RNA–Protein interactions for RNA: ENST00000492883.5

CCM2-217, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-217ENST00000492883 LRMDAQ9H2I8 198 aa12.32□□□□□ -0.44
CCM2-217ENST00000492883 INIPQ9NRY2 104 aa12.32□□□□□ -0.44
CCM2-217ENST00000492883 SLC7A8Q9UHI5 535 aa12.32□□□□□ -0.44
CCM2-217ENST00000492883 TMEM5Q9Y2B1 443 aa12.32□□□□□ -0.44
CCM2-217ENST00000492883 FLNCQ14315 2725 aa12.32□□□□□ -0.44
CCM2-217ENST00000492883 DOPEY2Q9Y3R5 2298 aa12.32□□□□□ -0.44
CCM2-217ENST00000492883 DOCK7Q96N67 2140 aa12.32□□□□□ -0.44
CCM2-217ENST00000492883 A0A1W2PRG6 482 aa12.31□□□□□ -0.44
CCM2-217ENST00000492883 DHRS12A0PJE2 317 aa12.31□□□□□ -0.44
CCM2-217ENST00000492883 SH3PXD2BA1X283 911 aa12.31□□□□□ -0.44
CCM2-217ENST00000492883 A6NNC1 897 aa12.31□□□□□ -0.44
CCM2-217ENST00000492883 ZNF587BE7ETH6 402 aa12.31□□□□□ -0.44
CCM2-217ENST00000492883 TNFRSF11BO00300 401 aa12.31□□□□□ -0.44
CCM2-217ENST00000492883 OR10H3O60404 316 aa12.31□□□□□ -0.44
CCM2-217ENST00000492883 RAD51DO75771 328 aa12.31□□□□□ -0.44
CCM2-217ENST00000492883 BCL10O95999 233 aa12.31□□□□□ -0.44
CCM2-217ENST00000492883 RAP2AP10114 183 aa12.31□□□□□ -0.44
CCM2-217ENST00000492883 MPGP29372 298 aa12.31□□□□□ -0.44
CCM2-217ENST00000492883 MAGEA2P43356 314 aa12.31□□□□□ -0.44
CCM2-217ENST00000492883 SLC9A3P48764 834 aa12.31□□□□□ -0.44
CCM2-217ENST00000492883 FOXG1P55316 489 aaPredicted RBP12.31□□□□□ -0.44
CCM2-217ENST00000492883 BIDP55957 195 aa12.31□□□□□ -0.44
CCM2-217ENST00000492883 TGFBR3Q03167 851 aa12.31□□□□□ -0.44
CCM2-217ENST00000492883 LGALS3BPQ08380 585 aa12.31□□□□□ -0.44
CCM2-217ENST00000492883 CAMK2DQ13557 499 aa12.31□□□□□ -0.44
CCM2-217ENST00000492883 SEC23BQ15437 767 aa12.31□□□□□ -0.44
CCM2-217ENST00000492883 ALG10Q5BKT4 473 aa12.31□□□□□ -0.44
CCM2-217ENST00000492883 HMBOX1Q6NT76 420 aa12.31□□□□□ -0.44
CCM2-217ENST00000492883 C22orf34Q6ZV56 151 aa12.31□□□□□ -0.44
CCM2-217ENST00000492883 TMPRSS11FQ6ZWK6 438 aa12.31□□□□□ -0.44
CCM2-217ENST00000492883 TMEM200AQ86VY9 491 aa12.31□□□□□ -0.44
CCM2-217ENST00000492883 WFDC8Q8IUA0 241 aa12.31□□□□□ -0.44
CCM2-217ENST00000492883 OR6N1Q8NGY5 312 aa12.31□□□□□ -0.44
CCM2-217ENST00000492883 MOSPD2Q8NHP6 518 aa12.31□□□□□ -0.44
CCM2-217ENST00000492883 CANT1Q8WVQ1 401 aa12.31□□□□□ -0.44
CCM2-217ENST00000492883 HSD17B8Q92506 261 aa12.31□□□□□ -0.44
CCM2-217ENST00000492883 MUCL1Q96DR8 90 aa12.31□□□□□ -0.44
CCM2-217ENST00000492883 FAM46AQ96IP4 442 aaKnown RBP12.31□□□□□ -0.44
CCM2-217ENST00000492883 ADAD1Q96M93 576 aaKnown RBP12.31□□□□□ -0.44
CCM2-217ENST00000492883 TNFRSF13CQ96RJ3 184 aa12.31□□□□□ -0.44
CCM2-217ENST00000492883 CHID1Q9BWS9 393 aa12.31□□□□□ -0.44
CCM2-217ENST00000492883 TRAV27A0A087WT01 109 aa12.3□□□□□ -0.44
CCM2-217ENST00000492883 MCIDASD6RGH6 385 aa12.3□□□□□ -0.44
CCM2-217ENST00000492883 M0R3G1 203 aa12.3□□□□□ -0.44
CCM2-217ENST00000492883 PDLIM1O00151 329 aa12.3□□□□□ -0.44
CCM2-217ENST00000492883 CLOCKO15516 846 aa12.3□□□□□ -0.44
CCM2-217ENST00000492883 ITGA5P08648 1049 aa12.3□□□□□ -0.44
CCM2-217ENST00000492883 IFNGR2P38484 337 aa12.3□□□□□ -0.44
CCM2-217ENST00000492883 OMPP47874 163 aa12.3□□□□□ -0.44
CCM2-217ENST00000492883 ERFP50548 548 aa12.3□□□□□ -0.44
CCM2-217ENST00000492883 ROR2Q01974 943 aaKnown RBP12.3□□□□□ -0.44
CCM2-217ENST00000492883 MELKQ14680 651 aa12.3□□□□□ -0.44
CCM2-217ENST00000492883 TAF11Q15544 211 aa12.3□□□□□ -0.44
CCM2-217ENST00000492883 ANKDD1AQ495B1 522 aa12.3□□□□□ -0.44
CCM2-217ENST00000492883 TIMM23BQ5SRD1 257 aa12.3□□□□□ -0.44
CCM2-217ENST00000492883 OR7E24Q6IFN5 339 aa12.3□□□□□ -0.44
CCM2-217ENST00000492883 NHLRC1Q6VVB1 395 aa12.3□□□□□ -0.44
CCM2-217ENST00000492883 C20orf196Q8IYI0 205 aa12.3□□□□□ -0.44
CCM2-217ENST00000492883 ADGRG5Q8IZF4 528 aa12.3□□□□□ -0.44
CCM2-217ENST00000492883 TMEM123Q8N131 208 aa12.3□□□□□ -0.44
CCM2-217ENST00000492883 OR13C2Q8NGS9 318 aa12.3□□□□□ -0.44
CCM2-217ENST00000492883 OR6X1Q8NH79 312 aa12.3□□□□□ -0.44
CCM2-217ENST00000492883 MUS81Q96NY9 551 aa12.3□□□□□ -0.44
CCM2-217ENST00000492883 ALKBH3Q96Q83 286 aaPredicted RBP12.3□□□□□ -0.44
CCM2-217ENST00000492883 B3GAT2Q9NPZ5 323 aa12.3□□□□□ -0.44
CCM2-217ENST00000492883 HIF3AQ9Y2N7 669 aa12.3□□□□□ -0.44
CCM2-217ENST00000492883 ICE1Q9Y2F5 2266 aa12.29□□□□□ -0.44
CCM2-217ENST00000492883 OR5H1A6NKK0 313 aa12.29□□□□□ -0.44
CCM2-217ENST00000492883 CDC42EP2O14613 210 aa12.29□□□□□ -0.44
CCM2-217ENST00000492883 CTAG2O75638 210 aa12.29□□□□□ -0.44
CCM2-217ENST00000492883 THBDP07204 575 aa12.29□□□□□ -0.44
CCM2-217ENST00000492883 TSPAN19P0C672 248 aa12.29□□□□□ -0.44
CCM2-217ENST00000492883 HOXB6P17509 224 aaKnown RBP12.29□□□□□ -0.44
CCM2-217ENST00000492883 CRYGSP22914 178 aa12.29□□□□□ -0.44
CCM2-217ENST00000492883 RPL4P36578 427 aaKnown RBP12.29□□□□□ -0.44
CCM2-217ENST00000492883 DAP3P51398 398 aaKnown RBP12.29□□□□□ -0.44
CCM2-217ENST00000492883 HMGA2P52926 109 aa12.29□□□□□ -0.44
CCM2-217ENST00000492883 CTXN1P60606 82 aa12.29□□□□□ -0.44
CCM2-217ENST00000492883 PRPS1P60891 318 aa12.29□□□□□ -0.44
CCM2-217ENST00000492883 TAB1Q15750 504 aa12.29□□□□□ -0.44
CCM2-217ENST00000492883 GABRA6Q16445 453 aa12.29□□□□□ -0.44
CCM2-217ENST00000492883 ZBED5Q49AG3 693 aa12.29□□□□□ -0.44
CCM2-217ENST00000492883 C1orf146Q5VVC0 180 aa12.29□□□□□ -0.44
CCM2-217ENST00000492883 OR2T5Q6IEZ7 315 aa12.29□□□□□ -0.44
CCM2-217ENST00000492883 P2RY8Q86VZ1 359 aa12.29□□□□□ -0.44
CCM2-217ENST00000492883 OR2T29Q8NH02 315 aa12.29□□□□□ -0.44
CCM2-217ENST00000492883 OR52N5Q8NH56 324 aa12.29□□□□□ -0.44
CCM2-217ENST00000492883 ZNF566Q969W8 418 aa12.29□□□□□ -0.44
CCM2-217ENST00000492883 SLC25A44Q96H78 314 aaPredicted RBP12.29□□□□□ -0.44
CCM2-217ENST00000492883 LRR1Q96L50 414 aa12.29□□□□□ -0.44
CCM2-217ENST00000492883 FUZQ9BT04 418 aa12.29□□□□□ -0.44
CCM2-217ENST00000492883 POLDIP3Q9BY77 421 aaKnown RBP12.29□□□□□ -0.44
CCM2-217ENST00000492883 NDEL1Q9GZM8 345 aa12.29□□□□□ -0.44
CCM2-217ENST00000492883 YY1AP1Q9H869 796 aa12.29□□□□□ -0.44
CCM2-217ENST00000492883 REEP1Q9H902 201 aa12.29□□□□□ -0.44
CCM2-217ENST00000492883 CRLF2Q9HC73 371 aa12.29□□□□□ -0.44
CCM2-217ENST00000492883 NGBQ9NPG2 151 aa12.29□□□□□ -0.44
CCM2-217ENST00000492883 RASSF1Q9NS23 344 aa12.29□□□□□ -0.44
CCM2-217ENST00000492883 SAMHD1Q9Y3Z3 626 aaKnown RBP12.29□□□□□ -0.44
CCM2-217ENST00000492883 LYVE1Q9Y5Y7 322 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms