RNA–Protein interactions for RNA: ENST00000491128.5

SMPD4-219, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 2,570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-219ENST00000491128 KLHL13Q9P2N7 655 aa12.51□□□□□ -0.41
SMPD4-219ENST00000491128 ING1Q9UK53 422 aaPredicted RBP12.51□□□□□ -0.41
SMPD4-219ENST00000491128 LSM2Q9Y333 95 aaKnown RBP12.51□□□□□ -0.41
SMPD4-219ENST00000491128 FAM47E-STBD1D6RA91 191 aa12.51□□□□□ -0.41
SMPD4-219ENST00000491128 TRIM3O75382 744 aaPredicted RBP12.51□□□□□ -0.41
SMPD4-219ENST00000491128 IFNGR1P15260 489 aa12.51□□□□□ -0.41
SMPD4-219ENST00000491128 IDUAP35475 653 aa12.51□□□□□ -0.41
SMPD4-219ENST00000491128 CENPAP49450 140 aa12.51□□□□□ -0.41
SMPD4-219ENST00000491128 CLDN20P56880 219 aa12.51□□□□□ -0.41
SMPD4-219ENST00000491128 SSX1Q16384 188 aa12.51□□□□□ -0.41
SMPD4-219ENST00000491128 PLEKHG7Q6ZR37 379 aa12.51□□□□□ -0.41
SMPD4-219ENST00000491128 P2RY8Q86VZ1 359 aa12.51□□□□□ -0.41
SMPD4-219ENST00000491128 OR6V1Q8N148 313 aa12.51□□□□□ -0.41
SMPD4-219ENST00000491128 FER1L6-AS2Q96M78 137 aa12.51□□□□□ -0.41
SMPD4-219ENST00000491128 DDOQ99489 341 aa12.51□□□□□ -0.41
SMPD4-219ENST00000491128 NUAK2Q9H093 628 aa12.51□□□□□ -0.41
SMPD4-219ENST00000491128 ADGRL4Q9HBW9 690 aa12.51□□□□□ -0.41
SMPD4-219ENST00000491128 SERINC1Q9NRX5 453 aa12.51□□□□□ -0.41
SMPD4-219ENST00000491128 ARPC3O15145 178 aa12.5□□□□□ -0.41
SMPD4-219ENST00000491128 OR2T1O43869 369 aa12.5□□□□□ -0.41
SMPD4-219ENST00000491128 DXOO77932 396 aaKnown RBP12.5□□□□□ -0.41
SMPD4-219ENST00000491128 TFP02787 698 aa12.5□□□□□ -0.41
SMPD4-219ENST00000491128 GDF1P27539 372 aa12.5□□□□□ -0.41
SMPD4-219ENST00000491128 RGS6P49758 472 aa12.5□□□□□ -0.41
SMPD4-219ENST00000491128 DSCR4P56555 118 aaPredicted RBP12.5□□□□□ -0.41
SMPD4-219ENST00000491128 PUDPQ08623 228 aa12.5□□□□□ -0.41
SMPD4-219ENST00000491128 CLN3Q13286 438 aa12.5□□□□□ -0.41
SMPD4-219ENST00000491128 DEFB109BQ30KR1 87 aa12.5□□□□□ -0.41
SMPD4-219ENST00000491128 GALNTL5Q7Z4T8 443 aa12.5□□□□□ -0.41
SMPD4-219ENST00000491128 GID4Q8IVV7 300 aa12.5□□□□□ -0.41
SMPD4-219ENST00000491128 SULF2Q8IWU5 870 aa12.5□□□□□ -0.41
SMPD4-219ENST00000491128 HTRA1Q92743 480 aa12.5□□□□□ -0.41
SMPD4-219ENST00000491128 CHCHD6Q9BRQ6 235 aa12.5□□□□□ -0.41
SMPD4-219ENST00000491128 ZNF649Q9BS31 505 aa12.5□□□□□ -0.41
SMPD4-219ENST00000491128 TSPAN10Q9H1Z9 355 aaPredicted RBP12.5□□□□□ -0.41
SMPD4-219ENST00000491128 BAIAP2Q9UQB8 552 aa12.5□□□□□ -0.41
SMPD4-219ENST00000491128 MAP1BP46821 2468 aaKnown RBP12.5□□□□□ -0.41
SMPD4-219ENST00000491128 EFSO43281 561 aa12.5□□□□□ -0.41
SMPD4-219ENST00000491128 CBR3O75828 277 aa12.5□□□□□ -0.41
SMPD4-219ENST00000491128 MT-ATP6P00846 226 aa12.5□□□□□ -0.41
SMPD4-219ENST00000491128 DIO1P49895 249 aa12.5□□□□□ -0.41
SMPD4-219ENST00000491128 FMODQ06828 376 aa12.5□□□□□ -0.41
SMPD4-219ENST00000491128 SPRYD4Q8WW59 207 aaPredicted RBP12.5□□□□□ -0.41
SMPD4-219ENST00000491128 GPX7Q96SL4 187 aaPredicted RBP12.5□□□□□ -0.41
SMPD4-219ENST00000491128 MND1Q9BWT6 205 aa12.5□□□□□ -0.41
SMPD4-219ENST00000491128 RACGAP1Q9H0H5 632 aa12.5□□□□□ -0.41
SMPD4-219ENST00000491128 CHCHD3Q9NX63 227 aaKnown RBP12.5□□□□□ -0.41
SMPD4-219ENST00000491128 ERVK13-1Q9NX77 482 aa12.5□□□□□ -0.41
SMPD4-219ENST00000491128 ENPP5Q9UJA9 477 aa12.5□□□□□ -0.41
SMPD4-219ENST00000491128 SPIN1Q9Y657 262 aaPredicted RBP12.5□□□□□ -0.41
SMPD4-219ENST00000491128 ZZEF1O43149 2961 aa12.49□□□□□ -0.41
SMPD4-219ENST00000491128 A0A1W2PQL4 384 aaPredicted RBP12.49□□□□□ -0.41
SMPD4-219ENST00000491128 ETV2O00321 342 aaPredicted RBP12.49□□□□□ -0.41
SMPD4-219ENST00000491128 TNFSF11O14788 317 aa12.49□□□□□ -0.41
SMPD4-219ENST00000491128 SNX4O95219 450 aa12.49□□□□□ -0.41
SMPD4-219ENST00000491128 SBK2P0C263 348 aa12.49□□□□□ -0.41
SMPD4-219ENST00000491128 TSPAN19P0C672 248 aa12.49□□□□□ -0.41
SMPD4-219ENST00000491128 FOXO1Q12778 655 aa12.49□□□□□ -0.41
SMPD4-219ENST00000491128 INSL4Q14641 139 aa12.49□□□□□ -0.41
SMPD4-219ENST00000491128 SLC25A53Q5H9E4 307 aa12.49□□□□□ -0.41
SMPD4-219ENST00000491128 RPTNQ6XPR3 784 aa12.49□□□□□ -0.41
SMPD4-219ENST00000491128 H1FNTQ75WM6 255 aaPredicted RBP12.49□□□□□ -0.41
SMPD4-219ENST00000491128 FAM83FQ8NEG4 500 aaPredicted RBP12.49□□□□□ -0.41
SMPD4-219ENST00000491128 PROKR2Q8NFJ6 384 aa12.49□□□□□ -0.41
SMPD4-219ENST00000491128 FDCSPQ8NFU4 85 aa12.49□□□□□ -0.41
SMPD4-219ENST00000491128 UCN2Q96RP3 112 aa12.49□□□□□ -0.41
SMPD4-219ENST00000491128 TIMP4Q99727 224 aa12.49□□□□□ -0.41
SMPD4-219ENST00000491128 OCEL1Q9H607 264 aa12.49□□□□□ -0.41
SMPD4-219ENST00000491128 FGF20Q9NP95 211 aaPredicted RBP12.49□□□□□ -0.41
SMPD4-219ENST00000491128 ACACAQ13085 2346 aa12.49□□□□□ -0.41
SMPD4-219ENST00000491128 CACNA1CQ13936 2221 aa12.49□□□□□ -0.41
SMPD4-219ENST00000491128 DAPL1A0PJW8 107 aa12.49□□□□□ -0.41
SMPD4-219ENST00000491128 SULT2B1O00204 365 aa12.49□□□□□ -0.41
SMPD4-219ENST00000491128 ZNHIT1O43257 154 aa12.49□□□□□ -0.41
SMPD4-219ENST00000491128 ZNF208O43345 1280 aa12.49□□□□□ -0.41
SMPD4-219ENST00000491128 MRPS14O60783 128 aaKnown RBP12.49□□□□□ -0.41
SMPD4-219ENST00000491128 NOL3O60936 208 aaKnown RBP12.49□□□□□ -0.41
SMPD4-219ENST00000491128 IGF2P01344 180 aa12.49□□□□□ -0.41
SMPD4-219ENST00000491128 CD82P27701 267 aa12.49□□□□□ -0.41
SMPD4-219ENST00000491128 TTKP33981 857 aa12.49□□□□□ -0.41
SMPD4-219ENST00000491128 DYNC1I2Q13409 638 aaKnown RBP12.49□□□□□ -0.41
SMPD4-219ENST00000491128 PON3Q15166 354 aa12.49□□□□□ -0.41
SMPD4-219ENST00000491128 CARD17Q5XLA6 110 aa12.49□□□□□ -0.41
SMPD4-219ENST00000491128 KLBQ86Z14 1044 aa12.49□□□□□ -0.41
SMPD4-219ENST00000491128 GTPBP8Q8N3Z3 284 aaPredicted RBP12.49□□□□□ -0.41
SMPD4-219ENST00000491128 MFSD8Q8NHS3 518 aa12.49□□□□□ -0.41
SMPD4-219ENST00000491128 TRMT61AQ96FX7 289 aaKnown RBP12.49□□□□□ -0.41
SMPD4-219ENST00000491128 CENPOQ9BU64 300 aa12.49□□□□□ -0.41
SMPD4-219ENST00000491128 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.49□□□□□ -0.41
SMPD4-219ENST00000491128 MRPS18AQ9NVS2 196 aaKnown RBP12.49□□□□□ -0.41
SMPD4-219ENST00000491128 KLHL21Q9UJP4 597 aa12.49□□□□□ -0.41
SMPD4-219ENST00000491128 EXOGQ9Y2C4 368 aaKnown RBP12.49□□□□□ -0.41
SMPD4-219ENST00000491128 ANKRD11Q6UB99 2663 aaPredicted RBP12.49□□□□□ -0.41
SMPD4-219ENST00000491128 BSNQ9UPA5 3926 aa12.49□□□□□ -0.41
SMPD4-219ENST00000491128 PIEZO2Q9H5I5 2752 aa12.48□□□□□ -0.41
SMPD4-219ENST00000491128 SLC22A31A6NKX4 558 aa12.48□□□□□ -0.41
SMPD4-219ENST00000491128 E9PI62 339 aa12.48□□□□□ -0.41
SMPD4-219ENST00000491128 J3QRE1 110 aa12.48□□□□□ -0.41
SMPD4-219ENST00000491128 MEP1BQ16820 701 aa12.48□□□□□ -0.41
SMPD4-219ENST00000491128 AGAP7PQ5VUJ5 663 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms