RNA–Protein interactions for RNA: ENST00000494503.1

UBR4-216, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-216ENST00000494503 DVL1P1P54792 670 aaPredicted RBP8.31□□□□□ -1.08
UBR4-216ENST00000494503 AQP5P55064 265 aa8.31□□□□□ -1.08
UBR4-216ENST00000494503 RPS23P62266 143 aaKnown RBP8.31□□□□□ -1.08
UBR4-216ENST00000494503 SCGB2A2Q13296 93 aa8.31□□□□□ -1.08
UBR4-216ENST00000494503 MAPK11Q15759 364 aa8.31□□□□□ -1.08
UBR4-216ENST00000494503 NKPD1Q17RQ9 610 aa8.31□□□□□ -1.08
UBR4-216ENST00000494503 ALG10BQ5I7T1 473 aa8.31□□□□□ -1.08
UBR4-216ENST00000494503 CEP85LQ5SZL2 805 aa8.31□□□□□ -1.08
UBR4-216ENST00000494503 FAM69AQ5T7M9 428 aa8.31□□□□□ -1.08
UBR4-216ENST00000494503 FAHD2BQ6P2I3 314 aaPredicted RBP8.31□□□□□ -1.08
UBR4-216ENST00000494503 H1FNTQ75WM6 255 aaPredicted RBP8.31□□□□□ -1.08
UBR4-216ENST00000494503 ZNF771Q7L3S4 317 aaPredicted RBP8.31□□□□□ -1.08
UBR4-216ENST00000494503 MEX3DQ86XN8 651 aaKnown RBP8.31□□□□□ -1.08
UBR4-216ENST00000494503 C3orf56Q8N813 242 aa8.31□□□□□ -1.08
UBR4-216ENST00000494503 IL17RDQ8NFM7 739 aa8.31□□□□□ -1.08
UBR4-216ENST00000494503 AENQ8WTP8 325 aaKnown RBP8.31□□□□□ -1.08
UBR4-216ENST00000494503 TAAR8Q969N4 342 aa8.31□□□□□ -1.08
UBR4-216ENST00000494503 VPS33AQ96AX1 596 aa8.31□□□□□ -1.08
UBR4-216ENST00000494503 FAHD2AQ96GK7 314 aa8.31□□□□□ -1.08
UBR4-216ENST00000494503 OR2M2Q96R28 347 aa8.31□□□□□ -1.08
UBR4-216ENST00000494503 PTDSS2Q9BVG9 487 aa8.31□□□□□ -1.08
UBR4-216ENST00000494503 ASPNQ9BXN1 380 aa8.31□□□□□ -1.08
UBR4-216ENST00000494503 MRPL37Q9BZE1 423 aaKnown RBP8.31□□□□□ -1.08
UBR4-216ENST00000494503 ULBP2Q9BZM5 246 aa8.31□□□□□ -1.08
UBR4-216ENST00000494503 HIF1ANQ9NWT6 349 aa8.31□□□□□ -1.08
UBR4-216ENST00000494503 THUMPD1Q9NXG2 353 aaKnown RBP8.31□□□□□ -1.08
UBR4-216ENST00000494503 TREM2Q9NZC2 230 aa8.31□□□□□ -1.08
UBR4-216ENST00000494503 GPR45Q9Y5Y3 372 aa8.31□□□□□ -1.08
UBR4-216ENST00000494503 TRAV36DV7A0A075B6V5 113 aa8.3□□□□□ -1.08
UBR4-216ENST00000494503 A0A1B0GWA3 101 aa8.3□□□□□ -1.08
UBR4-216ENST00000494503 FTCDNL1E5RQL4 147 aa8.3□□□□□ -1.08
UBR4-216ENST00000494503 C11orf98E9PRG8 122 aa8.3□□□□□ -1.08
UBR4-216ENST00000494503 HDAC3O15379 428 aa8.3□□□□□ -1.08
UBR4-216ENST00000494503 CDC14BO60729 498 aa8.3□□□□□ -1.08
UBR4-216ENST00000494503 NPIPB7O75200 414 aa8.3□□□□□ -1.08
UBR4-216ENST00000494503 NAT2P11245 290 aa8.3□□□□□ -1.08
UBR4-216ENST00000494503 NR4A1P22736 598 aa8.3□□□□□ -1.08
UBR4-216ENST00000494503 CFPP27918 469 aa8.3□□□□□ -1.08
UBR4-216ENST00000494503 GIPRP48546 466 aa8.3□□□□□ -1.08
UBR4-216ENST00000494503 POLR2JP52435 117 aaKnown RBP8.3□□□□□ -1.08
UBR4-216ENST00000494503 SEC24CP53992 1094 aa8.3□□□□□ -1.08
UBR4-216ENST00000494503 RGS8P57771 180 aaPredicted RBP8.3□□□□□ -1.08
UBR4-216ENST00000494503 EGR4Q05215 589 aa8.3□□□□□ -1.08
UBR4-216ENST00000494503 PMS2P3Q13401 168 aa8.3□□□□□ -1.08
UBR4-216ENST00000494503 CAMK2DQ13557 499 aa8.3□□□□□ -1.08
UBR4-216ENST00000494503 RIN1Q13671 783 aa8.3□□□□□ -1.08
UBR4-216ENST00000494503 PDCD4Q53EL6 469 aaKnown RBP8.3□□□□□ -1.08
UBR4-216ENST00000494503 PHYHD1Q5SRE7 291 aa8.3□□□□□ -1.08
UBR4-216ENST00000494503 CARM1Q86X55 608 aa8.3□□□□□ -1.08
UBR4-216ENST00000494503 SNX32Q86XE0 403 aa8.3□□□□□ -1.08
UBR4-216ENST00000494503 CCDC36Q8IYA8 594 aa8.3□□□□□ -1.08
UBR4-216ENST00000494503 FAM169BQ8N8A8 192 aa8.3□□□□□ -1.08
UBR4-216ENST00000494503 OR9I1Q8NGQ6 314 aa8.3□□□□□ -1.08
UBR4-216ENST00000494503 CLDND2Q8NHS1 167 aa8.3□□□□□ -1.08
UBR4-216ENST00000494503 NFKBIDQ8NI38 313 aa8.3□□□□□ -1.08
UBR4-216ENST00000494503 BBS10Q8TAM1 723 aa8.3□□□□□ -1.08
UBR4-216ENST00000494503 ZNF418Q8TF45 676 aaPredicted RBP8.3□□□□□ -1.08
UBR4-216ENST00000494503 GCDHQ92947 438 aaPredicted RBP8.3□□□□□ -1.08
UBR4-216ENST00000494503 MRPL24Q96A35 216 aaKnown RBP8.3□□□□□ -1.08
UBR4-216ENST00000494503 TMEM186Q96B77 213 aa8.3□□□□□ -1.08
UBR4-216ENST00000494503 BOD1Q96IK1 185 aa8.3□□□□□ -1.08
UBR4-216ENST00000494503 LRRC37BQ96QE4 947 aa8.3□□□□□ -1.08
UBR4-216ENST00000494503 EPYCQ99645 322 aa8.3□□□□□ -1.08
UBR4-216ENST00000494503 PLA2G12AQ9BZM1 189 aa8.3□□□□□ -1.08
UBR4-216ENST00000494503 MS4A5Q9H3V2 200 aa8.3□□□□□ -1.08
UBR4-216ENST00000494503 RAD21L1Q9H4I0 556 aa8.3□□□□□ -1.08
UBR4-216ENST00000494503 MED29Q9NX70 200 aa8.3□□□□□ -1.08
UBR4-216ENST00000494503 B3GAT1Q9P2W7 334 aa8.3□□□□□ -1.08
UBR4-216ENST00000494503 TMEM129A0AVI4 362 aa8.29□□□□□ -1.08
UBR4-216ENST00000494503 FAM157AC9JC47 383 aa8.29□□□□□ -1.08
UBR4-216ENST00000494503 RPL36A-HNRNPH2H7BZ11 118 aa8.29□□□□□ -1.08
UBR4-216ENST00000494503 CLIC1O00299 241 aa8.29□□□□□ -1.08
UBR4-216ENST00000494503 UBDO15205 165 aa8.29□□□□□ -1.08
UBR4-216ENST00000494503 SPRY1O43609 319 aaPredicted RBP8.29□□□□□ -1.08
UBR4-216ENST00000494503 OR6A2O95222 327 aa8.29□□□□□ -1.08
UBR4-216ENST00000494503 VENTXO95231 258 aa8.29□□□□□ -1.08
UBR4-216ENST00000494503 HPXP02790 462 aa8.29□□□□□ -1.08
UBR4-216ENST00000494503 MSMBP08118 114 aa8.29□□□□□ -1.08
UBR4-216ENST00000494503 FAM157BP0CG42 384 aa8.29□□□□□ -1.08
UBR4-216ENST00000494503 HLA-DOBP13765 273 aa8.29□□□□□ -1.08
UBR4-216ENST00000494503 ACHEP22303 614 aa8.29□□□□□ -1.08
UBR4-216ENST00000494503 COL8A2P25067 703 aa8.29□□□□□ -1.08
UBR4-216ENST00000494503 HTR2AP28223 471 aa8.29□□□□□ -1.08
UBR4-216ENST00000494503 AQP1P29972 269 aa8.29□□□□□ -1.08
UBR4-216ENST00000494503 CSNK1A1P48729 337 aa8.29□□□□□ -1.08
UBR4-216ENST00000494503 MVDP53602 400 aa8.29□□□□□ -1.08
UBR4-216ENST00000494503 SELENOVP59797 346 aa8.29□□□□□ -1.08
UBR4-216ENST00000494503 STX1BP61266 288 aa8.29□□□□□ -1.08
UBR4-216ENST00000494503 RAB1AP62820 205 aa8.29□□□□□ -1.08
UBR4-216ENST00000494503 RAB39AQ14964 217 aa8.29□□□□□ -1.08
UBR4-216ENST00000494503 MFSD13AQ14CX5 517 aa8.29□□□□□ -1.08
UBR4-216ENST00000494503 RGNQ15493 299 aa8.29□□□□□ -1.08
UBR4-216ENST00000494503 SLC9B1Q4ZJI4 515 aa8.29□□□□□ -1.08
UBR4-216ENST00000494503 GCNT6Q5T4J0 391 aa8.29□□□□□ -1.08
UBR4-216ENST00000494503 REP15Q6BDI9 236 aa8.29□□□□□ -1.08
UBR4-216ENST00000494503 SLC2A7Q6PXP3 512 aa8.29□□□□□ -1.08
UBR4-216ENST00000494503 C5orf46Q6UWT4 87 aa8.29□□□□□ -1.08
UBR4-216ENST00000494503 LRP11Q86VZ4 500 aa8.29□□□□□ -1.08
UBR4-216ENST00000494503 KRT73Q86Y46 540 aa8.29□□□□□ -1.08
UBR4-216ENST00000494503 ANKK1Q8NFD2 765 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms