RNA–Protein interactions for RNA: ENST00000493177.1

MSH6-208, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 813 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-208ENST00000493177 RPL13AP3Q6NVV1 102 aa11.96□□□□□ -0.49
MSH6-208ENST00000493177 PLXDC2Q6UX71 529 aa11.96□□□□□ -0.49
MSH6-208ENST00000493177 FCRLAQ7L513 359 aa11.96□□□□□ -0.49
MSH6-208ENST00000493177 GPAT4Q86UL3 456 aa11.96□□□□□ -0.49
MSH6-208ENST00000493177 IGFN1Q86VF2 1251 aa11.96□□□□□ -0.49
MSH6-208ENST00000493177 KIF18BQ86Y91 864 aa11.96□□□□□ -0.49
MSH6-208ENST00000493177 CCDC103Q8IW40 242 aa11.96□□□□□ -0.49
MSH6-208ENST00000493177 KDM8Q8N371 416 aa11.96□□□□□ -0.49
MSH6-208ENST00000493177 ZPLD1Q8TCW7 415 aa11.96□□□□□ -0.49
MSH6-208ENST00000493177 TACO1Q9BSH4 297 aaKnown RBP11.96□□□□□ -0.49
MSH6-208ENST00000493177 TSSK6Q9BXA6 273 aa11.96□□□□□ -0.49
MSH6-208ENST00000493177 ENKD1Q9H0I2 346 aa11.96□□□□□ -0.49
MSH6-208ENST00000493177 SLC24A3Q9HC58 644 aa11.96□□□□□ -0.49
MSH6-208ENST00000493177 MCCC2Q9HCC0 563 aa11.96□□□□□ -0.49
MSH6-208ENST00000493177 SMPD3Q9NY59 655 aaPredicted RBP11.96□□□□□ -0.49
MSH6-208ENST00000493177 REV1Q9UBZ9 1251 aa11.96□□□□□ -0.49
MSH6-208ENST00000493177 RASD1Q9Y272 281 aa11.96□□□□□ -0.49
MSH6-208ENST00000493177 HIF3AQ9Y2N7 669 aa11.96□□□□□ -0.49
MSH6-208ENST00000493177 DOCK7Q96N67 2140 aa11.95□□□□□ -0.5
MSH6-208ENST00000493177 SLC22A20A6NK97 555 aa11.95□□□□□ -0.5
MSH6-208ENST00000493177 ZNF814B7Z6K7 855 aa11.95□□□□□ -0.5
MSH6-208ENST00000493177 SNAP29O95721 258 aa11.95□□□□□ -0.5
MSH6-208ENST00000493177 PLGP00747 810 aaPredicted RBP11.95□□□□□ -0.5
MSH6-208ENST00000493177 F13BP05160 661 aa11.95□□□□□ -0.5
MSH6-208ENST00000493177 TIMP3P35625 211 aa11.95□□□□□ -0.5
MSH6-208ENST00000493177 CRISP1P54107 249 aa11.95□□□□□ -0.5
MSH6-208ENST00000493177 CTXN1P60606 82 aa11.95□□□□□ -0.5
MSH6-208ENST00000493177 NSUN5P2Q63ZY6 315 aa11.95□□□□□ -0.5
MSH6-208ENST00000493177 IZUMO2Q6UXV1 221 aa11.95□□□□□ -0.5
MSH6-208ENST00000493177 TMEM200AQ86VY9 491 aa11.95□□□□□ -0.5
MSH6-208ENST00000493177 UEVLDQ8IX04 471 aa11.95□□□□□ -0.5
MSH6-208ENST00000493177 PARP8Q8N3A8 854 aa11.95□□□□□ -0.5
MSH6-208ENST00000493177 CLDN22Q8N7P3 220 aa11.95□□□□□ -0.5
MSH6-208ENST00000493177 ADPRHL1Q8NDY3 354 aa11.95□□□□□ -0.5
MSH6-208ENST00000493177 FNDC9Q8TBE3 224 aa11.95□□□□□ -0.5
MSH6-208ENST00000493177 ZNF570Q96NI8 536 aa11.95□□□□□ -0.5
MSH6-208ENST00000493177 IFT27Q9BW83 186 aa11.95□□□□□ -0.5
MSH6-208ENST00000493177 PLA2G12AQ9BZM1 189 aa11.95□□□□□ -0.5
MSH6-208ENST00000493177 TOR3AQ9H497 397 aa11.95□□□□□ -0.5
MSH6-208ENST00000493177 INIPQ9NRY2 104 aa11.95□□□□□ -0.5
MSH6-208ENST00000493177 TAS2R5Q9NYW4 299 aa11.95□□□□□ -0.5
MSH6-208ENST00000493177 INTS1Q8N201 2190 aaKnown RBP11.95□□□□□ -0.5
MSH6-208ENST00000493177 A0A1W2PRG6 482 aa11.94□□□□□ -0.5
MSH6-208ENST00000493177 CD8B2A6NJW9 211 aa11.94□□□□□ -0.5
MSH6-208ENST00000493177 EEF1E1-BLOC1S5C9J1V9 151 aa11.94□□□□□ -0.5
MSH6-208ENST00000493177 MS4A18H0YCH9 400 aa11.94□□□□□ -0.5
MSH6-208ENST00000493177 EEF1E1O43324 174 aaKnown RBP11.94□□□□□ -0.5
MSH6-208ENST00000493177 RAMP1O60894 148 aa11.94□□□□□ -0.5
MSH6-208ENST00000493177 FZD7O75084 574 aa11.94□□□□□ -0.5
MSH6-208ENST00000493177 VAMP5O95183 116 aa11.94□□□□□ -0.5
MSH6-208ENST00000493177 PPP1R3DO95685 299 aa11.94□□□□□ -0.5
MSH6-208ENST00000493177 TP53P04637 393 aaPredicted RBP11.94□□□□□ -0.5
MSH6-208ENST00000493177 TMIGD3P0DMS9 266 aaPredicted RBP11.94□□□□□ -0.5
MSH6-208ENST00000493177 ZNF43P17038 809 aa11.94□□□□□ -0.5
MSH6-208ENST00000493177 ASCL1P50553 236 aa11.94□□□□□ -0.5
MSH6-208ENST00000493177 P2RY4P51582 365 aa11.94□□□□□ -0.5
MSH6-208ENST00000493177 AQP4P55087 323 aa11.94□□□□□ -0.5
MSH6-208ENST00000493177 ESRRGP62508 458 aa11.94□□□□□ -0.5
MSH6-208ENST00000493177 RPS4XP62701 263 aaKnown RBP11.94□□□□□ -0.5
MSH6-208ENST00000493177 ERVK-25P63136 954 aa11.94□□□□□ -0.5
MSH6-208ENST00000493177 POU3F1Q03052 451 aaPredicted RBP11.94□□□□□ -0.5
MSH6-208ENST00000493177 RASGEF1BQ0VAM2 473 aa11.94□□□□□ -0.5
MSH6-208ENST00000493177 ZP4Q12836 540 aa11.94□□□□□ -0.5
MSH6-208ENST00000493177 NPRL3Q12980 569 aa11.94□□□□□ -0.5
MSH6-208ENST00000493177 TOP3AQ13472 1001 aaPredicted RBP11.94□□□□□ -0.5
MSH6-208ENST00000493177 FHL1Q13642 323 aa11.94□□□□□ -0.5
MSH6-208ENST00000493177 MS4A18Q3C1V0 323 aa11.94□□□□□ -0.5
MSH6-208ENST00000493177 EEF1A1P5Q5VTE0 462 aa11.94□□□□□ -0.5
MSH6-208ENST00000493177 THSD4Q6ZMP0 1018 aa11.94□□□□□ -0.5
MSH6-208ENST00000493177 SEM1Q6ZVN7 128 aa11.94□□□□□ -0.5
MSH6-208ENST00000493177 LIX1LQ8IVB5 337 aa11.94□□□□□ -0.5
MSH6-208ENST00000493177 IQCF1Q8N6M8 205 aa11.94□□□□□ -0.5
MSH6-208ENST00000493177 ZNF555Q8NEP9 628 aa11.94□□□□□ -0.5
MSH6-208ENST00000493177 ANKK1Q8NFD2 765 aa11.94□□□□□ -0.5
MSH6-208ENST00000493177 CYGBQ8WWM9 190 aa11.94□□□□□ -0.5
MSH6-208ENST00000493177 C14orf79Q96F83 325 aa11.94□□□□□ -0.5
MSH6-208ENST00000493177 RDH12Q96NR8 316 aa11.94□□□□□ -0.5
MSH6-208ENST00000493177 OXGR1Q96P68 337 aa11.94□□□□□ -0.5
MSH6-208ENST00000493177 GABARAPL3Q9BY60 117 aa11.94□□□□□ -0.5
MSH6-208ENST00000493177 POLDIP3Q9BY77 421 aaKnown RBP11.94□□□□□ -0.5
MSH6-208ENST00000493177 CALHM2Q9HA72 323 aa11.94□□□□□ -0.5
MSH6-208ENST00000493177 NPDC1Q9NQX5 325 aaPredicted RBP11.94□□□□□ -0.5
MSH6-208ENST00000493177 IL20Q9NYY1 176 aa11.94□□□□□ -0.5
MSH6-208ENST00000493177 ZNF175Q9Y473 711 aa11.94□□□□□ -0.5
MSH6-208ENST00000493177 A0A1W2PNV4 684 aa11.93□□□□□ -0.5
MSH6-208ENST00000493177 MBD3L4A6NDZ8 208 aaPredicted RBP11.93□□□□□ -0.5
MSH6-208ENST00000493177 MBD3L3A6NE82 208 aaPredicted RBP11.93□□□□□ -0.5
MSH6-208ENST00000493177 MBD3L5A6NJ08 208 aaPredicted RBP11.93□□□□□ -0.5
MSH6-208ENST00000493177 KDM4EB2RXH2 506 aaPredicted RBP11.93□□□□□ -0.5
MSH6-208ENST00000493177 MCIDASD6RGH6 385 aa11.93□□□□□ -0.5
MSH6-208ENST00000493177 CYTIPO60759 359 aa11.93□□□□□ -0.5
MSH6-208ENST00000493177 AQP8O94778 261 aa11.93□□□□□ -0.5
MSH6-208ENST00000493177 FCGR2AP12318 317 aa11.93□□□□□ -0.5
MSH6-208ENST00000493177 CTSSP25774 331 aa11.93□□□□□ -0.5
MSH6-208ENST00000493177 NOS3P29474 1203 aa11.93□□□□□ -0.5
MSH6-208ENST00000493177 OPRM1P35372 400 aa11.93□□□□□ -0.5
MSH6-208ENST00000493177 POLR2IP36954 125 aaKnown RBP11.93□□□□□ -0.5
MSH6-208ENST00000493177 RPS6KA3P51812 740 aa11.93□□□□□ -0.5
MSH6-208ENST00000493177 FXYD6P3P58550 94 aa11.93□□□□□ -0.5
MSH6-208ENST00000493177 H3F3AP84243 136 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms