RNA–Protein interactions for RNA: ENST00000492270.1

UPF3A-209, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2 BASIC

Gene UPF3A, Length 494 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-209ENST00000492270 YTHDF3Q7Z739 585 aaKnown RBP21.57■■□□□ 1.04
UPF3A-209ENST00000492270 GPR137CQ8N3F9 429 aa21.57■■□□□ 1.04
UPF3A-209ENST00000492270 PIK3C3Q8NEB9 887 aa21.57■■□□□ 1.04
UPF3A-209ENST00000492270 PFN4Q8NHR9 129 aa21.57■■□□□ 1.04
UPF3A-209ENST00000492270 TMEM255BQ8WV15 326 aa21.57■■□□□ 1.04
UPF3A-209ENST00000492270 HOPXQ9BPY8 73 aaPredicted RBP21.57■■□□□ 1.04
UPF3A-209ENST00000492270 ZNF701Q9NV72 531 aaPredicted RBP21.57■■□□□ 1.04
UPF3A-209ENST00000492270 RIMS3Q9UJD0 308 aa21.57■■□□□ 1.04
UPF3A-209ENST00000492270 AP3M1Q9Y2T2 418 aa21.57■■□□□ 1.04
UPF3A-209ENST00000492270 NOX1Q9Y5S8 564 aa21.57■■□□□ 1.04
UPF3A-209ENST00000492270 SLC35F4A4IF30 521 aa21.56■■□□□ 1.04
UPF3A-209ENST00000492270 E7EQL1 145 aa21.56■■□□□ 1.04
UPF3A-209ENST00000492270 M0R3G1 203 aa21.56■■□□□ 1.04
UPF3A-209ENST00000492270 CXCR6O00574 342 aa21.56■■□□□ 1.04
UPF3A-209ENST00000492270 SEC14L2O76054 403 aa21.56■■□□□ 1.04
UPF3A-209ENST00000492270 WNT11O96014 354 aa21.56■■□□□ 1.04
UPF3A-209ENST00000492270 CDKN1AP38936 164 aa21.56■■□□□ 1.04
UPF3A-209ENST00000492270 SELENOWP63302 87 aa21.56■■□□□ 1.04
UPF3A-209ENST00000492270 ARF1P84077 181 aaKnown RBP21.56■■□□□ 1.04
UPF3A-209ENST00000492270 SLC46A3Q7Z3Q1 461 aa21.56■■□□□ 1.04
UPF3A-209ENST00000492270 VTCN1Q7Z7D3 282 aa21.56■■□□□ 1.04
UPF3A-209ENST00000492270 Q96MF0 132 aa21.56■■□□□ 1.04
UPF3A-209ENST00000492270 SLC19A3Q9BZV2 496 aa21.56■■□□□ 1.04
UPF3A-209ENST00000492270 ALG2Q9H553 416 aa21.56■■□□□ 1.04
UPF3A-209ENST00000492270 FKRPQ9H9S5 495 aa21.56■■□□□ 1.04
UPF3A-209ENST00000492270 CRLF2Q9HC73 371 aa21.56■■□□□ 1.04
UPF3A-209ENST00000492270 NANSQ9NR45 359 aa21.56■■□□□ 1.04
UPF3A-209ENST00000492270 TAS2R5Q9NYW4 299 aa21.56■■□□□ 1.04
UPF3A-209ENST00000492270 POU2F3Q9UKI9 436 aa21.56■■□□□ 1.04
UPF3A-209ENST00000492270 MGAT4BQ9UQ53 548 aa21.56■■□□□ 1.04
UPF3A-209ENST00000492270 OR5F1O95221 314 aa21.55■■□□□ 1.04
UPF3A-209ENST00000492270 UMPSP11172 480 aa21.55■■□□□ 1.04
UPF3A-209ENST00000492270 PAX1P15863 534 aa21.55■■□□□ 1.04
UPF3A-209ENST00000492270 CAMK2DQ13557 499 aa21.55■■□□□ 1.04
UPF3A-209ENST00000492270 ANKRD16Q6P6B7 361 aa21.55■■□□□ 1.04
UPF3A-209ENST00000492270 PXKQ7Z7A4 578 aa21.55■■□□□ 1.04
UPF3A-209ENST00000492270 C20orf196Q8IYI0 205 aa21.55■■□□□ 1.04
UPF3A-209ENST00000492270 CMTM5Q96DZ9 223 aa21.55■■□□□ 1.04
UPF3A-209ENST00000492270 ZNF229Q9UJW7 825 aa21.55■■□□□ 1.04
UPF3A-209ENST00000492270 OVOL3O00110 214 aa21.54■■□□□ 1.04
UPF3A-209ENST00000492270 CD8AP01732 235 aa21.54■■□□□ 1.04
UPF3A-209ENST00000492270 FUT4P22083 530 aa21.54■■□□□ 1.04
UPF3A-209ENST00000492270 SH3BGRP55822 239 aaPredicted RBP21.54■■□□□ 1.04
UPF3A-209ENST00000492270 PSME3P61289 254 aa21.54■■□□□ 1.04
UPF3A-209ENST00000492270 RADILQ96JH8 1075 aa21.54■■□□□ 1.04
UPF3A-209ENST00000492270 TRAF4Q9BUZ4 470 aaPredicted RBP21.54■■□□□ 1.04
UPF3A-209ENST00000492270 POLR2J2Q9GZM3 115 aaKnown RBP21.54■■□□□ 1.04
UPF3A-209ENST00000492270 POLR2J3Q9H1A7 115 aaKnown RBP21.54■■□□□ 1.04
UPF3A-209ENST00000492270 OBP2BQ9NPH6 170 aa21.54■■□□□ 1.04
UPF3A-209ENST00000492270 C20orf141Q9NUB4 165 aa21.54■■□□□ 1.04
UPF3A-209ENST00000492270 ABCD2Q9UBJ2 740 aa21.54■■□□□ 1.04
UPF3A-209ENST00000492270 SNX13Q9Y5W8 968 aa21.54■■□□□ 1.04
UPF3A-209ENST00000492270 ARPC4-TTLL3A0A0A6YYG9 625 aa21.53■■□□□ 1.04
UPF3A-209ENST00000492270 IGHV1-18A0A0C4DH31 117 aa21.53■■□□□ 1.04
UPF3A-209ENST00000492270 ATP6V1G2-DDX39BF2Z307 99 aa21.53■■□□□ 1.04
UPF3A-209ENST00000492270 GSTA4O15217 222 aa21.53■■□□□ 1.04
UPF3A-209ENST00000492270 TMCC2O75069 709 aa21.53■■□□□ 1.04
UPF3A-209ENST00000492270 OR6A2O95222 327 aa21.53■■□□□ 1.04
UPF3A-209ENST00000492270 ZNF682O95780 498 aa21.53■■□□□ 1.04
UPF3A-209ENST00000492270 MT-ND1P03886 318 aa21.53■■□□□ 1.04
UPF3A-209ENST00000492270 ASAH2BP0C7U1 165 aa21.53■■□□□ 1.04
UPF3A-209ENST00000492270 IFNGR1P15260 489 aa21.53■■□□□ 1.04
UPF3A-209ENST00000492270 NCK1P16333 377 aa21.53■■□□□ 1.04
UPF3A-209ENST00000492270 PRDX6P30041 224 aa21.53■■□□□ 1.04
UPF3A-209ENST00000492270 BIDP55957 195 aa21.53■■□□□ 1.04
UPF3A-209ENST00000492270 ATP5J2P56134 94 aa21.53■■□□□ 1.04
UPF3A-209ENST00000492270 UBE2NP61088 152 aaKnown RBP21.53■■□□□ 1.04
UPF3A-209ENST00000492270 ANKK1Q8NFD2 765 aa21.53■■□□□ 1.04
UPF3A-209ENST00000492270 MAGEE2Q8TD90 523 aaPredicted RBP21.53■■□□□ 1.04
UPF3A-209ENST00000492270 GSX1Q9H4S2 264 aaPredicted RBP21.53■■□□□ 1.04
UPF3A-209ENST00000492270 A4GNTQ9UNA3 340 aa21.53■■□□□ 1.04
UPF3A-209ENST00000492270 ZNF503-AS2A6NEH8 195 aa21.52■■□□□ 1.04
UPF3A-209ENST00000492270 RNF13O43567 381 aa21.52■■□□□ 1.04
UPF3A-209ENST00000492270 PIP5K1CO60331 668 aa21.52■■□□□ 1.04
UPF3A-209ENST00000492270 RBM34P42696 430 aaKnown RBP21.52■■□□□ 1.04
UPF3A-209ENST00000492270 YAP1P46937 504 aaKnown RBP21.52■■□□□ 1.04
UPF3A-209ENST00000492270 ZP4Q12836 540 aa21.52■■□□□ 1.04
UPF3A-209ENST00000492270 MELKQ14680 651 aa21.52■■□□□ 1.04
UPF3A-209ENST00000492270 C1QTNF12Q5T7M4 302 aa21.52■■□□□ 1.04
UPF3A-209ENST00000492270 PRSS57Q6UWY2 283 aa21.52■■□□□ 1.04
UPF3A-209ENST00000492270 SLC35D2Q76EJ3 337 aa21.52■■□□□ 1.04
UPF3A-209ENST00000492270 NANOGNBQ7Z5D8 188 aa21.52■■□□□ 1.04
UPF3A-209ENST00000492270 DTX2Q86UW9 622 aa21.52■■□□□ 1.04
UPF3A-209ENST00000492270 TMEM239Q8WW34 195 aa21.52■■□□□ 1.04
UPF3A-209ENST00000492270 LZICQ8WZA0 190 aa21.52■■□□□ 1.04
UPF3A-209ENST00000492270 GTPBP3Q969Y2 492 aaKnown RBP21.52■■□□□ 1.04
UPF3A-209ENST00000492270 PRRC1Q96M27 445 aa21.52■■□□□ 1.04
UPF3A-209ENST00000492270 KCTD14Q9BQ13 255 aaPredicted RBP21.52■■□□□ 1.04
UPF3A-209ENST00000492270 SEC61A2Q9H9S3 476 aa21.52■■□□□ 1.04
UPF3A-209ENST00000492270 MOKQ9UQ07 419 aa21.52■■□□□ 1.04
UPF3A-209ENST00000492270 ATP23Q9Y6H3 246 aa21.52■■□□□ 1.04
UPF3A-209ENST00000492270 SETD2Q9BYW2 2564 aaPredicted RBP21.51■■□□□ 1.03
UPF3A-209ENST00000492270 TRIM64A6NGJ6 449 aa21.51■■□□□ 1.03
UPF3A-209ENST00000492270 TRIM64BA6NI03 449 aa21.51■■□□□ 1.03
UPF3A-209ENST00000492270 ZNF726A6NNF4 738 aa21.51■■□□□ 1.03
UPF3A-209ENST00000492270 J3KTA2 159 aa21.51■■□□□ 1.03
UPF3A-209ENST00000492270 SERPINA1P01009 418 aa21.51■■□□□ 1.03
UPF3A-209ENST00000492270 LSM11P83369 360 aaKnown RBP eCLIP21.51■■□□□ 1.03
UPF3A-209ENST00000492270 CBLL1Q75N03 491 aa21.51■■□□□ 1.03
UPF3A-209ENST00000492270 MYPOPQ86VE0 399 aaPredicted RBP21.51■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms