RNA–Protein interactions for RNA: ENST00000488683.1

CLIC4-202, Transcript of chloride intracellular channel 4, humanhuman

TSL 2

Gene CLIC4, Length 2,723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-202ENST00000488683 MRM2Q9UI43 246 aaKnown RBP11.53□□□□□ -0.56
CLIC4-202ENST00000488683 ZNF337Q9Y3M9 751 aa11.53□□□□□ -0.56
CLIC4-202ENST00000488683 PCDHGA9Q9Y5G4 932 aaKnown RBP11.53□□□□□ -0.56
CLIC4-202ENST00000488683 IGHV3-20A0A0C4DH32 117 aa11.52□□□□□ -0.56
CLIC4-202ENST00000488683 C7orf66A4D0T2 115 aa11.52□□□□□ -0.56
CLIC4-202ENST00000488683 DHFRP00374 187 aa11.52□□□□□ -0.56
CLIC4-202ENST00000488683 SERPINA3P01011 423 aa11.52□□□□□ -0.56
CLIC4-202ENST00000488683 GUSBP08236 651 aa11.52□□□□□ -0.56
CLIC4-202ENST00000488683 ANXA7P20073 488 aaKnown RBP11.52□□□□□ -0.56
CLIC4-202ENST00000488683 ITPKBP27987 946 aa11.52□□□□□ -0.56
CLIC4-202ENST00000488683 RAD52P43351 418 aa11.52□□□□□ -0.56
CLIC4-202ENST00000488683 SMAD2Q15796 467 aaKnown RBP11.52□□□□□ -0.56
CLIC4-202ENST00000488683 GSG1Q2KHT4 349 aa11.52□□□□□ -0.56
CLIC4-202ENST00000488683 KLHL26Q53HC5 615 aa11.52□□□□□ -0.56
CLIC4-202ENST00000488683 KIAA0895LQ68EN5 471 aa11.52□□□□□ -0.56
CLIC4-202ENST00000488683 MARCH3Q86UD3 253 aa11.52□□□□□ -0.56
CLIC4-202ENST00000488683 SLITRK4Q8IW52 837 aa11.52□□□□□ -0.56
CLIC4-202ENST00000488683 ZNF595Q8IYB9 648 aa11.52□□□□□ -0.56
CLIC4-202ENST00000488683 PM20D2Q8IYS1 436 aa11.52□□□□□ -0.56
CLIC4-202ENST00000488683 PIAS4Q8N2W9 510 aaPredicted RBP11.52□□□□□ -0.56
CLIC4-202ENST00000488683 SYNPRQ8TBG9 265 aa11.52□□□□□ -0.56
CLIC4-202ENST00000488683 TAAR8Q969N4 342 aa11.52□□□□□ -0.56
CLIC4-202ENST00000488683 LPAR4Q99677 370 aa11.52□□□□□ -0.56
CLIC4-202ENST00000488683 C1QTNF6Q9BXI9 259 aa11.52□□□□□ -0.56
CLIC4-202ENST00000488683 GPR27Q9NS67 375 aa11.52□□□□□ -0.56
CLIC4-202ENST00000488683 ABRACLQ9P1F3 81 aa11.52□□□□□ -0.56
CLIC4-202ENST00000488683 SPATA2Q9UM82 520 aa11.52□□□□□ -0.56
CLIC4-202ENST00000488683 ARPC1BO15143 372 aaKnown RBP11.52□□□□□ -0.57
CLIC4-202ENST00000488683 ARPC3O15145 178 aa11.52□□□□□ -0.57
CLIC4-202ENST00000488683 ICOSLGO75144 302 aa11.52□□□□□ -0.57
CLIC4-202ENST00000488683 ARL6IP5O75915 188 aa11.52□□□□□ -0.57
CLIC4-202ENST00000488683 H2AFB2P0C5Z0 115 aa11.52□□□□□ -0.57
CLIC4-202ENST00000488683 EFNB2P52799 333 aa11.52□□□□□ -0.57
CLIC4-202ENST00000488683 GUCA2AQ02747 115 aa11.52□□□□□ -0.57
CLIC4-202ENST00000488683 RPL6Q02878 288 aaKnown RBP11.52□□□□□ -0.57
CLIC4-202ENST00000488683 RPL18Q07020 188 aaKnown RBP11.52□□□□□ -0.57
CLIC4-202ENST00000488683 GAS6Q14393 721 aa11.52□□□□□ -0.57
CLIC4-202ENST00000488683 ALG10Q5BKT4 473 aa11.52□□□□□ -0.57
CLIC4-202ENST00000488683 MESTQ5EB52 335 aa11.52□□□□□ -0.57
CLIC4-202ENST00000488683 BICRALQ6AI39 1079 aa11.52□□□□□ -0.57
CLIC4-202ENST00000488683 UNQ9370/PRO34162Q6UXP9 181 aa11.52□□□□□ -0.57
CLIC4-202ENST00000488683 JAZF1Q86VZ6 243 aa11.52□□□□□ -0.57
CLIC4-202ENST00000488683 GLB1L2Q8IW92 636 aa11.52□□□□□ -0.57
CLIC4-202ENST00000488683 SLC43A2Q8N370 569 aa11.52□□□□□ -0.57
CLIC4-202ENST00000488683 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.52□□□□□ -0.57
CLIC4-202ENST00000488683 THAP3Q8WTV1 239 aaPredicted RBP11.52□□□□□ -0.57
CLIC4-202ENST00000488683 METTL17Q9H7H0 456 aaPredicted RBP11.52□□□□□ -0.57
CLIC4-202ENST00000488683 EVA1AQ9H8M9 152 aa11.52□□□□□ -0.57
CLIC4-202ENST00000488683 OR5V1Q9UGF6 321 aa11.52□□□□□ -0.57
CLIC4-202ENST00000488683 KIF26BQ2KJY2 2108 aa11.52□□□□□ -0.57
CLIC4-202ENST00000488683 ZNF879B4DU55 563 aa11.51□□□□□ -0.57
CLIC4-202ENST00000488683 CDC40O60508 579 aaKnown RBP eCLIP11.51□□□□□ -0.57
CLIC4-202ENST00000488683 CFDP00746 253 aaPredicted RBP11.51□□□□□ -0.57
CLIC4-202ENST00000488683 CDK2P24941 298 aa11.51□□□□□ -0.57
CLIC4-202ENST00000488683 CD1CP29017 333 aa11.51□□□□□ -0.57
CLIC4-202ENST00000488683 TACR3P29371 465 aa11.51□□□□□ -0.57
CLIC4-202ENST00000488683 GABRA4P48169 554 aa11.51□□□□□ -0.57
CLIC4-202ENST00000488683 KLF9Q13886 244 aaPredicted RBP11.51□□□□□ -0.57
CLIC4-202ENST00000488683 ZNF684Q5T5D7 378 aa11.51□□□□□ -0.57
CLIC4-202ENST00000488683 SLC25A25Q6KCM7 469 aa11.51□□□□□ -0.57
CLIC4-202ENST00000488683 LRRN1Q6UXK5 716 aa11.51□□□□□ -0.57
CLIC4-202ENST00000488683 FAM122BQ7Z309 247 aa11.51□□□□□ -0.57
CLIC4-202ENST00000488683 TMPRSS12Q86WS5 348 aa11.51□□□□□ -0.57
CLIC4-202ENST00000488683 UXS1Q8NBZ7 420 aa11.51□□□□□ -0.57
CLIC4-202ENST00000488683 OR11G2Q8NGC1 345 aa11.51□□□□□ -0.57
CLIC4-202ENST00000488683 OR4D10Q8NGI6 311 aa11.51□□□□□ -0.57
CLIC4-202ENST00000488683 PTPMT1Q8WUK0 201 aaPredicted RBP11.51□□□□□ -0.57
CLIC4-202ENST00000488683 LRFN5Q96NI6 719 aa11.51□□□□□ -0.57
CLIC4-202ENST00000488683 TSPAN32Q96QS1 320 aa11.51□□□□□ -0.57
CLIC4-202ENST00000488683 C20orf85Q9H1P6 137 aa11.51□□□□□ -0.57
CLIC4-202ENST00000488683 CA10Q9NS85 328 aa11.51□□□□□ -0.57
CLIC4-202ENST00000488683 RXFP3Q9NSD7 469 aa11.51□□□□□ -0.57
CLIC4-202ENST00000488683 EIF3KQ9UBQ5 218 aaKnown RBP11.51□□□□□ -0.57
CLIC4-202ENST00000488683 MRPS33Q9Y291 106 aaKnown RBP11.51□□□□□ -0.57
CLIC4-202ENST00000488683 FER1L5A0AVI2 2057 aa11.51□□□□□ -0.57
CLIC4-202ENST00000488683 IFITM5A6NNB3 132 aa11.51□□□□□ -0.57
CLIC4-202ENST00000488683 CHURC1-FNTBB4DL54 471 aa11.51□□□□□ -0.57
CLIC4-202ENST00000488683 TNRC18O15417 2968 aaPredicted RBP11.51□□□□□ -0.57
CLIC4-202ENST00000488683 MPZL1O95297 269 aa11.51□□□□□ -0.57
CLIC4-202ENST00000488683 SIX6O95475 246 aa11.51□□□□□ -0.57
CLIC4-202ENST00000488683 NSA2O95478 260 aaKnown RBP11.51□□□□□ -0.57
CLIC4-202ENST00000488683 HLA-DQA2P01906 255 aa11.51□□□□□ -0.57
CLIC4-202ENST00000488683 IL11P20809 199 aa11.51□□□□□ -0.57
CLIC4-202ENST00000488683 GRK6P43250 576 aa11.51□□□□□ -0.57
CLIC4-202ENST00000488683 FNTBP49356 437 aa11.51□□□□□ -0.57
CLIC4-202ENST00000488683 ZNF81P51508 661 aa11.51□□□□□ -0.57
CLIC4-202ENST00000488683 FNDC7Q5VTL7 733 aa11.51□□□□□ -0.57
CLIC4-202ENST00000488683 MAMSTRQ6ZN01 415 aa11.51□□□□□ -0.57
CLIC4-202ENST00000488683 OVCH1Q7RTY7 1134 aa11.51□□□□□ -0.57
CLIC4-202ENST00000488683 ATG4DQ86TL0 474 aaPredicted RBP11.51□□□□□ -0.57
CLIC4-202ENST00000488683 LRRC75AQ8NAA5 344 aa11.51□□□□□ -0.57
CLIC4-202ENST00000488683 SLC38A3Q99624 504 aa11.51□□□□□ -0.57
CLIC4-202ENST00000488683 HRASLSQ9HDD0 168 aa11.51□□□□□ -0.57
CLIC4-202ENST00000488683 MSRAQ9UJ68 235 aa11.51□□□□□ -0.57
CLIC4-202ENST00000488683 KCNG2Q9UJ96 466 aa11.51□□□□□ -0.57
CLIC4-202ENST00000488683 PPIEQ9UNP9 301 aaKnown RBP11.51□□□□□ -0.57
CLIC4-202ENST00000488683 SLC22A13Q9Y226 551 aa11.51□□□□□ -0.57
CLIC4-202ENST00000488683 H0YIG0 161 aa11.51□□□□□ -0.57
CLIC4-202ENST00000488683 GPR171O14626 319 aa11.51□□□□□ -0.57
CLIC4-202ENST00000488683 HCRTR2O43614 444 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms