□□□□ -0.91
SAMM50-206ENST00000494795 RABEPKQ7Z6M1 372 aa9.37□□□□□ -0.91
SAMM50-206ENST00000494795 PXKQ7Z7A4 578 aa9.37□□□□□ -0.91
SAMM50-206ENST00000494795 ZNF440Q8IYI8 595 aa9.37□□□□□ -0.91
SAMM50-206ENST00000494795 IL17RDQ8NFM7 739 aa9.37□□□□□ -0.91
SAMM50-206ENST00000494795 OR8K3Q8NH51 312 aa9.37□□□□□ -0.91
SAMM50-206ENST00000494795 GFM1Q96RP9 751 aaKnown RBP9.37□□□□□ -0.91
SAMM50-206ENST00000494795 TAS2R10Q9NYW0 307 aa9.37□□□□□ -0.91
SAMM50-206ENST00000494795 DCHS1Q96JQ0 3298 aa9.37□□□□□ -0.91
SAMM50-206ENST00000494795 VSTM2BA6NLU5 285 aa9.37□□□□□ -0.91
SAMM50-206ENST00000494795 ZNF814B7Z6K7 855 aa9.37□□□□□ -0.91
SAMM50-206ENST00000494795 D6RAR5 112 aa9.37□□□□□ -0.91
SAMM50-206ENST00000494795 RAMP1O60894 148 aa9.37□□□□□ -0.91
SAMM50-206ENST00000494795 UMODP07911 640 aa9.37□□□□□ -0.91
SAMM50-206ENST00000494795 OR2T7P0C7T2 308 aa9.37□□□□□ -0.91
SAMM50-206ENST00000494795 GP1BBP13224 206 aa9.37□□□□□ -0.91
SAMM50-206ENST00000494795 SRP9P49458 86 aaKnown RBP9.37□□□□□ -0.91
SAMM50-206ENST00000494795 EVX1P49640 407 aa9.37□□□□□ -0.91
SAMM50-206ENST00000494795 GGTLC2Q14390 218 aa9.37□□□□□ -0.91
SAMM50-206ENST00000494795 ZNF684Q5T5D7 378 aa9.37□□□□□ -0.91
SAMM50-206ENST00000494795 C1orf140Q5VVS0 124 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms