RNA–Protein interactions for RNA: ENST00000491330.1

PDLIM2-217, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-217ENST00000491330 TRAPPC13A5PLN9 417 aa14.46□□□□□ -0.09
PDLIM2-217ENST00000491330 ZNF99A8MXY4 864 aaPredicted RBP14.46□□□□□ -0.09
PDLIM2-217ENST00000491330 B9A039 149 aa14.46□□□□□ -0.09
PDLIM2-217ENST00000491330 M0R3G1 203 aa14.46□□□□□ -0.09
PDLIM2-217ENST00000491330 PDE5AO76074 875 aa14.46□□□□□ -0.09
PDLIM2-217ENST00000491330 ADORA3P0DMS8 318 aa14.46□□□□□ -0.09
PDLIM2-217ENST00000491330 UMPSP11172 480 aa14.46□□□□□ -0.09
PDLIM2-217ENST00000491330 CBR1P16152 277 aa14.46□□□□□ -0.09
PDLIM2-217ENST00000491330 PTNP21246 168 aa14.46□□□□□ -0.09
PDLIM2-217ENST00000491330 NPTX1Q15818 432 aa14.46□□□□□ -0.09
PDLIM2-217ENST00000491330 CEACAM16Q2WEN9 425 aa14.46□□□□□ -0.09
PDLIM2-217ENST00000491330 SLC46A3Q7Z3Q1 461 aa14.46□□□□□ -0.09
PDLIM2-217ENST00000491330 HDDC2Q7Z4H3 204 aa14.46□□□□□ -0.09
PDLIM2-217ENST00000491330 C10orf111Q8N326 155 aa14.46□□□□□ -0.09
PDLIM2-217ENST00000491330 OR5J2Q8NH18 312 aa14.46□□□□□ -0.09
PDLIM2-217ENST00000491330 CMTM5Q96DZ9 223 aa14.46□□□□□ -0.09
PDLIM2-217ENST00000491330 HOPXQ9BPY8 73 aaPredicted RBP14.46□□□□□ -0.09
PDLIM2-217ENST00000491330 ULBP2Q9BZM5 246 aa14.46□□□□□ -0.09
PDLIM2-217ENST00000491330 DENND2DQ9H6A0 471 aaPredicted RBP14.46□□□□□ -0.09
PDLIM2-217ENST00000491330 NANSQ9NR45 359 aa14.46□□□□□ -0.09
PDLIM2-217ENST00000491330 GDF2Q9UK05 429 aaPredicted RBP14.46□□□□□ -0.09
PDLIM2-217ENST00000491330 ACANP16112 2415 aa14.46□□□□□ -0.09
PDLIM2-217ENST00000491330 FLNAP21333 2647 aaKnown RBP14.45□□□□□ -0.1
PDLIM2-217ENST00000491330 CPSF4LA6NMK7 179 aaKnown RBP14.45□□□□□ -0.1
PDLIM2-217ENST00000491330 FXYD1O00168 92 aa14.45□□□□□ -0.1
PDLIM2-217ENST00000491330 SERPINI2O75830 405 aa14.45□□□□□ -0.1
PDLIM2-217ENST00000491330 ZNF432O94892 652 aa14.45□□□□□ -0.1
PDLIM2-217ENST00000491330 IFNA2P01563 188 aa14.45□□□□□ -0.1
PDLIM2-217ENST00000491330 OPN1SWP03999 348 aa14.45□□□□□ -0.1
PDLIM2-217ENST00000491330 SPOCK1Q08629 439 aa14.45□□□□□ -0.1
PDLIM2-217ENST00000491330 GLIPR1L2Q4G1C9 344 aa14.45□□□□□ -0.1
PDLIM2-217ENST00000491330 ENTPD8Q5MY95 495 aa14.45□□□□□ -0.1
PDLIM2-217ENST00000491330 CARD17Q5XLA6 110 aa14.45□□□□□ -0.1
PDLIM2-217ENST00000491330 SPATA21Q7Z572 469 aa14.45□□□□□ -0.1
PDLIM2-217ENST00000491330 CALHM3Q86XJ0 350 aa14.45□□□□□ -0.1
PDLIM2-217ENST00000491330 ZNF540Q8NDQ6 660 aa14.45□□□□□ -0.1
PDLIM2-217ENST00000491330 VANGL1Q8TAA9 524 aaPredicted RBP14.45□□□□□ -0.1
PDLIM2-217ENST00000491330 SLC41A3Q96GZ6 507 aa14.45□□□□□ -0.1
PDLIM2-217ENST00000491330 OR2M2Q96R28 347 aa14.45□□□□□ -0.1
PDLIM2-217ENST00000491330 ARHGDIGQ99819 225 aa14.45□□□□□ -0.1
PDLIM2-217ENST00000491330 VRK1Q99986 396 aaPredicted RBP14.45□□□□□ -0.1
PDLIM2-217ENST00000491330 RAB1BQ9H0U4 201 aa14.45□□□□□ -0.1
PDLIM2-217ENST00000491330 PCDHAC1Q9H158 963 aa14.45□□□□□ -0.1
PDLIM2-217ENST00000491330 CA10Q9NS85 328 aa14.45□□□□□ -0.1
PDLIM2-217ENST00000491330 ROS1P08922 2347 aa14.44□□□□□ -0.1
PDLIM2-217ENST00000491330 IGKV1D-42A0A075B6H8 117 aa14.44□□□□□ -0.1
PDLIM2-217ENST00000491330 IGHV1-18A0A0C4DH31 117 aa14.44□□□□□ -0.1
PDLIM2-217ENST00000491330 SLC35F4A4IF30 521 aa14.44□□□□□ -0.1
PDLIM2-217ENST00000491330 FAM220BPB1ANY3 271 aa14.44□□□□□ -0.1
PDLIM2-217ENST00000491330 INAFM1C9JVW0 142 aa14.44□□□□□ -0.1
PDLIM2-217ENST00000491330 M0R3H8 397 aa14.44□□□□□ -0.1
PDLIM2-217ENST00000491330 DYNC1I1O14576 645 aa14.44□□□□□ -0.1
PDLIM2-217ENST00000491330 RNF13O43567 381 aa14.44□□□□□ -0.1
PDLIM2-217ENST00000491330 FARS2O95363 451 aaKnown RBP14.44□□□□□ -0.1
PDLIM2-217ENST00000491330 RAB36O95755 333 aa14.44□□□□□ -0.1
PDLIM2-217ENST00000491330 F12P00748 615 aaPredicted RBP14.44□□□□□ -0.1
PDLIM2-217ENST00000491330 CD79AP11912 226 aa14.44□□□□□ -0.1
PDLIM2-217ENST00000491330 CSNK1A1P48729 337 aa14.44□□□□□ -0.1
PDLIM2-217ENST00000491330 PDLIM4P50479 330 aa14.44□□□□□ -0.1
PDLIM2-217ENST00000491330 GZMMP51124 257 aa14.44□□□□□ -0.1
PDLIM2-217ENST00000491330 NAAAQ02083 359 aa14.44□□□□□ -0.1
PDLIM2-217ENST00000491330 NPRL3Q12980 569 aa14.44□□□□□ -0.1
PDLIM2-217ENST00000491330 DUSP7Q16829 419 aa14.44□□□□□ -0.1
PDLIM2-217ENST00000491330 HACD2Q6Y1H2 254 aa14.44□□□□□ -0.1
PDLIM2-217ENST00000491330 C20orf196Q8IYI0 205 aa14.44□□□□□ -0.1
PDLIM2-217ENST00000491330 ADAMTS16Q8TE57 1224 aa14.44□□□□□ -0.1
PDLIM2-217ENST00000491330 LZICQ8WZA0 190 aa14.44□□□□□ -0.1
PDLIM2-217ENST00000491330 PRR14Q9BWN1 585 aa14.44□□□□□ -0.1
PDLIM2-217ENST00000491330 EFCAB1Q9HAE3 211 aa14.44□□□□□ -0.1
PDLIM2-217ENST00000491330 YAE1D1Q9NRH1 226 aa14.44□□□□□ -0.1
PDLIM2-217ENST00000491330 B3GAT1Q9P2W7 334 aa14.44□□□□□ -0.1
PDLIM2-217ENST00000491330 STX18Q9P2W9 335 aaKnown RBP14.44□□□□□ -0.1
PDLIM2-217ENST00000491330 CRNNQ9UBG3 495 aaPredicted RBP14.44□□□□□ -0.1
PDLIM2-217ENST00000491330 SLC7A7Q9UM01 511 aa14.44□□□□□ -0.1
PDLIM2-217ENST00000491330 SH3GLB1Q9Y371 365 aa14.44□□□□□ -0.1
PDLIM2-217ENST00000491330 LOC100653049A0A140TA62 436 aa14.43□□□□□ -0.1
PDLIM2-217ENST00000491330 MS4A18H0YCH9 400 aa14.43□□□□□ -0.1
PDLIM2-217ENST00000491330 NDUFS8O00217 210 aa14.43□□□□□ -0.1
PDLIM2-217ENST00000491330 PLPP3O14495 311 aa14.43□□□□□ -0.1
PDLIM2-217ENST00000491330 KRT34O76011 436 aa14.43□□□□□ -0.1
PDLIM2-217ENST00000491330 BGLAPP02818 100 aa14.43□□□□□ -0.1
PDLIM2-217ENST00000491330 NR2C1P13056 603 aa14.43□□□□□ -0.1
PDLIM2-217ENST00000491330 NPR2P20594 1047 aa14.43□□□□□ -0.1
PDLIM2-217ENST00000491330 PRDX6P30041 224 aa14.43□□□□□ -0.1
PDLIM2-217ENST00000491330 TAS2R41P59536 307 aa14.43□□□□□ -0.1
PDLIM2-217ENST00000491330 SLC25A3Q00325 362 aa14.43□□□□□ -0.1
PDLIM2-217ENST00000491330 GALK2Q01415 458 aa14.43□□□□□ -0.1
PDLIM2-217ENST00000491330 SELPLGQ14242 412 aa14.43□□□□□ -0.1
PDLIM2-217ENST00000491330 GSG1Q2KHT4 349 aa14.43□□□□□ -0.1
PDLIM2-217ENST00000491330 MS4A18Q3C1V0 323 aa14.43□□□□□ -0.1
PDLIM2-217ENST00000491330 C11orf71Q6IPW1 123 aa14.43□□□□□ -0.1
PDLIM2-217ENST00000491330 VHLLQ6RSH7 139 aa14.43□□□□□ -0.1
PDLIM2-217ENST00000491330 ZNF813Q6ZN06 617 aa14.43□□□□□ -0.1
PDLIM2-217ENST00000491330 DPPA2Q7Z7J5 298 aa14.43□□□□□ -0.1
PDLIM2-217ENST00000491330 OR6T1Q8NGN1 323 aa14.43□□□□□ -0.1
PDLIM2-217ENST00000491330 PIMREGQ9BSJ6 248 aa14.43□□□□□ -0.1
PDLIM2-217ENST00000491330 ZNF229Q9UJW7 825 aa14.43□□□□□ -0.1
PDLIM2-217ENST00000491330 A0A1W2PRG6 482 aa14.42□□□□□ -0.1
PDLIM2-217ENST00000491330 HTR3EA5X5Y0 456 aa14.42□□□□□ -0.1
PDLIM2-217ENST00000491330 GMNCA6NCL1 334 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms