RNA–Protein interactions for RNA: ENST00000493923.1

HDAC6-234, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 404 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-234ENST00000493923 FAM173AQ9BQD7 235 aa7.41□□□□□ -1.22
HDAC6-234ENST00000493923 CHCHD6Q9BRQ6 235 aa7.41□□□□□ -1.22
HDAC6-234ENST00000493923 MED18Q9BUE0 208 aa7.41□□□□□ -1.22
HDAC6-234ENST00000493923 CDCA4Q9BXL8 241 aa7.41□□□□□ -1.22
HDAC6-234ENST00000493923 GABARAPL3Q9BY60 117 aa7.41□□□□□ -1.22
HDAC6-234ENST00000493923 WWTR1Q9GZV5 400 aa7.41□□□□□ -1.22
HDAC6-234ENST00000493923 GSTO2Q9H4Y5 243 aa7.41□□□□□ -1.22
HDAC6-234ENST00000493923 SLC52A3Q9NQ40 469 aa7.41□□□□□ -1.22
HDAC6-234ENST00000493923 COQ3Q9NZJ6 369 aa7.41□□□□□ -1.22
HDAC6-234ENST00000493923 COPZ2Q9P299 210 aa7.41□□□□□ -1.22
HDAC6-234ENST00000493923 Q9UFV3 132 aa7.41□□□□□ -1.22
HDAC6-234ENST00000493923 CES1P1Q9UKY3 287 aa7.41□□□□□ -1.22
HDAC6-234ENST00000493923 MGAT4AQ9UM21 535 aa7.41□□□□□ -1.22
HDAC6-234ENST00000493923 SAMD4AQ9UPU9 718 aaKnown RBP7.41□□□□□ -1.22
HDAC6-234ENST00000493923 FIS1Q9Y3D6 152 aa7.41□□□□□ -1.22
HDAC6-234ENST00000493923 MED12LQ86YW9 2145 aa7.4□□□□□ -1.22
HDAC6-234ENST00000493923 NAV3Q8IVL0 2385 aa7.4□□□□□ -1.22
HDAC6-234ENST00000493923 A0A0B4J293 547 aa7.4□□□□□ -1.22
HDAC6-234ENST00000493923 ELOVL7A1L3X0 281 aa7.4□□□□□ -1.22
HDAC6-234ENST00000493923 C7orf66A4D0T2 115 aa7.4□□□□□ -1.22
HDAC6-234ENST00000493923 C17orf51A8MQB3 221 aa7.4□□□□□ -1.22
HDAC6-234ENST00000493923 ZNF670-ZNF695F2Z2N8 137 aa7.4□□□□□ -1.22
HDAC6-234ENST00000493923 M0R233 179 aa7.4□□□□□ -1.22
HDAC6-234ENST00000493923 CXCR6O00574 342 aa7.4□□□□□ -1.22
HDAC6-234ENST00000493923 LYRM1O43325 122 aa7.4□□□□□ -1.22
HDAC6-234ENST00000493923 SCN2BO60939 215 aa7.4□□□□□ -1.22
HDAC6-234ENST00000493923 CRCPO75575 148 aa7.4□□□□□ -1.22
HDAC6-234ENST00000493923 CLDN9O95484 217 aa7.4□□□□□ -1.22
HDAC6-234ENST00000493923 KLK1P06870 262 aa7.4□□□□□ -1.22
HDAC6-234ENST00000493923 FABP1P07148 127 aa7.4□□□□□ -1.22
HDAC6-234ENST00000493923 FBXO45P0C2W1 286 aa7.4□□□□□ -1.22
HDAC6-234ENST00000493923 NR2F6P10588 404 aa7.4□□□□□ -1.22
HDAC6-234ENST00000493923 PSMA1P25786 263 aaKnown RBP7.4□□□□□ -1.22
HDAC6-234ENST00000493923 MAGEA2P43356 314 aa7.4□□□□□ -1.22
HDAC6-234ENST00000493923 VEGFCP49767 419 aa7.4□□□□□ -1.22
HDAC6-234ENST00000493923 HTR6P50406 440 aa7.4□□□□□ -1.22
HDAC6-234ENST00000493923 ARHGDIBP52566 201 aa7.4□□□□□ -1.22
HDAC6-234ENST00000493923 RAG2P55895 527 aa7.4□□□□□ -1.22
HDAC6-234ENST00000493923 FBXW4P57775 412 aa7.4□□□□□ -1.22
HDAC6-234ENST00000493923 RAB4BP61018 213 aa7.4□□□□□ -1.22
HDAC6-234ENST00000493923 PUDPQ08623 228 aa7.4□□□□□ -1.22
HDAC6-234ENST00000493923 TESK1Q15569 626 aa7.4□□□□□ -1.22
HDAC6-234ENST00000493923 PRSS53Q2L4Q9 553 aa7.4□□□□□ -1.22
HDAC6-234ENST00000493923 HYAL4Q2M3T9 481 aa7.4□□□□□ -1.22
HDAC6-234ENST00000493923 UGT3A2Q3SY77 523 aa7.4□□□□□ -1.22
HDAC6-234ENST00000493923 GTDC1Q4AE62 458 aa7.4□□□□□ -1.22
HDAC6-234ENST00000493923 ATP6AP1LQ52LC2 224 aa7.4□□□□□ -1.22
HDAC6-234ENST00000493923 RABL3Q5HYI8 236 aa7.4□□□□□ -1.22
HDAC6-234ENST00000493923 ZNF678Q5SXM1 525 aa7.4□□□□□ -1.22
HDAC6-234ENST00000493923 DCST1Q5T197 706 aa7.4□□□□□ -1.22
HDAC6-234ENST00000493923 C10orf62Q5T681 223 aaPredicted RBP7.4□□□□□ -1.22
HDAC6-234ENST00000493923 ERICH5Q6P6B1 374 aa7.4□□□□□ -1.22
HDAC6-234ENST00000493923 LRFN4Q6PJG9 635 aa7.4□□□□□ -1.22
HDAC6-234ENST00000493923 OPN5Q6U736 354 aa7.4□□□□□ -1.22
HDAC6-234ENST00000493923 TMEM107Q6UX40 140 aa7.4□□□□□ -1.22
HDAC6-234ENST00000493923 RASSF6Q6ZTQ3 369 aa7.4□□□□□ -1.22
HDAC6-234ENST00000493923 IKBIPQ70UQ0 350 aa7.4□□□□□ -1.22
HDAC6-234ENST00000493923 RNF113BQ8IZP6 322 aaKnown RBP7.4□□□□□ -1.22
HDAC6-234ENST00000493923 ZNF615Q8N8J6 731 aa7.4□□□□□ -1.22
HDAC6-234ENST00000493923 OR5L2Q8NGL0 311 aa7.4□□□□□ -1.22
HDAC6-234ENST00000493923 OR4A15Q8NGL6 344 aa7.4□□□□□ -1.22
HDAC6-234ENST00000493923 GPR151Q8TDV0 419 aa7.4□□□□□ -1.22
HDAC6-234ENST00000493923 CA5BP1Q8WTZ4 195 aa7.4□□□□□ -1.22
HDAC6-234ENST00000493923 ADIPOR1Q96A54 375 aa7.4□□□□□ -1.22
HDAC6-234ENST00000493923 NTNG2Q96CW9 530 aa7.4□□□□□ -1.22
HDAC6-234ENST00000493923 HRASLS5Q96KN8 279 aa7.4□□□□□ -1.22
HDAC6-234ENST00000493923 KCNS3Q9BQ31 491 aa7.4□□□□□ -1.22
HDAC6-234ENST00000493923 ASPNQ9BXN1 380 aa7.4□□□□□ -1.22
HDAC6-234ENST00000493923 BEX2Q9BXY8 128 aa7.4□□□□□ -1.22
HDAC6-234ENST00000493923 PRRG3Q9BZD7 231 aa7.4□□□□□ -1.22
HDAC6-234ENST00000493923 OR51E2Q9H255 320 aa7.4□□□□□ -1.22
HDAC6-234ENST00000493923 ZNF703Q9H7S9 590 aaPredicted RBP7.4□□□□□ -1.22
HDAC6-234ENST00000493923 EQTNQ9NQ60 294 aa7.4□□□□□ -1.22
HDAC6-234ENST00000493923 RASSF1Q9NS23 344 aa7.4□□□□□ -1.22
HDAC6-234ENST00000493923 DCAF13Q9NV06 445 aaKnown RBP7.4□□□□□ -1.22
HDAC6-234ENST00000493923 COPS7AQ9UBW8 275 aa7.4□□□□□ -1.22
HDAC6-234ENST00000493923 CYB5R1Q9UHQ9 305 aa7.4□□□□□ -1.22
HDAC6-234ENST00000493923 SCP2D1Q9UJQ7 156 aa7.4□□□□□ -1.22
HDAC6-234ENST00000493923 PURGQ9UJV8 347 aaKnown RBP7.4□□□□□ -1.22
HDAC6-234ENST00000493923 SSR3Q9UNL2 185 aa7.4□□□□□ -1.22
HDAC6-234ENST00000493923 MAGED1Q9Y5V3 778 aaPredicted RBP7.4□□□□□ -1.22
HDAC6-234ENST00000493923 FLNAP21333 2647 aaKnown RBP7.4□□□□□ -1.23
HDAC6-234ENST00000493923 PRR14LQ5THK1 2151 aa7.39□□□□□ -1.23
HDAC6-234ENST00000493923 A0A0G2JPF8 293 aa7.39□□□□□ -1.23
HDAC6-234ENST00000493923 HNRNPCL3B7ZW38 293 aa7.39□□□□□ -1.23
HDAC6-234ENST00000493923 E9PQ18 207 aa7.39□□□□□ -1.23
HDAC6-234ENST00000493923 AIPO00170 330 aa7.39□□□□□ -1.23
HDAC6-234ENST00000493923 FOXE1O00358 373 aaPredicted RBP7.39□□□□□ -1.23
HDAC6-234ENST00000493923 AQP7O14520 342 aa7.39□□□□□ -1.23
HDAC6-234ENST00000493923 FABP7O15540 132 aa7.39□□□□□ -1.23
HDAC6-234ENST00000493923 OR10H2O60403 315 aa7.39□□□□□ -1.23
HDAC6-234ENST00000493923 PEX14O75381 377 aa7.39□□□□□ -1.23
HDAC6-234ENST00000493923 PDYNP01213 254 aa7.39□□□□□ -1.23
HDAC6-234ENST00000493923 MT-ND1P03886 318 aa7.39□□□□□ -1.23
HDAC6-234ENST00000493923 P04436 131 aa7.39□□□□□ -1.23
HDAC6-234ENST00000493923 SLC35E2P0CK97 266 aa7.39□□□□□ -1.23
HDAC6-234ENST00000493923 HNRNPCL4P0DMR1 293 aa7.39□□□□□ -1.23
HDAC6-234ENST00000493923 SLC2A2P11168 524 aaPredicted RBP7.39□□□□□ -1.23
HDAC6-234ENST00000493923 PIPP12273 146 aaPredicted RBP7.39□□□□□ -1.23
HDAC6-234ENST00000493923 MSX1P28360 303 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms