RNA–Protein interactions for RNA: ENST00000494458.1

MSH5-217, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 520 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-217ENST00000494458 MRPL13Q9BYD1 178 aaKnown RBP6.1□□□□□ -1.43
MSH5-217ENST00000494458 OR2B2Q9GZK3 357 aa6.1□□□□□ -1.43
MSH5-217ENST00000494458 YIPF3Q9GZM5 350 aa6.1□□□□□ -1.43
MSH5-217ENST00000494458 NDEL1Q9GZM8 345 aa6.1□□□□□ -1.43
MSH5-217ENST00000494458 NXF2Q9GZY0 626 aaKnown RBP6.1□□□□□ -1.43
MSH5-217ENST00000494458 MED20Q9H944 212 aa6.1□□□□□ -1.43
MSH5-217ENST00000494458 CHST11Q9NPF2 352 aa6.1□□□□□ -1.43
MSH5-217ENST00000494458 SERINC1Q9NRX5 453 aa6.1□□□□□ -1.43
MSH5-217ENST00000494458 INIPQ9NRY2 104 aa6.1□□□□□ -1.43
MSH5-217ENST00000494458 DEPPQ9NTK1 212 aa6.1□□□□□ -1.43
MSH5-217ENST00000494458 ASB6Q9NWX5 421 aa6.1□□□□□ -1.43
MSH5-217ENST00000494458 ALKBH4Q9NXW9 302 aa6.1□□□□□ -1.43
MSH5-217ENST00000494458 SEC14L4Q9UDX3 406 aa6.1□□□□□ -1.43
MSH5-217ENST00000494458 TEKT2Q9UIF3 430 aa6.1□□□□□ -1.43
MSH5-217ENST00000494458 ZMIZ1Q9ULJ6 1067 aa6.1□□□□□ -1.43
MSH5-217ENST00000494458 WASF3Q9UPY6 502 aa6.1□□□□□ -1.43
MSH5-217ENST00000494458 RPH3AQ9Y2J0 694 aaPredicted RBP6.1□□□□□ -1.43
MSH5-217ENST00000494458 PCDHGB7Q9Y5F8 929 aa6.1□□□□□ -1.43
MSH5-217ENST00000494458 SPIN1Q9Y657 262 aaPredicted RBP6.1□□□□□ -1.43
MSH5-217ENST00000494458 FKBP7Q9Y680 259 aa6.1□□□□□ -1.43
MSH5-217ENST00000494458 A3GALT2U3KPV4 340 aa6.1□□□□□ -1.43
MSH5-217ENST00000494458 RIF1Q5UIP0 2472 aaKnown RBP6.1□□□□□ -1.43
MSH5-217ENST00000494458 ZFHX2Q9C0A1 2572 aaPredicted RBP6.1□□□□□ -1.43
MSH5-217ENST00000494458 DOCK10Q96BY6 2186 aa6.09□□□□□ -1.43
MSH5-217ENST00000494458 ARPC4-TTLL3A0A0A6YYG9 625 aa6.09□□□□□ -1.43
MSH5-217ENST00000494458 IGLV1-36A0A0B4J1U3 117 aa6.09□□□□□ -1.43
MSH5-217ENST00000494458 TEX13CA0A0J9YWL9 993 aa6.09□□□□□ -1.43
MSH5-217ENST00000494458 A0A1W2PPW3 197 aa6.09□□□□□ -1.43
MSH5-217ENST00000494458 OR2M5A3KFT3 312 aa6.09□□□□□ -1.43
MSH5-217ENST00000494458 PRSS37A4D1T9 235 aa6.09□□□□□ -1.43
MSH5-217ENST00000494458 AQP7P3A6NL99 342 aa6.09□□□□□ -1.43
MSH5-217ENST00000494458 CENPBD1B2RD01 187 aa6.09□□□□□ -1.43
MSH5-217ENST00000494458 DCTN6O00399 190 aa6.09□□□□□ -1.43
MSH5-217ENST00000494458 OGG1O15527 345 aa6.09□□□□□ -1.43
MSH5-217ENST00000494458 PLPP2O43688 288 aa6.09□□□□□ -1.43
MSH5-217ENST00000494458 GPX5O75715 221 aa6.09□□□□□ -1.43
MSH5-217ENST00000494458 SC5DO75845 299 aa6.09□□□□□ -1.43
MSH5-217ENST00000494458 GLSO94925 669 aaPredicted RBP6.09□□□□□ -1.43
MSH5-217ENST00000494458 BCL10O95999 233 aa6.09□□□□□ -1.43
MSH5-217ENST00000494458 LALBAP00709 142 aa6.09□□□□□ -1.43
MSH5-217ENST00000494458 TFP02787 698 aa6.09□□□□□ -1.43
MSH5-217ENST00000494458 P04436 131 aa6.09□□□□□ -1.43
MSH5-217ENST00000494458 F13BP05160 661 aa6.09□□□□□ -1.43
MSH5-217ENST00000494458 HPNP05981 417 aa6.09□□□□□ -1.43
MSH5-217ENST00000494458 MYL12AP19105 171 aa6.09□□□□□ -1.43
MSH5-217ENST00000494458 SHC1P29353 583 aa6.09□□□□□ -1.43
MSH5-217ENST00000494458 RPL4P36578 427 aaKnown RBP6.09□□□□□ -1.43
MSH5-217ENST00000494458 GFRA1P56159 465 aa6.09□□□□□ -1.43
MSH5-217ENST00000494458 ACTC1P68032 377 aa6.09□□□□□ -1.43
MSH5-217ENST00000494458 ACTA1P68133 377 aa6.09□□□□□ -1.43
MSH5-217ENST00000494458 ZNF85Q03923 595 aa6.09□□□□□ -1.43
MSH5-217ENST00000494458 HSF2Q03933 536 aa6.09□□□□□ -1.43
MSH5-217ENST00000494458 LGALS3BPQ08380 585 aa6.09□□□□□ -1.43
MSH5-217ENST00000494458 PUDPQ08623 228 aa6.09□□□□□ -1.43
MSH5-217ENST00000494458 SPCS2Q15005 226 aa6.09□□□□□ -1.43
MSH5-217ENST00000494458 HIST3H3Q16695 136 aa6.09□□□□□ -1.43
MSH5-217ENST00000494458 TIMM50Q3ZCQ8 353 aa6.09□□□□□ -1.43
MSH5-217ENST00000494458 GXYLT1Q4G148 440 aa6.09□□□□□ -1.43
MSH5-217ENST00000494458 TEX30Q5JUR7 227 aa6.09□□□□□ -1.43
MSH5-217ENST00000494458 PRAMEF20Q5VT98 475 aa6.09□□□□□ -1.43
MSH5-217ENST00000494458 KCTD20Q7Z5Y7 419 aa6.09□□□□□ -1.43
MSH5-217ENST00000494458 LHFPL3Q86UP9 236 aa6.09□□□□□ -1.43
MSH5-217ENST00000494458 IGFN1Q86VF2 1251 aa6.09□□□□□ -1.43
MSH5-217ENST00000494458 MARCH9Q86YJ5 346 aa6.09□□□□□ -1.43
MSH5-217ENST00000494458 TMEM99Q8N816 258 aa6.09□□□□□ -1.43
MSH5-217ENST00000494458 CYB561A3Q8NBI2 242 aa6.09□□□□□ -1.43
MSH5-217ENST00000494458 SDR9C7Q8NEX9 313 aa6.09□□□□□ -1.43
MSH5-217ENST00000494458 OR4K17Q8NGC6 315 aa6.09□□□□□ -1.43
MSH5-217ENST00000494458 ASB10Q8WXI3 467 aa6.09□□□□□ -1.43
MSH5-217ENST00000494458 RASD2Q96D21 266 aa6.09□□□□□ -1.43
MSH5-217ENST00000494458 NXPE2Q96DL1 559 aa6.09□□□□□ -1.43
MSH5-217ENST00000494458 C5orf34Q96MH7 638 aa6.09□□□□□ -1.43
MSH5-217ENST00000494458 UBL7Q96S82 380 aaPredicted RBP6.09□□□□□ -1.43
MSH5-217ENST00000494458 MNTQ99583 582 aa6.09□□□□□ -1.43
MSH5-217ENST00000494458 PIGQQ9BRB3 760 aa6.09□□□□□ -1.43
MSH5-217ENST00000494458 ALG12Q9BV10 488 aa6.09□□□□□ -1.43
MSH5-217ENST00000494458 ASPNQ9BXN1 380 aa6.09□□□□□ -1.43
MSH5-217ENST00000494458 ZNF552Q9H707 407 aaPredicted RBP6.09□□□□□ -1.43
MSH5-217ENST00000494458 ZFP64Q9NPA5 681 aa6.09□□□□□ -1.43
MSH5-217ENST00000494458 TIMMDC1Q9NPL8 285 aa6.09□□□□□ -1.43
MSH5-217ENST00000494458 BABAM2Q9NXR7 383 aa6.09□□□□□ -1.43
MSH5-217ENST00000494458 GRHPRQ9UBQ7 328 aa6.09□□□□□ -1.43
MSH5-217ENST00000494458 VDAC3Q9Y277 283 aa6.09□□□□□ -1.43
MSH5-217ENST00000494458 MPDZO75970 2070 aa6.09□□□□□ -1.43
MSH5-217ENST00000494458 CPAMD8Q8IZJ3 1885 aa6.09□□□□□ -1.44
MSH5-217ENST00000494458 A0A0G2JMM0 328 aa6.08□□□□□ -1.44
MSH5-217ENST00000494458 TRDV1A0A1B0GX56 115 aa6.08□□□□□ -1.44
MSH5-217ENST00000494458 A0A1W2PPB8 328 aa6.08□□□□□ -1.44
MSH5-217ENST00000494458 A0A1W2PQL4 384 aaPredicted RBP6.08□□□□□ -1.44
MSH5-217ENST00000494458 A0A1W2PRS3 328 aa6.08□□□□□ -1.44
MSH5-217ENST00000494458 SLC22A23A1A5C7 686 aa6.08□□□□□ -1.44
MSH5-217ENST00000494458 PINLYPA6NC86 204 aa6.08□□□□□ -1.44
MSH5-217ENST00000494458 A6NIZ1 184 aa6.08□□□□□ -1.44
MSH5-217ENST00000494458 C12orf71A8MTZ7 269 aa6.08□□□□□ -1.44
MSH5-217ENST00000494458 KIR3DP1A8MWS1 328 aa6.08□□□□□ -1.44
MSH5-217ENST00000494458 SHISA8B8ZZ34 492 aa6.08□□□□□ -1.44
MSH5-217ENST00000494458 MYL12BO14950 172 aa6.08□□□□□ -1.44
MSH5-217ENST00000494458 EFSO43281 561 aa6.08□□□□□ -1.44
MSH5-217ENST00000494458 TRAF3IP2O43734 574 aaPredicted RBP6.08□□□□□ -1.44
MSH5-217ENST00000494458 AIREO43918 545 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms