RNA–Protein interactions for RNA: ENST00000493030.6

TRIM11-204, Transcript of tripartite motif containing 11, humanhuman

TSL 1 (best) BASIC

Gene TRIM11, Length 5,774 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11-204ENST00000493030 GIMAP1Q8WWP7 306 aa12.59□□□□□ -0.39
TRIM11-204ENST00000493030 H1FXQ92522 213 aaKnown RBP12.59□□□□□ -0.39
TRIM11-204ENST00000493030 ELP4Q96EB1 424 aa12.59□□□□□ -0.39
TRIM11-204ENST00000493030 ZNF486Q96H40 463 aaPredicted RBP12.59□□□□□ -0.39
TRIM11-204ENST00000493030 ZC3HAV1LQ96H79 300 aaKnown RBP12.59□□□□□ -0.39
TRIM11-204ENST00000493030 ASB16Q96NS5 453 aa12.59□□□□□ -0.39
TRIM11-204ENST00000493030 DECR2Q9NUI1 292 aa12.59□□□□□ -0.39
TRIM11-204ENST00000493030 IGLV3-10A0A075B6K4 115 aa12.59□□□□□ -0.39
TRIM11-204ENST00000493030 EDIL3O43854 480 aa12.59□□□□□ -0.39
TRIM11-204ENST00000493030 EIF1BO60739 113 aaKnown RBP12.59□□□□□ -0.39
TRIM11-204ENST00000493030 SNCAP37840 140 aa12.59□□□□□ -0.39
TRIM11-204ENST00000493030 IDO2Q6ZQW0 420 aa12.59□□□□□ -0.39
TRIM11-204ENST00000493030 ZNF546Q86UE3 836 aa12.59□□□□□ -0.39
TRIM11-204ENST00000493030 SUMF2Q8NBJ7 301 aa12.59□□□□□ -0.39
TRIM11-204ENST00000493030 TMEM174Q8WUU8 243 aa12.59□□□□□ -0.39
TRIM11-204ENST00000493030 A4GALTQ9NPC4 353 aa12.59□□□□□ -0.39
TRIM11-204ENST00000493030 NRIP3Q9NQ35 241 aa12.59□□□□□ -0.39
TRIM11-204ENST00000493030 NXPH2O95156 264 aa12.58□□□□□ -0.39
TRIM11-204ENST00000493030 CHATP28329 748 aa12.58□□□□□ -0.39
TRIM11-204ENST00000493030 TSFMP43897 325 aaKnown RBP12.58□□□□□ -0.39
TRIM11-204ENST00000493030 ZNF836Q6ZNA1 936 aa12.58□□□□□ -0.39
TRIM11-204ENST00000493030 PRICKLE2Q7Z3G6 844 aa12.58□□□□□ -0.39
TRIM11-204ENST00000493030 UPRTQ96BW1 309 aa12.58□□□□□ -0.39
TRIM11-204ENST00000493030 RASD2Q96D21 266 aa12.58□□□□□ -0.39
TRIM11-204ENST00000493030 C19orf12Q9NSK7 152 aa12.58□□□□□ -0.39
TRIM11-204ENST00000493030 GFOD1Q9NXC2 390 aa12.58□□□□□ -0.39
TRIM11-204ENST00000493030 KIF25Q9UIL4 384 aa12.58□□□□□ -0.39
TRIM11-204ENST00000493030 CRYZL1O95825 349 aa12.58□□□□□ -0.4
TRIM11-204ENST00000493030 EIF1P41567 113 aaKnown RBP12.58□□□□□ -0.4
TRIM11-204ENST00000493030 SSX2Q16385 188 aa12.58□□□□□ -0.4
TRIM11-204ENST00000493030 NXNL2Q5VZ03 156 aa12.58□□□□□ -0.4
TRIM11-204ENST00000493030 KIR3DX1Q9H7L2 352 aa12.58□□□□□ -0.4
TRIM11-204ENST00000493030 GALNT9Q9HCQ5 603 aa12.58□□□□□ -0.4
TRIM11-204ENST00000493030 ZNF225Q9UK10 706 aa12.58□□□□□ -0.4
TRIM11-204ENST00000493030 PRAMEF25A6NGN4 478 aa12.58□□□□□ -0.4
TRIM11-204ENST00000493030 CLDN24A6NM45 220 aa12.58□□□□□ -0.4
TRIM11-204ENST00000493030 FAM166BA8MTA8 275 aa12.58□□□□□ -0.4
TRIM11-204ENST00000493030 RNF212BA8MTL3 300 aa12.58□□□□□ -0.4
TRIM11-204ENST00000493030 HMGA1P17096 107 aaKnown RBP12.58□□□□□ -0.4
TRIM11-204ENST00000493030 CD1CP29017 333 aa12.58□□□□□ -0.4
TRIM11-204ENST00000493030 EDDM3BP56851 147 aa12.58□□□□□ -0.4
TRIM11-204ENST00000493030 MEP1BQ16820 701 aa12.58□□□□□ -0.4
TRIM11-204ENST00000493030 HENMT1Q5T8I9 393 aaKnown RBP12.58□□□□□ -0.4
TRIM11-204ENST00000493030 KDM8Q8N371 416 aa12.58□□□□□ -0.4
TRIM11-204ENST00000493030 NIPSNAP1Q9BPW8 284 aa12.58□□□□□ -0.4
TRIM11-204ENST00000493030 HIPK2Q9H2X6 1198 aa12.58□□□□□ -0.4
TRIM11-204ENST00000493030 COL16A1Q07092 1604 aaPredicted RBP12.58□□□□□ -0.4
TRIM11-204ENST00000493030 TMEM82A0PJX8 343 aa12.58□□□□□ -0.4
TRIM11-204ENST00000493030 GMDSO60547 372 aa12.58□□□□□ -0.4
TRIM11-204ENST00000493030 NKX6-1P78426 367 aaPredicted RBP12.58□□□□□ -0.4
TRIM11-204ENST00000493030 Q499Y3 187 aa12.58□□□□□ -0.4
TRIM11-204ENST00000493030 OR7G1Q8NGA0 311 aa12.58□□□□□ -0.4
TRIM11-204ENST00000493030 NKX3-1Q99801 234 aaPredicted RBP12.58□□□□□ -0.4
TRIM11-204ENST00000493030 TBC1D29Q9UFV1 150 aa12.58□□□□□ -0.4
TRIM11-204ENST00000493030 USP54Q70EL1 1684 aa12.58□□□□□ -0.4
TRIM11-204ENST00000493030 NUP98P52948 1817 aa12.58□□□□□ -0.4
TRIM11-204ENST00000493030 MYH7BA7E2Y1 1941 aa12.58□□□□□ -0.4
TRIM11-204ENST00000493030 OR5K3A6NET4 321 aa12.58□□□□□ -0.4
TRIM11-204ENST00000493030 PLPP1O14494 284 aa12.58□□□□□ -0.4
TRIM11-204ENST00000493030 CST9LP1Q5W188 147 aa12.58□□□□□ -0.4
TRIM11-204ENST00000493030 DPY19L2P2Q6ZN68 376 aa12.58□□□□□ -0.4
TRIM11-204ENST00000493030 ZNF454Q8N9F8 522 aa12.58□□□□□ -0.4
TRIM11-204ENST00000493030 ABHD4Q8TB40 342 aa12.58□□□□□ -0.4
TRIM11-204ENST00000493030 CHTF18Q8WVB6 975 aa12.58□□□□□ -0.4
TRIM11-204ENST00000493030 PIGTQ969N2 578 aa12.58□□□□□ -0.4
TRIM11-204ENST00000493030 THOC3Q96J01 351 aaKnown RBP12.58□□□□□ -0.4
TRIM11-204ENST00000493030 OBP2AQ9NY56 170 aa12.58□□□□□ -0.4
TRIM11-204ENST00000493030 CORINQ9Y5Q5 1042 aa12.58□□□□□ -0.4
TRIM11-204ENST00000493030 HOXA1P49639 335 aaPredicted RBP12.57□□□□□ -0.4
TRIM11-204ENST00000493030 PLK5Q496M5 336 aa12.57□□□□□ -0.4
TRIM11-204ENST00000493030 HACD4Q5VWC8 232 aa12.57□□□□□ -0.4
TRIM11-204ENST00000493030 METRNLQ641Q3 311 aa12.57□□□□□ -0.4
TRIM11-204ENST00000493030 TMEM71Q6P5X7 295 aa12.57□□□□□ -0.4
TRIM11-204ENST00000493030 ZADH2Q8N4Q0 377 aa12.57□□□□□ -0.4
TRIM11-204ENST00000493030 SIRT6Q8N6T7 355 aa12.57□□□□□ -0.4
TRIM11-204ENST00000493030 GOT1L1Q8NHS2 421 aaPredicted RBP12.57□□□□□ -0.4
TRIM11-204ENST00000493030 LIN37Q96GY3 246 aaPredicted RBP12.57□□□□□ -0.4
TRIM11-204ENST00000493030 MSTNO14793 375 aa12.57□□□□□ -0.4
TRIM11-204ENST00000493030 ZNF77Q15935 545 aa12.57□□□□□ -0.4
TRIM11-204ENST00000493030 SHEQ5VZ18 495 aa12.57□□□□□ -0.4
TRIM11-204ENST00000493030 LAX1Q8IWV1 398 aa12.57□□□□□ -0.4
TRIM11-204ENST00000493030 FGGYQ96C11 551 aa12.57□□□□□ -0.4
TRIM11-204ENST00000493030 DAZAP1Q96EP5 407 aaKnown RBP12.57□□□□□ -0.4
TRIM11-204ENST00000493030 ZNF419Q96HQ0 510 aaPredicted RBP12.57□□□□□ -0.4
TRIM11-204ENST00000493030 FOXQ1Q9C009 403 aa12.57□□□□□ -0.4
TRIM11-204ENST00000493030 AMBRA1Q9C0C7 1298 aa12.57□□□□□ -0.4
TRIM11-204ENST00000493030 SLC22A23A1A5C7 686 aa12.57□□□□□ -0.4
TRIM11-204ENST00000493030 A8MVM7 634 aa12.57□□□□□ -0.4
TRIM11-204ENST00000493030 ZNF705FA8MVS1 300 aaPredicted RBP12.57□□□□□ -0.4
TRIM11-204ENST00000493030 ZNF705DP0CH99 300 aaPredicted RBP12.57□□□□□ -0.4
TRIM11-204ENST00000493030 ZNF705BP0CI00 300 aaPredicted RBP12.57□□□□□ -0.4
TRIM11-204ENST00000493030 RELAQ04206 551 aa12.57□□□□□ -0.4
TRIM11-204ENST00000493030 Q6ZTK2 550 aa12.57□□□□□ -0.4
TRIM11-204ENST00000493030 SYT9Q86SS6 491 aa12.57□□□□□ -0.4
TRIM11-204ENST00000493030 RDH10Q8IZV5 341 aa12.57□□□□□ -0.4
TRIM11-204ENST00000493030 BHLHE23Q8NDY6 225 aa12.57□□□□□ -0.4
TRIM11-204ENST00000493030 KCNG3Q8TAE7 436 aa12.57□□□□□ -0.4
TRIM11-204ENST00000493030 CCDC74AQ96AQ1 378 aa12.57□□□□□ -0.4
TRIM11-204ENST00000493030 ELSPBP1Q96BH3 223 aa12.57□□□□□ -0.4
TRIM11-204ENST00000493030 RBMXL1Q96E39 390 aaKnown RBP12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms