RNA–Protein interactions for RNA: ENST00000489816.5

BRD9-208, Transcript of bromodomain containing 9, humanhuman

TSL 1 (best)

Gene BRD9, Length 3,170 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-208ENST00000489816 LAMP5Q9UJQ1 280 aa14.28□□□□□ -0.12
BRD9-208ENST00000489816 IFITM5A6NNB3 132 aa14.28□□□□□ -0.12
BRD9-208ENST00000489816 KHDRBS3O75525 346 aaKnown RBP14.28□□□□□ -0.12
BRD9-208ENST00000489816 GLCEO94923 617 aa14.28□□□□□ -0.12
BRD9-208ENST00000489816 OPN1LWP04000 364 aa14.28□□□□□ -0.12
BRD9-208ENST00000489816 CLPSP04118 112 aa14.28□□□□□ -0.12
BRD9-208ENST00000489816 CD14P08571 375 aa14.28□□□□□ -0.12
BRD9-208ENST00000489816 STOMP27105 288 aa14.28□□□□□ -0.12
BRD9-208ENST00000489816 VEGFCP49767 419 aa14.28□□□□□ -0.12
BRD9-208ENST00000489816 SLC37A1P57057 533 aa14.28□□□□□ -0.12
BRD9-208ENST00000489816 MESTQ5EB52 335 aa14.28□□□□□ -0.12
BRD9-208ENST00000489816 ZNF676Q8N7Q3 588 aa14.28□□□□□ -0.12
BRD9-208ENST00000489816 WDR89Q96FK6 387 aaPredicted RBP14.28□□□□□ -0.12
BRD9-208ENST00000489816 DDOQ99489 341 aa14.28□□□□□ -0.12
BRD9-208ENST00000489816 TCF7L1Q9HCS4 588 aa14.28□□□□□ -0.12
BRD9-208ENST00000489816 PLCL2Q9UPR0 1127 aa14.28□□□□□ -0.12
BRD9-208ENST00000489816 ZNF281Q9Y2X9 895 aa14.28□□□□□ -0.12
BRD9-208ENST00000489816 H2AFB2P0C5Z0 115 aa14.27□□□□□ -0.12
BRD9-208ENST00000489816 SKP2Q13309 424 aa14.27□□□□□ -0.12
BRD9-208ENST00000489816 TRAM1Q15629 374 aa14.27□□□□□ -0.12
BRD9-208ENST00000489816 RAB30Q15771 203 aa14.27□□□□□ -0.12
BRD9-208ENST00000489816 THOC7Q6I9Y2 204 aaKnown RBP14.27□□□□□ -0.12
BRD9-208ENST00000489816 WBP2NLQ6ICG8 309 aa14.27□□□□□ -0.12
BRD9-208ENST00000489816 SLC2A12Q8TD20 617 aa14.27□□□□□ -0.12
BRD9-208ENST00000489816 NSMAFQ92636 917 aa14.27□□□□□ -0.12
BRD9-208ENST00000489816 SPATA2Q9UM82 520 aa14.27□□□□□ -0.12
BRD9-208ENST00000489816 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa14.27□□□□□ -0.13
BRD9-208ENST00000489816 NDUFB5O43674 189 aa14.27□□□□□ -0.13
BRD9-208ENST00000489816 ZNF24P17028 368 aa14.27□□□□□ -0.13
BRD9-208ENST00000489816 ADRA2CP18825 462 aa14.27□□□□□ -0.13
BRD9-208ENST00000489816 CD38P28907 300 aa14.27□□□□□ -0.13
BRD9-208ENST00000489816 DCTDP32321 178 aa14.27□□□□□ -0.13
BRD9-208ENST00000489816 OC90Q02509 493 aaPredicted RBP14.27□□□□□ -0.13
BRD9-208ENST00000489816 ZNF117Q03924 483 aa14.27□□□□□ -0.13
BRD9-208ENST00000489816 LANCL3Q6ZV70 420 aa14.27□□□□□ -0.13
BRD9-208ENST00000489816 ATG4DQ86TL0 474 aaPredicted RBP14.27□□□□□ -0.13
BRD9-208ENST00000489816 OR2T4Q8NH00 348 aa14.27□□□□□ -0.13
BRD9-208ENST00000489816 GPR119Q8TDV5 335 aa14.27□□□□□ -0.13
BRD9-208ENST00000489816 SLC25A38Q96DW6 304 aa14.27□□□□□ -0.13
BRD9-208ENST00000489816 TSPAN32Q96QS1 320 aa14.27□□□□□ -0.13
BRD9-208ENST00000489816 NPAS1Q99742 590 aa14.27□□□□□ -0.13
BRD9-208ENST00000489816 NUDT9Q9BW91 350 aa14.27□□□□□ -0.13
BRD9-208ENST00000489816 FOXQ1Q9C009 403 aa14.27□□□□□ -0.13
BRD9-208ENST00000489816 GHITMQ9H3K2 345 aa14.27□□□□□ -0.13
BRD9-208ENST00000489816 SLA2Q9H6Q3 261 aa14.27□□□□□ -0.13
BRD9-208ENST00000489816 CUTCQ9NTM9 273 aa14.27□□□□□ -0.13
BRD9-208ENST00000489816 SLCO1C1Q9NYB5 712 aa14.27□□□□□ -0.13
BRD9-208ENST00000489816 GMEB2Q9UKD1 530 aa14.27□□□□□ -0.13
BRD9-208ENST00000489816 RHPN2P1A8MT19 583 aa14.26□□□□□ -0.13
BRD9-208ENST00000489816 PPM1BO75688 479 aa14.26□□□□□ -0.13
BRD9-208ENST00000489816 HIST1H2ABP04908 130 aa14.26□□□□□ -0.13
BRD9-208ENST00000489816 GAAP10253 952 aa14.26□□□□□ -0.13
BRD9-208ENST00000489816 ELOCQ15369 112 aa14.26□□□□□ -0.13
BRD9-208ENST00000489816 SLC25A25Q6KCM7 469 aa14.26□□□□□ -0.13
BRD9-208ENST00000489816 FAM199XQ6PEV8 388 aaPredicted RBP14.26□□□□□ -0.13
BRD9-208ENST00000489816 HIST3H2AQ7L7L0 130 aa14.26□□□□□ -0.13
BRD9-208ENST00000489816 SYS1Q8N2H4 156 aa14.26□□□□□ -0.13
BRD9-208ENST00000489816 PIAS4Q8N2W9 510 aaPredicted RBP14.26□□□□□ -0.13
BRD9-208ENST00000489816 OR5AK2Q8NH90 309 aa14.26□□□□□ -0.13
BRD9-208ENST00000489816 HOXB13Q92826 284 aaPredicted RBP14.26□□□□□ -0.13
BRD9-208ENST00000489816 HIST1H2ACQ93077 130 aa14.26□□□□□ -0.13
BRD9-208ENST00000489816 TMEM106AQ96A25 262 aa14.26□□□□□ -0.13
BRD9-208ENST00000489816 SEC22CQ9BRL7 303 aa14.26□□□□□ -0.13
BRD9-208ENST00000489816 MKL2Q9ULH7 1088 aa14.26□□□□□ -0.13
BRD9-208ENST00000489816 SLC22A13Q9Y226 551 aa14.26□□□□□ -0.13
BRD9-208ENST00000489816 FKBP7Q9Y680 259 aa14.26□□□□□ -0.13
BRD9-208ENST00000489816 V9GY05 133 aa14.26□□□□□ -0.13
BRD9-208ENST00000489816 POU3F3P20264 500 aaPredicted RBP14.26□□□□□ -0.13
BRD9-208ENST00000489816 CXCR1P25024 350 aa14.26□□□□□ -0.13
BRD9-208ENST00000489816 PRPS1P60891 318 aa14.26□□□□□ -0.13
BRD9-208ENST00000489816 MELKQ14680 651 aa14.26□□□□□ -0.13
BRD9-208ENST00000489816 STAC2Q6ZMT1 411 aa14.26□□□□□ -0.13
BRD9-208ENST00000489816 RNF166Q96A37 237 aaPredicted RBP14.26□□□□□ -0.13
BRD9-208ENST00000489816 PRDM9Q9NQV7 894 aa14.26□□□□□ -0.13
BRD9-208ENST00000489816 OR5V1Q9UGF6 321 aa14.26□□□□□ -0.13
BRD9-208ENST00000489816 ATXN7L1Q9ULK2 861 aaPredicted RBP14.26□□□□□ -0.13
BRD9-208ENST00000489816 PCDHGA9Q9Y5G4 932 aaKnown RBP14.26□□□□□ -0.13
BRD9-208ENST00000489816 LRP4O75096 1905 aa14.26□□□□□ -0.13
BRD9-208ENST00000489816 TRAV1-2A0A0B4J238 106 aa14.26□□□□□ -0.13
BRD9-208ENST00000489816 ZNF593O00488 134 aaPredicted RBP14.26□□□□□ -0.13
BRD9-208ENST00000489816 GATBO75879 557 aaKnown RBP14.26□□□□□ -0.13
BRD9-208ENST00000489816 MPZL1O95297 269 aa14.26□□□□□ -0.13
BRD9-208ENST00000489816 PTBP1P26599 531 aaKnown RBP eCLIP14.26□□□□□ -0.135e-6■■■■□ 24.3
BRD9-208ENST00000489816 HSD17B7P56937 341 aa14.26□□□□□ -0.13
BRD9-208ENST00000489816 SKP1P63208 163 aa14.26□□□□□ -0.13
BRD9-208ENST00000489816 TMEM69Q5SWH9 247 aa14.26□□□□□ -0.13
BRD9-208ENST00000489816 C1QTNF12Q5T7M4 302 aa14.26□□□□□ -0.13
BRD9-208ENST00000489816 Q6ZTK2 550 aa14.26□□□□□ -0.13
BRD9-208ENST00000489816 FAM122BQ7Z309 247 aa14.26□□□□□ -0.13
BRD9-208ENST00000489816 FAM220AQ7Z4H9 259 aa14.26□□□□□ -0.13
BRD9-208ENST00000489816 SLITRK4Q8IW52 837 aa14.26□□□□□ -0.13
BRD9-208ENST00000489816 GLB1L2Q8IW92 636 aa14.26□□□□□ -0.13
BRD9-208ENST00000489816 ZNF576Q9H609 170 aa14.26□□□□□ -0.13
BRD9-208ENST00000489816 IGHV1OR15-9A0A0B4J2B8 117 aa14.25□□□□□ -0.13
BRD9-208ENST00000489816 SMAD9O15198 467 aaKnown RBP14.25□□□□□ -0.13
BRD9-208ENST00000489816 CDK2P24941 298 aa14.25□□□□□ -0.13
BRD9-208ENST00000489816 IL12BP29460 328 aa14.25□□□□□ -0.13
BRD9-208ENST00000489816 UBE2MP61081 183 aaKnown RBP14.25□□□□□ -0.13
BRD9-208ENST00000489816 BIKQ13323 160 aa14.25□□□□□ -0.13
BRD9-208ENST00000489816 DPYSL5Q9BPU6 564 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms