RNA–Protein interactions for RNA: ENST00000492977.5

PTPN7-216, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 1,595 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-216ENST00000492977 A0A1W2PRG6 482 aa12.66□□□□□ -0.38
PTPN7-216ENST00000492977 PMS2P1A4D2B8 440 aa12.66□□□□□ -0.38
PTPN7-216ENST00000492977 C4orf47A7E2U8 309 aa12.66□□□□□ -0.38
PTPN7-216ENST00000492977 GABRPO00591 440 aa12.66□□□□□ -0.38
PTPN7-216ENST00000492977 ARHGEF9O43307 516 aa12.66□□□□□ -0.38
PTPN7-216ENST00000492977 RGS9O75916 674 aaPredicted RBP12.66□□□□□ -0.38
PTPN7-216ENST00000492977 ZNF12P17014 697 aa12.66□□□□□ -0.38
PTPN7-216ENST00000492977 AHCYP23526 432 aa12.66□□□□□ -0.38
PTPN7-216ENST00000492977 F8A1P23610 371 aa12.66□□□□□ -0.38
PTPN7-216ENST00000492977 ADH6P28332 368 aa12.66□□□□□ -0.38
PTPN7-216ENST00000492977 CD40LGP29965 261 aa12.66□□□□□ -0.38
PTPN7-216ENST00000492977 OTX2P32243 289 aa12.66□□□□□ -0.38
PTPN7-216ENST00000492977 PYCR1P32322 319 aa12.66□□□□□ -0.38
PTPN7-216ENST00000492977 SDC2P34741 201 aa12.66□□□□□ -0.38
PTPN7-216ENST00000492977 EIF1P41567 113 aaKnown RBP12.66□□□□□ -0.38
PTPN7-216ENST00000492977 PPP5CP53041 499 aa12.66□□□□□ -0.38
PTPN7-216ENST00000492977 HCCSP53701 268 aa12.66□□□□□ -0.38
PTPN7-216ENST00000492977 ZNF45Q02386 682 aa12.66□□□□□ -0.38
PTPN7-216ENST00000492977 RUNX1T1Q06455 604 aa12.66□□□□□ -0.38
PTPN7-216ENST00000492977 SPEM2Q0P670 501 aa12.66□□□□□ -0.38
PTPN7-216ENST00000492977 CHAF1BQ13112 559 aa12.66□□□□□ -0.38
PTPN7-216ENST00000492977 ACKR1Q16570 336 aa12.66□□□□□ -0.38
PTPN7-216ENST00000492977 EEF1A1P5Q5VTE0 462 aa12.66□□□□□ -0.38
PTPN7-216ENST00000492977 H1FNTQ75WM6 255 aaPredicted RBP12.66□□□□□ -0.38
PTPN7-216ENST00000492977 SSX6Q7RTT6 188 aa12.66□□□□□ -0.38
PTPN7-216ENST00000492977 WDSUB1Q8N9V3 476 aa12.66□□□□□ -0.38
PTPN7-216ENST00000492977 OR4K17Q8NGC6 315 aa12.66□□□□□ -0.38
PTPN7-216ENST00000492977 ZNF519Q8TB69 540 aa12.66□□□□□ -0.38
PTPN7-216ENST00000492977 FNDC8Q8TC99 324 aa12.66□□□□□ -0.38
PTPN7-216ENST00000492977 SNX33Q8WV41 574 aa12.66□□□□□ -0.38
PTPN7-216ENST00000492977 THAP4Q8WY91 577 aa12.66□□□□□ -0.38
PTPN7-216ENST00000492977 NTNG2Q96CW9 530 aa12.66□□□□□ -0.38
PTPN7-216ENST00000492977 NXPE2Q96DL1 559 aa12.66□□□□□ -0.38
PTPN7-216ENST00000492977 DNAJA3Q96EY1 480 aa12.66□□□□□ -0.38
PTPN7-216ENST00000492977 HDHD5Q9BXW7 423 aa12.66□□□□□ -0.38
PTPN7-216ENST00000492977 ANGPTL4Q9BY76 406 aa12.66□□□□□ -0.38
PTPN7-216ENST00000492977 BARHL1Q9BZE3 327 aa12.66□□□□□ -0.38
PTPN7-216ENST00000492977 KCNN2Q9H2S1 579 aa12.66□□□□□ -0.38
PTPN7-216ENST00000492977 RERGLQ9H628 205 aa12.66□□□□□ -0.38
PTPN7-216ENST00000492977 SRA1Q9HD15 236 aaKnown RBP12.66□□□□□ -0.38
PTPN7-216ENST00000492977 SH2D2AQ9NP31 389 aa12.66□□□□□ -0.38
PTPN7-216ENST00000492977 NCDNQ9UBB6 729 aa12.66□□□□□ -0.38
PTPN7-216ENST00000492977 HRH3Q9Y5N1 445 aa12.66□□□□□ -0.38
PTPN7-216ENST00000492977 CPAMD8Q8IZJ3 1885 aa12.66□□□□□ -0.38
PTPN7-216ENST00000492977 A0A087WZY1 265 aa12.65□□□□□ -0.38
PTPN7-216ENST00000492977 IQCMA0A1B0GVH7 501 aa12.65□□□□□ -0.38
PTPN7-216ENST00000492977 NPIPB13A6NJU9 1138 aa12.65□□□□□ -0.38
PTPN7-216ENST00000492977 NPIPB4C9JG80 1138 aa12.65□□□□□ -0.38
PTPN7-216ENST00000492977 E9PI62 339 aa12.65□□□□□ -0.38
PTPN7-216ENST00000492977 LRRTM2O43300 516 aa12.65□□□□□ -0.38
PTPN7-216ENST00000492977 SELENOFO60613 162 aa12.65□□□□□ -0.38
PTPN7-216ENST00000492977 FZD7O75084 574 aa12.65□□□□□ -0.38
PTPN7-216ENST00000492977 CD1AP06126 327 aa12.65□□□□□ -0.38
PTPN7-216ENST00000492977 TFPIP10646 304 aa12.65□□□□□ -0.38
PTPN7-216ENST00000492977 GTF2E2P29084 291 aaKnown RBP12.65□□□□□ -0.38
PTPN7-216ENST00000492977 ACVR1BP36896 505 aa12.65□□□□□ -0.38
PTPN7-216ENST00000492977 ETV6P41212 452 aa12.65□□□□□ -0.38
PTPN7-216ENST00000492977 CENPAP49450 140 aa12.65□□□□□ -0.38
PTPN7-216ENST00000492977 GBX2P52951 348 aaPredicted RBP12.65□□□□□ -0.38
PTPN7-216ENST00000492977 CLDN6P56747 220 aa12.65□□□□□ -0.38
PTPN7-216ENST00000492977 RPS18P62269 152 aaKnown RBP12.65□□□□□ -0.38
PTPN7-216ENST00000492977 PUDPQ08623 228 aa12.65□□□□□ -0.38
PTPN7-216ENST00000492977 SLC22A10Q63ZE4 541 aa12.65□□□□□ -0.38
PTPN7-216ENST00000492977 DMKNQ6E0U4 476 aaPredicted RBP12.65□□□□□ -0.38
PTPN7-216ENST00000492977 TMEM91Q6ZNR0 172 aa12.65□□□□□ -0.38
PTPN7-216ENST00000492977 KCTD20Q7Z5Y7 419 aa12.65□□□□□ -0.38
PTPN7-216ENST00000492977 MARCH9Q86YJ5 346 aa12.65□□□□□ -0.38
PTPN7-216ENST00000492977 PLCZ1Q86YW0 608 aa12.65□□□□□ -0.38
PTPN7-216ENST00000492977 OR6V1Q8N148 313 aa12.65□□□□□ -0.38
PTPN7-216ENST00000492977 TMEM156Q8N614 296 aa12.65□□□□□ -0.38
PTPN7-216ENST00000492977 POC1BQ8TC44 478 aa12.65□□□□□ -0.38
PTPN7-216ENST00000492977 PAQR8Q8TEZ7 354 aa12.65□□□□□ -0.38
PTPN7-216ENST00000492977 ARL5BQ96KC2 179 aa12.65□□□□□ -0.38
PTPN7-216ENST00000492977 TSSK2Q96PF2 358 aa12.65□□□□□ -0.38
PTPN7-216ENST00000492977 MNTQ99583 582 aa12.65□□□□□ -0.38
PTPN7-216ENST00000492977 KCNS3Q9BQ31 491 aa12.65□□□□□ -0.38
PTPN7-216ENST00000492977 GPR87Q9BY21 358 aa12.65□□□□□ -0.38
PTPN7-216ENST00000492977 TPK1Q9H3S4 243 aa12.65□□□□□ -0.38
PTPN7-216ENST00000492977 VSX1Q9NZR4 365 aaPredicted RBP12.65□□□□□ -0.38
PTPN7-216ENST00000492977 FBXL2Q9UKC9 423 aa12.65□□□□□ -0.38
PTPN7-216ENST00000492977 FKBP7Q9Y680 259 aa12.65□□□□□ -0.38
PTPN7-216ENST00000492977 VPS13AQ96RL7 3174 aa12.65□□□□□ -0.39
PTPN7-216ENST00000492977 A0A1W2PNU3 283 aaPredicted RBP12.64□□□□□ -0.39
PTPN7-216ENST00000492977 PRSS37A4D1T9 235 aa12.64□□□□□ -0.39
PTPN7-216ENST00000492977 LIPT2A6NK58 231 aa12.64□□□□□ -0.39
PTPN7-216ENST00000492977 FAM171A2A8MVW0 826 aa12.64□□□□□ -0.39
PTPN7-216ENST00000492977 C21orf140B9A014 251 aa12.64□□□□□ -0.39
PTPN7-216ENST00000492977 MS4A18H0YCH9 400 aa12.64□□□□□ -0.39
PTPN7-216ENST00000492977 OGG1O15527 345 aa12.64□□□□□ -0.39
PTPN7-216ENST00000492977 EFNA2O43921 213 aa12.64□□□□□ -0.39
PTPN7-216ENST00000492977 BLVRAP53004 296 aa12.64□□□□□ -0.39
PTPN7-216ENST00000492977 OR7A5Q15622 319 aa12.64□□□□□ -0.39
PTPN7-216ENST00000492977 CSRP2Q16527 193 aa12.64□□□□□ -0.39
PTPN7-216ENST00000492977 MS4A18Q3C1V0 323 aa12.64□□□□□ -0.39
PTPN7-216ENST00000492977 CCDC58Q4VC31 144 aa12.64□□□□□ -0.39
PTPN7-216ENST00000492977 TP53I3Q53FA7 332 aa12.64□□□□□ -0.39
PTPN7-216ENST00000492977 H3F3CQ6NXT2 135 aa12.64□□□□□ -0.39
PTPN7-216ENST00000492977 C3orf33Q6P1S2 294 aa12.64□□□□□ -0.39
PTPN7-216ENST00000492977 ARL9Q6T311 187 aa12.64□□□□□ -0.39
PTPN7-216ENST00000492977 BTLAQ7Z6A9 289 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms