RNA–Protein interactions for RNA: ENST00000489979.1

VARS-227, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-227ENST00000489979 DEFA6Q01524 100 aa11.95□□□□□ -0.5
VARS-227ENST00000489979 FXNQ16595 210 aa11.95□□□□□ -0.5
VARS-227ENST00000489979 ALKBH6Q3KRA9 238 aa11.95□□□□□ -0.5
VARS-227ENST00000489979 AVPI1Q5T686 147 aa11.95□□□□□ -0.5
VARS-227ENST00000489979 CARD17Q5XLA6 110 aa11.95□□□□□ -0.5
VARS-227ENST00000489979 SHISA2Q6UWI4 295 aa11.95□□□□□ -0.5
VARS-227ENST00000489979 LRRC34Q8IZ02 419 aa11.95□□□□□ -0.5
VARS-227ENST00000489979 TMEM123Q8N131 208 aa11.95□□□□□ -0.5
VARS-227ENST00000489979 BPIFB2Q8N4F0 458 aa11.95□□□□□ -0.5
VARS-227ENST00000489979 ZNF781Q8N8C0 355 aa11.95□□□□□ -0.5
VARS-227ENST00000489979 ZNF417Q8TAU3 575 aa11.95□□□□□ -0.5
VARS-227ENST00000489979 TEX37Q96LM6 180 aa11.95□□□□□ -0.5
VARS-227ENST00000489979 ZNF587Q96SQ5 575 aaPredicted RBP11.95□□□□□ -0.5
VARS-227ENST00000489979 P2RX2Q9UBL9 471 aa11.95□□□□□ -0.5
VARS-227ENST00000489979 CHST2Q9Y4C5 530 aa11.95□□□□□ -0.5
VARS-227ENST00000489979 DSPPQ9NZW4 1301 aa11.94□□□□□ -0.5
VARS-227ENST00000489979 A0A0G2JMP0 313 aa11.94□□□□□ -0.5
VARS-227ENST00000489979 A0A0X1KG70 313 aa11.94□□□□□ -0.5
VARS-227ENST00000489979 A0A1W2PPW3 197 aa11.94□□□□□ -0.5
VARS-227ENST00000489979 PLPP2O43688 288 aa11.94□□□□□ -0.5
VARS-227ENST00000489979 TRAF3IP2O43734 574 aaPredicted RBP11.94□□□□□ -0.5
VARS-227ENST00000489979 AKAP8O43823 692 aaKnown RBP11.94□□□□□ -0.5
VARS-227ENST00000489979 CDC14BO60729 498 aa11.94□□□□□ -0.5
VARS-227ENST00000489979 MAGEB1P43366 347 aa11.94□□□□□ -0.5
VARS-227ENST00000489979 AQP5P55064 265 aa11.94□□□□□ -0.5
VARS-227ENST00000489979 UFM1P61960 85 aa11.94□□□□□ -0.5
VARS-227ENST00000489979 HOXC5Q00444 222 aa11.94□□□□□ -0.5
VARS-227ENST00000489979 MVKQ03426 396 aa11.94□□□□□ -0.5
VARS-227ENST00000489979 LARS2Q15031 903 aaKnown RBP11.94□□□□□ -0.5
VARS-227ENST00000489979 GLIPR1L2Q4G1C9 344 aa11.94□□□□□ -0.5
VARS-227ENST00000489979 RNF220Q5VTB9 566 aa11.94□□□□□ -0.5
VARS-227ENST00000489979 ZNF813Q6ZN06 617 aa11.94□□□□□ -0.5
VARS-227ENST00000489979 C20orf196Q8IYI0 205 aa11.94□□□□□ -0.5
VARS-227ENST00000489979 OR4M2Q8NGB6 313 aa11.94□□□□□ -0.5
VARS-227ENST00000489979 NANPQ8TBE9 248 aa11.94□□□□□ -0.5
VARS-227ENST00000489979 MGARPQ8TDB4 240 aa11.94□□□□□ -0.5
VARS-227ENST00000489979 TAAR8Q969N4 342 aa11.94□□□□□ -0.5
VARS-227ENST00000489979 ZNF385DQ9H6B1 395 aa11.94□□□□□ -0.5
VARS-227ENST00000489979 ZNF224Q9NZL3 707 aa11.94□□□□□ -0.5
VARS-227ENST00000489979 ZNF346Q9UL40 294 aaKnown RBP11.94□□□□□ -0.5
VARS-227ENST00000489979 POFUT2Q9Y2G5 429 aa11.94□□□□□ -0.5
VARS-227ENST00000489979 J3QLI3 93 aa11.93□□□□□ -0.5
VARS-227ENST00000489979 FZD7O75084 574 aa11.93□□□□□ -0.5
VARS-227ENST00000489979 DEAF1O75398 565 aaPredicted RBP11.93□□□□□ -0.5
VARS-227ENST00000489979 KRT75O95678 551 aa11.93□□□□□ -0.5
VARS-227ENST00000489979 RAB36O95755 333 aa11.93□□□□□ -0.5
VARS-227ENST00000489979 BCHEP06276 602 aa11.93□□□□□ -0.5
VARS-227ENST00000489979 ETFAP13804 333 aa11.93□□□□□ -0.5
VARS-227ENST00000489979 B4GALT1P15291 398 aa11.93□□□□□ -0.5
VARS-227ENST00000489979 LBPP18428 481 aa11.93□□□□□ -0.5
VARS-227ENST00000489979 CBLP22681 906 aa11.93□□□□□ -0.5
VARS-227ENST00000489979 IL12AP29459 219 aa11.93□□□□□ -0.5
VARS-227ENST00000489979 GRPRP30550 384 aa11.93□□□□□ -0.5
VARS-227ENST00000489979 GIPRP48546 466 aa11.93□□□□□ -0.5
VARS-227ENST00000489979 CRISP3P54108 245 aa11.93□□□□□ -0.5
VARS-227ENST00000489979 FOXL1Q12952 345 aa11.93□□□□□ -0.5
VARS-227ENST00000489979 MFSD13AQ14CX5 517 aa11.93□□□□□ -0.5
VARS-227ENST00000489979 RPS26P11Q5JNZ5 115 aaPredicted RBP11.93□□□□□ -0.5
VARS-227ENST00000489979 H1FNTQ75WM6 255 aaPredicted RBP11.93□□□□□ -0.5
VARS-227ENST00000489979 NUDCD3Q8IVD9 361 aa11.93□□□□□ -0.5
VARS-227ENST00000489979 C22orf15Q8WYQ4 148 aa11.93□□□□□ -0.5
VARS-227ENST00000489979 RAB39BQ96DA2 213 aa11.93□□□□□ -0.5
VARS-227ENST00000489979 PKNOX2Q96KN3 472 aa11.93□□□□□ -0.5
VARS-227ENST00000489979 OR52E6Q96RD3 313 aa11.93□□□□□ -0.5
VARS-227ENST00000489979 EMC6Q9BV81 110 aa11.93□□□□□ -0.5
VARS-227ENST00000489979 SPATA9Q9BWV2 254 aa11.93□□□□□ -0.5
VARS-227ENST00000489979 DDX28Q9NUL7 540 aaKnown RBP11.93□□□□□ -0.5
VARS-227ENST00000489979 CALML5Q9NZT1 146 aa11.93□□□□□ -0.5
VARS-227ENST00000489979 TAAR3PQ9P1P4 343 aa11.93□□□□□ -0.5
VARS-227ENST00000489979 ZNF232Q9UNY5 417 aa11.93□□□□□ -0.5
VARS-227ENST00000489979 PPIAL4AQ9Y536 164 aa11.93□□□□□ -0.5
VARS-227ENST00000489979 CORINQ9Y5Q5 1042 aa11.93□□□□□ -0.5
VARS-227ENST00000489979 PRKDCP78527 4128 aaKnown RBP11.92□□□□□ -0.5
VARS-227ENST00000489979 LOC102725191A0A1B0GVB3 256 aa11.92□□□□□ -0.5
VARS-227ENST00000489979 WDR91A4D1P6 747 aa11.92□□□□□ -0.5
VARS-227ENST00000489979 MS4A18H0YCH9 400 aa11.92□□□□□ -0.5
VARS-227ENST00000489979 OR2T1O43869 369 aa11.92□□□□□ -0.5
VARS-227ENST00000489979 HPRP00739 348 aa11.92□□□□□ -0.5
VARS-227ENST00000489979 MYZAPP0CAP1 466 aa11.92□□□□□ -0.5
VARS-227ENST00000489979 HKR1P10072 659 aa11.92□□□□□ -0.5
VARS-227ENST00000489979 HLA-DOBP13765 273 aa11.92□□□□□ -0.5
VARS-227ENST00000489979 MVDP53602 400 aa11.92□□□□□ -0.5
VARS-227ENST00000489979 RAB1AP62820 205 aa11.92□□□□□ -0.5
VARS-227ENST00000489979 CCL8P80075 99 aa11.92□□□□□ -0.5
VARS-227ENST00000489979 ZP4Q12836 540 aa11.92□□□□□ -0.5
VARS-227ENST00000489979 RAB39AQ14964 217 aa11.92□□□□□ -0.5
VARS-227ENST00000489979 NKPD1Q17RQ9 610 aa11.92□□□□□ -0.5
VARS-227ENST00000489979 MS4A18Q3C1V0 323 aa11.92□□□□□ -0.5
VARS-227ENST00000489979 FAM69AQ5T7M9 428 aa11.92□□□□□ -0.5
VARS-227ENST00000489979 DCAF12L2Q5VW00 463 aa11.92□□□□□ -0.5
VARS-227ENST00000489979 ZNF627Q7L945 461 aa11.92□□□□□ -0.5
VARS-227ENST00000489979 UEVLDQ8IX04 471 aa11.92□□□□□ -0.5
VARS-227ENST00000489979 RNF217Q8TC41 542 aa11.92□□□□□ -0.5
VARS-227ENST00000489979 SLC38A5Q8WUX1 472 aa11.92□□□□□ -0.5
VARS-227ENST00000489979 LRR1Q96L50 414 aa11.92□□□□□ -0.5
VARS-227ENST00000489979 NUF2Q9BZD4 464 aa11.92□□□□□ -0.5
VARS-227ENST00000489979 C20orf27Q9GZN8 174 aa11.92□□□□□ -0.5
VARS-227ENST00000489979 ARMC7Q9H6L4 198 aa11.92□□□□□ -0.5
VARS-227ENST00000489979 B3GAT2Q9NPZ5 323 aa11.92□□□□□ -0.5
VARS-227ENST00000489979 SLC7A8Q9UHI5 535 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms