RNA–Protein interactions for RNA: ENST00000494339.5

KPNA1-210, Transcript of karyopherin subunit alpha 1, humanhuman

TSL 2

Gene KPNA1, Length 1,923 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA1-210ENST00000494339 PRR23D1E9PI22 279 aaPredicted RBP18.49■□□□□ 0.55
KPNA1-210ENST00000494339 IDH3BO43837 385 aa18.49■□□□□ 0.55
KPNA1-210ENST00000494339 NOL3O60936 208 aaKnown RBP18.49■□□□□ 0.55
KPNA1-210ENST00000494339 TRMUO75648 421 aaKnown RBP18.49■□□□□ 0.55
KPNA1-210ENST00000494339 PRR23D2P0DMB1 279 aaPredicted RBP18.49■□□□□ 0.55
KPNA1-210ENST00000494339 HLA-DOBP13765 273 aa18.49■□□□□ 0.55
KPNA1-210ENST00000494339 POU3F2P20265 443 aaPredicted RBP18.49■□□□□ 0.55
KPNA1-210ENST00000494339 SDHAP31040 664 aa18.49■□□□□ 0.55
KPNA1-210ENST00000494339 KLHL22Q53GT1 634 aa18.49■□□□□ 0.55
KPNA1-210ENST00000494339 NXNL2Q5VZ03 156 aa18.49■□□□□ 0.55
KPNA1-210ENST00000494339 LRRC69Q6ZNQ3 347 aa18.49■□□□□ 0.55
KPNA1-210ENST00000494339 SLC37A3Q8NCC5 494 aa18.49■□□□□ 0.55
KPNA1-210ENST00000494339 TM9SF4Q92544 642 aa18.49■□□□□ 0.55
KPNA1-210ENST00000494339 PTP4A1Q93096 173 aa18.49■□□□□ 0.55
KPNA1-210ENST00000494339 NMNAT3Q96T66 252 aa18.49■□□□□ 0.55
KPNA1-210ENST00000494339 MRPS18AQ9NVS2 196 aaKnown RBP18.49■□□□□ 0.55
KPNA1-210ENST00000494339 PTTG2Q9NZH5 202 aa18.49■□□□□ 0.55
KPNA1-210ENST00000494339 H2AFY2Q9P0M6 372 aaPredicted RBP18.49■□□□□ 0.55
KPNA1-210ENST00000494339 WARS2Q9UGM6 360 aaKnown RBP18.49■□□□□ 0.55
KPNA1-210ENST00000494339 ZNF346Q9UL40 294 aaKnown RBP18.49■□□□□ 0.55
KPNA1-210ENST00000494339 ACOT7O00154 380 aa18.48■□□□□ 0.55
KPNA1-210ENST00000494339 PMS2P2O95744 297 aa18.48■□□□□ 0.55
KPNA1-210ENST00000494339 APEHP13798 732 aaKnown RBP18.48■□□□□ 0.55
KPNA1-210ENST00000494339 KLK2P20151 261 aa18.48■□□□□ 0.55
KPNA1-210ENST00000494339 CDH11P55287 796 aa18.48■□□□□ 0.55
KPNA1-210ENST00000494339 RNFT1Q5M7Z0 435 aa18.48■□□□□ 0.55
KPNA1-210ENST00000494339 RNLSQ5VYX0 342 aa18.48■□□□□ 0.55
KPNA1-210ENST00000494339 TMEM80Q96HE8 168 aa18.48■□□□□ 0.55
KPNA1-210ENST00000494339 TSC22D3Q99576 134 aa18.48■□□□□ 0.55
KPNA1-210ENST00000494339 KLHL21Q9UJP4 597 aa18.48■□□□□ 0.55
KPNA1-210ENST00000494339 MED19A0JLT2 244 aaPredicted RBP18.47■□□□□ 0.55
KPNA1-210ENST00000494339 ZNF814B7Z6K7 855 aa18.47■□□□□ 0.55
KPNA1-210ENST00000494339 EIF1AYO14602 144 aaKnown RBP18.47■□□□□ 0.55
KPNA1-210ENST00000494339 IMPA2O14732 288 aa18.47■□□□□ 0.55
KPNA1-210ENST00000494339 PDGFAP04085 211 aa18.47■□□□□ 0.55
KPNA1-210ENST00000494339 CLUP10909 449 aa18.47■□□□□ 0.55
KPNA1-210ENST00000494339 SH3BGRP55822 239 aaPredicted RBP18.47■□□□□ 0.55
KPNA1-210ENST00000494339 SLC35A1P78382 337 aa18.47■□□□□ 0.55
KPNA1-210ENST00000494339 ACKR1Q16570 336 aa18.47■□□□□ 0.55
KPNA1-210ENST00000494339 GGNQ86UU5 652 aa18.47■□□□□ 0.55
KPNA1-210ENST00000494339 FAM109AQ8N4B1 249 aa18.47■□□□□ 0.55
KPNA1-210ENST00000494339 ZPLD1Q8TCW7 415 aa18.47■□□□□ 0.55
KPNA1-210ENST00000494339 RAB2BQ8WUD1 216 aa18.47■□□□□ 0.55
KPNA1-210ENST00000494339 PTPRQQ9UMZ3 2332 aa18.47■□□□□ 0.55
KPNA1-210ENST00000494339 KIAA1549Q9HCM3 1950 aa18.47■□□□□ 0.55
KPNA1-210ENST00000494339 M0R3G1 203 aa18.47■□□□□ 0.55
KPNA1-210ENST00000494339 FZD7O75084 574 aa18.47■□□□□ 0.55
KPNA1-210ENST00000494339 GYPBP06028 91 aa18.47■□□□□ 0.55
KPNA1-210ENST00000494339 PAICSP22234 425 aaKnown RBP18.47■□□□□ 0.55
KPNA1-210ENST00000494339 PSMB9P28065 219 aa18.47■□□□□ 0.55
KPNA1-210ENST00000494339 CDKN2AP42771 156 aaKnown RBP18.47■□□□□ 0.55
KPNA1-210ENST00000494339 RAB40BQ12829 278 aa18.47■□□□□ 0.55
KPNA1-210ENST00000494339 ZP4Q12836 540 aa18.47■□□□□ 0.55
KPNA1-210ENST00000494339 KRR1Q13601 381 aaKnown RBP18.47■□□□□ 0.55
KPNA1-210ENST00000494339 KLHL12Q53G59 568 aa18.47■□□□□ 0.55
KPNA1-210ENST00000494339 IGFL3Q6UXB1 125 aa18.47■□□□□ 0.55
KPNA1-210ENST00000494339 JAZF1Q86VZ6 243 aa18.47■□□□□ 0.55
KPNA1-210ENST00000494339 NPEPL1Q8NDH3 523 aa18.47■□□□□ 0.55
KPNA1-210ENST00000494339 OR9Q1Q8NGQ5 310 aa18.47■□□□□ 0.55
KPNA1-210ENST00000494339 DEFB127Q9H1M4 99 aa18.47■□□□□ 0.55
KPNA1-210ENST00000494339 OR51V1Q9H2C8 321 aa18.47■□□□□ 0.55
KPNA1-210ENST00000494339 A0A1W2PRG6 482 aa18.46■□□□□ 0.55
KPNA1-210ENST00000494339 C1QTNF9BB2RNN3 333 aa18.46■□□□□ 0.55
KPNA1-210ENST00000494339 K7EM74 188 aa18.46■□□□□ 0.55
KPNA1-210ENST00000494339 APOL3O95236 402 aa18.46■□□□□ 0.55
KPNA1-210ENST00000494339 TXNDC12O95881 172 aa18.46■□□□□ 0.55
KPNA1-210ENST00000494339 ITGB2P05107 769 aa18.46■□□□□ 0.55
KPNA1-210ENST00000494339 C1QTNF9P0C862 333 aa18.46■□□□□ 0.55
KPNA1-210ENST00000494339 P2RY4P51582 365 aa18.46■□□□□ 0.55
KPNA1-210ENST00000494339 SUCLG1P53597 346 aaKnown RBP18.46■□□□□ 0.55
KPNA1-210ENST00000494339 SLC16A1P53985 500 aa18.46■□□□□ 0.55
KPNA1-210ENST00000494339 TMPRSS3P57727 454 aa18.46■□□□□ 0.55
KPNA1-210ENST00000494339 POU3F1Q03052 451 aaPredicted RBP18.46■□□□□ 0.55
KPNA1-210ENST00000494339 SLC10A1Q14973 349 aa18.46■□□□□ 0.55
KPNA1-210ENST00000494339 MESTQ5EB52 335 aa18.46■□□□□ 0.55
KPNA1-210ENST00000494339 GPR139Q6DWJ6 353 aa18.46■□□□□ 0.55
KPNA1-210ENST00000494339 NIPAL3Q6P499 406 aa18.46■□□□□ 0.55
KPNA1-210ENST00000494339 LEG1Q6P5S2 330 aa18.46■□□□□ 0.55
KPNA1-210ENST00000494339 B3GLCTQ6Y288 498 aa18.46■□□□□ 0.55
KPNA1-210ENST00000494339 GPAT4Q86UL3 456 aa18.46■□□□□ 0.55
KPNA1-210ENST00000494339 GID4Q8IVV7 300 aa18.46■□□□□ 0.55
KPNA1-210ENST00000494339 C12orf43Q96C57 262 aaKnown RBP18.46■□□□□ 0.55
KPNA1-210ENST00000494339 IGHV3-15A0A0B4J1V0 119 aa18.45■□□□□ 0.54
KPNA1-210ENST00000494339 OR6C68A6NDL8 312 aa18.45■□□□□ 0.54
KPNA1-210ENST00000494339 MKRN2OSH3BPM6 223 aa18.45■□□□□ 0.54
KPNA1-210ENST00000494339 H7C1C5 153 aa18.45■□□□□ 0.54
KPNA1-210ENST00000494339 RAMP1O60894 148 aa18.45■□□□□ 0.54
KPNA1-210ENST00000494339 LCKP06239 509 aa18.45■□□□□ 0.54
KPNA1-210ENST00000494339 MTNR1AP48039 350 aa18.45■□□□□ 0.54
KPNA1-210ENST00000494339 RPL27P61353 136 aaKnown RBP18.45■□□□□ 0.54
KPNA1-210ENST00000494339 RPS7P62081 194 aaKnown RBP18.45■□□□□ 0.54
KPNA1-210ENST00000494339 LCN6P62502 163 aa18.45■□□□□ 0.54
KPNA1-210ENST00000494339 CSNK2A1P68400 391 aaPredicted RBP18.45■□□□□ 0.54
KPNA1-210ENST00000494339 MELKQ14680 651 aa18.45■□□□□ 0.54
KPNA1-210ENST00000494339 EMC4Q5J8M3 183 aa18.45■□□□□ 0.54
KPNA1-210ENST00000494339 TMEM225Q6GV28 225 aa18.45■□□□□ 0.54
KPNA1-210ENST00000494339 PAQR6Q6TCH4 344 aa18.45■□□□□ 0.54
KPNA1-210ENST00000494339 TRILQ7L0X0 811 aa18.45■□□□□ 0.54
KPNA1-210ENST00000494339 EXTL1Q92935 676 aa18.45■□□□□ 0.54
KPNA1-210ENST00000494339 RNFT2Q96EX2 444 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms