RNA–Protein interactions for RNA: ENST00000488801.5

PTCD3-217, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-217ENST00000488801 LOXP28300 417 aaPredicted RBP16.42■□□□□ 0.22
PTCD3-217ENST00000488801 RASSF2P50749 326 aa16.42■□□□□ 0.22
PTCD3-217ENST00000488801 LGALS3BPQ08380 585 aa16.42■□□□□ 0.22
PTCD3-217ENST00000488801 TSC22D1Q15714 1073 aa16.42■□□□□ 0.22
PTCD3-217ENST00000488801 NIPAL3Q6P499 406 aa16.42■□□□□ 0.22
PTCD3-217ENST00000488801 ZNF730Q6ZMV8 503 aa16.42■□□□□ 0.22
PTCD3-217ENST00000488801 BHLHA15Q7RTS1 189 aaPredicted RBP16.42■□□□□ 0.22
PTCD3-217ENST00000488801 AQP12AQ8IXF9 295 aa16.42■□□□□ 0.22
PTCD3-217ENST00000488801 ADGRG5Q8IZF4 528 aa16.42■□□□□ 0.22
PTCD3-217ENST00000488801 LRRC75AQ8NAA5 344 aa16.42■□□□□ 0.22
PTCD3-217ENST00000488801 MCUR1Q96AQ8 359 aa16.42■□□□□ 0.22
PTCD3-217ENST00000488801 S100PBPQ96BU1 408 aa16.42■□□□□ 0.22
PTCD3-217ENST00000488801 ZNF347Q96SE7 839 aa16.42■□□□□ 0.22
PTCD3-217ENST00000488801 USB1Q9BQ65 265 aaKnown RBP16.42■□□□□ 0.22
PTCD3-217ENST00000488801 MED29Q9NX70 200 aa16.42■□□□□ 0.22
PTCD3-217ENST00000488801 NDRG3Q9UGV2 375 aa16.42■□□□□ 0.22
PTCD3-217ENST00000488801 POMPQ9Y244 141 aa16.42■□□□□ 0.22
PTCD3-217ENST00000488801 SH3PXD2BA1X283 911 aa16.41■□□□□ 0.22
PTCD3-217ENST00000488801 DEFB108AA8MXU0 73 aa16.41■□□□□ 0.22
PTCD3-217ENST00000488801 CDC42EP2O14613 210 aa16.41■□□□□ 0.22
PTCD3-217ENST00000488801 KLF4O43474 513 aa16.41■□□□□ 0.22
PTCD3-217ENST00000488801 UPK3AO75631 287 aa16.41■□□□□ 0.22
PTCD3-217ENST00000488801 OMPP47874 163 aa16.41■□□□□ 0.22
PTCD3-217ENST00000488801 SLC9A3P48764 834 aa16.41■□□□□ 0.22
PTCD3-217ENST00000488801 TLE4Q04727 773 aa16.41■□□□□ 0.22
PTCD3-217ENST00000488801 FAPQ12884 760 aa16.41■□□□□ 0.22
PTCD3-217ENST00000488801 ANKDD1AQ495B1 522 aa16.41■□□□□ 0.22
PTCD3-217ENST00000488801 C1orf162Q8NEQ5 155 aaPredicted RBP16.41■□□□□ 0.22
PTCD3-217ENST00000488801 TXNDC15Q96J42 360 aa16.41■□□□□ 0.22
PTCD3-217ENST00000488801 ALKBH3Q96Q83 286 aaPredicted RBP16.41■□□□□ 0.22
PTCD3-217ENST00000488801 SEPHS2Q99611 448 aa16.41■□□□□ 0.22
PTCD3-217ENST00000488801 MED18Q9BUE0 208 aa16.41■□□□□ 0.22
PTCD3-217ENST00000488801 TCRBV3S1A0A5B6 114 aa16.4■□□□□ 0.22
PTCD3-217ENST00000488801 C11orf98E9PRG8 122 aa16.4■□□□□ 0.22
PTCD3-217ENST00000488801 HRGP04196 525 aa16.4■□□□□ 0.22
PTCD3-217ENST00000488801 UMPSP11172 480 aa16.4■□□□□ 0.22
PTCD3-217ENST00000488801 IL32P24001 234 aa16.4■□□□□ 0.22
PTCD3-217ENST00000488801 MPGP29372 298 aa16.4■□□□□ 0.22
PTCD3-217ENST00000488801 HMGA2P52926 109 aa16.4■□□□□ 0.22
PTCD3-217ENST00000488801 C1DQ13901 141 aaKnown RBP16.4■□□□□ 0.22
PTCD3-217ENST00000488801 GABRA6Q16445 453 aa16.4■□□□□ 0.22
PTCD3-217ENST00000488801 FGD3Q5JSP0 725 aa16.4■□□□□ 0.22
PTCD3-217ENST00000488801 SLC35D2Q76EJ3 337 aa16.4■□□□□ 0.22
PTCD3-217ENST00000488801 ASRGL1Q7L266 308 aa16.4■□□□□ 0.22
PTCD3-217ENST00000488801 C20orf196Q8IYI0 205 aa16.4■□□□□ 0.22
PTCD3-217ENST00000488801 UBE2J2Q8N2K1 259 aa16.4■□□□□ 0.22
PTCD3-217ENST00000488801 OR4K5Q8NGD3 323 aa16.4■□□□□ 0.22
PTCD3-217ENST00000488801 LRR1Q96L50 414 aa16.4■□□□□ 0.22
PTCD3-217ENST00000488801 MUS81Q96NY9 551 aa16.4■□□□□ 0.22
PTCD3-217ENST00000488801 TRIM15Q9C019 465 aa16.4■□□□□ 0.22
PTCD3-217ENST00000488801 MMADHCQ9H3L0 296 aaPredicted RBP16.4■□□□□ 0.22
PTCD3-217ENST00000488801 NELFAQ9H3P2 528 aa16.4■□□□□ 0.22
PTCD3-217ENST00000488801 RASSF1Q9NS23 344 aa16.4■□□□□ 0.22
PTCD3-217ENST00000488801 TMEM5Q9Y2B1 443 aa16.4■□□□□ 0.22
PTCD3-217ENST00000488801 LYVE1Q9Y5Y7 322 aa16.4■□□□□ 0.22
PTCD3-217ENST00000488801 MYO9AB2RTY4 2548 aa16.4■□□□□ 0.22
PTCD3-217ENST00000488801 SLC35F4A4IF30 521 aa16.39■□□□□ 0.21
PTCD3-217ENST00000488801 OR5H1A6NKK0 313 aa16.39■□□□□ 0.21
PTCD3-217ENST00000488801 SLC43A1O75387 559 aa16.39■□□□□ 0.21
PTCD3-217ENST00000488801 GADD45GO95257 159 aa16.39■□□□□ 0.21
PTCD3-217ENST00000488801 IGHMP01871 453 aa16.39■□□□□ 0.21
PTCD3-217ENST00000488801 HIST1H2ABP04908 130 aa16.39■□□□□ 0.21
PTCD3-217ENST00000488801 RAP2AP10114 183 aa16.39■□□□□ 0.21
PTCD3-217ENST00000488801 IFNGR1P15260 489 aa16.39■□□□□ 0.21
PTCD3-217ENST00000488801 ZNF26P17031 533 aaPredicted RBP16.39■□□□□ 0.21
PTCD3-217ENST00000488801 AHCYP23526 432 aa16.39■□□□□ 0.21
PTCD3-217ENST00000488801 RRM2P31350 389 aa16.39■□□□□ 0.21
PTCD3-217ENST00000488801 DNAJA1P31689 397 aaKnown RBP16.39■□□□□ 0.21
PTCD3-217ENST00000488801 AQP2P41181 271 aa16.39■□□□□ 0.21
PTCD3-217ENST00000488801 GPR4P46093 362 aa16.39■□□□□ 0.21
PTCD3-217ENST00000488801 SMIM11AP58511 58 aa16.39■□□□□ 0.21
PTCD3-217ENST00000488801 KRTAP10-9P60411 292 aa16.39■□□□□ 0.21
PTCD3-217ENST00000488801 SPIBQ01892 262 aa16.39■□□□□ 0.21
PTCD3-217ENST00000488801 FOXD4Q12950 439 aaPredicted RBP16.39■□□□□ 0.21
PTCD3-217ENST00000488801 FLOT2Q14254 428 aa16.39■□□□□ 0.21
PTCD3-217ENST00000488801 TAB1Q15750 504 aa16.39■□□□□ 0.21
PTCD3-217ENST00000488801 PHYHD1Q5SRE7 291 aa16.39■□□□□ 0.21
PTCD3-217ENST00000488801 ANKRD34AQ69YU3 496 aa16.39■□□□□ 0.21
PTCD3-217ENST00000488801 HIST3H2AQ7L7L0 130 aa16.39■□□□□ 0.21
PTCD3-217ENST00000488801 P2RY8Q86VZ1 359 aa16.39■□□□□ 0.21
PTCD3-217ENST00000488801 MEX3DQ86XN8 651 aaKnown RBP16.39■□□□□ 0.21
PTCD3-217ENST00000488801 C17orf78Q8N4C9 275 aa16.39■□□□□ 0.21
PTCD3-217ENST00000488801 OR4C15Q8NGM1 316 aa16.39■□□□□ 0.21
PTCD3-217ENST00000488801 OR13C2Q8NGS9 318 aa16.39■□□□□ 0.21
PTCD3-217ENST00000488801 OR6X1Q8NH79 312 aa16.39■□□□□ 0.21
PTCD3-217ENST00000488801 MOSPD2Q8NHP6 518 aa16.39■□□□□ 0.21
PTCD3-217ENST00000488801 HIST1H2ACQ93077 130 aa16.39■□□□□ 0.21
PTCD3-217ENST00000488801 ADAD1Q96M93 576 aaKnown RBP16.39■□□□□ 0.21
PTCD3-217ENST00000488801 EMC6Q9BV81 110 aa16.39■□□□□ 0.21
PTCD3-217ENST00000488801 ZNF226Q9NYT6 803 aa16.39■□□□□ 0.21
PTCD3-217ENST00000488801 UPB1Q9UBR1 384 aa16.39■□□□□ 0.21
PTCD3-217ENST00000488801 RTTNQ86VV8 2226 aa16.39■□□□□ 0.21
PTCD3-217ENST00000488801 CCDC168Q8NDH2 2452 aa16.38■□□□□ 0.21
PTCD3-217ENST00000488801 A0A1W2PPR1 153 aa16.38■□□□□ 0.21
PTCD3-217ENST00000488801 EFCAB9A8MZ26 197 aa16.38■□□□□ 0.21
PTCD3-217ENST00000488801 ZNF587BE7ETH6 402 aa16.38■□□□□ 0.21
PTCD3-217ENST00000488801 BLOC1S5-TXNDC5H3BN57 136 aa16.38■□□□□ 0.21
PTCD3-217ENST00000488801 CLOCKO15516 846 aa16.38■□□□□ 0.21
PTCD3-217ENST00000488801 RNF13O43567 381 aa16.38■□□□□ 0.21
PTCD3-217ENST00000488801 RAD51DO75771 328 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms