RNA–Protein interactions for RNA: ENST00000488627.5

CTDSP1-209, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 1,118 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-209ENST00000488627 PIK3C3Q8NEB9 887 aa13.95□□□□□ -0.18
CTDSP1-209ENST00000488627 MAGEE2Q8TD90 523 aaPredicted RBP13.95□□□□□ -0.18
CTDSP1-209ENST00000488627 TMEM239Q8WW34 195 aa13.95□□□□□ -0.18
CTDSP1-209ENST00000488627 LIPHQ8WWY8 451 aa13.95□□□□□ -0.18
CTDSP1-209ENST00000488627 LRR1Q96L50 414 aa13.95□□□□□ -0.18
CTDSP1-209ENST00000488627 PRRC1Q96M27 445 aa13.95□□□□□ -0.18
CTDSP1-209ENST00000488627 HS6ST2Q96MM7 605 aa13.95□□□□□ -0.18
CTDSP1-209ENST00000488627 TMUB1Q9BVT8 246 aa13.95□□□□□ -0.18
CTDSP1-209ENST00000488627 MAN2C1Q9NTJ4 1040 aa13.95□□□□□ -0.18
CTDSP1-209ENST00000488627 TAGLN3Q9UI15 199 aa13.95□□□□□ -0.18
CTDSP1-209ENST00000488627 C11orf98E9PRG8 122 aa13.94□□□□□ -0.18
CTDSP1-209ENST00000488627 J3KTA2 159 aa13.94□□□□□ -0.18
CTDSP1-209ENST00000488627 ABCD4O14678 606 aa13.94□□□□□ -0.18
CTDSP1-209ENST00000488627 DCTN3O75935 186 aa13.94□□□□□ -0.18
CTDSP1-209ENST00000488627 ZNF682O95780 498 aa13.94□□□□□ -0.18
CTDSP1-209ENST00000488627 SOD3P08294 240 aa13.94□□□□□ -0.18
CTDSP1-209ENST00000488627 TSPAN19P0C672 248 aa13.94□□□□□ -0.18
CTDSP1-209ENST00000488627 PTAFRP25105 342 aa13.94□□□□□ -0.18
CTDSP1-209ENST00000488627 YAP1P46937 504 aaKnown RBP13.94□□□□□ -0.18
CTDSP1-209ENST00000488627 ARF1P84077 181 aaKnown RBP13.94□□□□□ -0.18
CTDSP1-209ENST00000488627 ST3GAL3Q11203 375 aa13.94□□□□□ -0.18
CTDSP1-209ENST00000488627 PGGHGQ32M88 737 aa13.94□□□□□ -0.18
CTDSP1-209ENST00000488627 IFI44LQ53G44 452 aa13.94□□□□□ -0.18
CTDSP1-209ENST00000488627 CARD17Q5XLA6 110 aa13.94□□□□□ -0.18
CTDSP1-209ENST00000488627 HMBOX1Q6NT76 420 aa13.94□□□□□ -0.18
CTDSP1-209ENST00000488627 ANKRD16Q6P6B7 361 aa13.94□□□□□ -0.18
CTDSP1-209ENST00000488627 PGAM4Q8N0Y7 254 aa13.94□□□□□ -0.18
CTDSP1-209ENST00000488627 LRRC75A-AS1Q8N1F1 130 aa13.94□□□□□ -0.18
CTDSP1-209ENST00000488627 FITM2Q8N6M3 262 aa13.94□□□□□ -0.18
CTDSP1-209ENST00000488627 RNF148Q8N7C7 305 aa13.94□□□□□ -0.18
CTDSP1-209ENST00000488627 WFDC11Q8NEX6 87 aa13.94□□□□□ -0.18
CTDSP1-209ENST00000488627 GEMIN6Q8WXD5 167 aaKnown RBP13.94□□□□□ -0.18
CTDSP1-209ENST00000488627 HSH2DQ96JZ2 352 aa13.94□□□□□ -0.18
CTDSP1-209ENST00000488627 TEP1Q99973 2627 aaKnown RBP13.94□□□□□ -0.18
CTDSP1-209ENST00000488627 CRLF2Q9HC73 371 aa13.94□□□□□ -0.18
CTDSP1-209ENST00000488627 OBP2BQ9NPH6 170 aa13.94□□□□□ -0.18
CTDSP1-209ENST00000488627 ADA2Q9NZK5 511 aa13.94□□□□□ -0.18
CTDSP1-209ENST00000488627 CD300AQ9UGN4 299 aa13.94□□□□□ -0.18
CTDSP1-209ENST00000488627 EGFL7Q9UHF1 273 aa13.94□□□□□ -0.18
CTDSP1-209ENST00000488627 ITPR3Q14573 2671 aa13.93□□□□□ -0.18
CTDSP1-209ENST00000488627 ARPC4-TTLL3A0A0A6YYG9 625 aa13.93□□□□□ -0.18
CTDSP1-209ENST00000488627 M0R3G1 203 aa13.93□□□□□ -0.18
CTDSP1-209ENST00000488627 AKAP8O43823 692 aaKnown RBP13.93□□□□□ -0.18
CTDSP1-209ENST00000488627 SMPD2O60906 423 aa13.93□□□□□ -0.18
CTDSP1-209ENST00000488627 OR7A10O76100 309 aa13.93□□□□□ -0.18
CTDSP1-209ENST00000488627 IFNW1P05000 195 aa13.93□□□□□ -0.18
CTDSP1-209ENST00000488627 HOXB1P14653 301 aaPredicted RBP13.93□□□□□ -0.18
CTDSP1-209ENST00000488627 IFNGR1P15260 489 aa13.93□□□□□ -0.18
CTDSP1-209ENST00000488627 PAX1P15863 534 aa13.93□□□□□ -0.18
CTDSP1-209ENST00000488627 FUT1P19526 365 aa13.93□□□□□ -0.18
CTDSP1-209ENST00000488627 SH3BGRP55822 239 aaPredicted RBP13.93□□□□□ -0.18
CTDSP1-209ENST00000488627 NKX6-1P78426 367 aaPredicted RBP13.93□□□□□ -0.18
CTDSP1-209ENST00000488627 SPOCK1Q08629 439 aa13.93□□□□□ -0.18
CTDSP1-209ENST00000488627 FOXD4Q12950 439 aaPredicted RBP13.93□□□□□ -0.18
CTDSP1-209ENST00000488627 CEACAM16Q2WEN9 425 aa13.93□□□□□ -0.18
CTDSP1-209ENST00000488627 GLYATQ6IB77 296 aa13.93□□□□□ -0.18
CTDSP1-209ENST00000488627 KLHL17Q6TDP4 642 aa13.93□□□□□ -0.18
CTDSP1-209ENST00000488627 OFCC1Q8IZS5 231 aa13.93□□□□□ -0.18
CTDSP1-209ENST00000488627 GPR137CQ8N3F9 429 aa13.93□□□□□ -0.18
CTDSP1-209ENST00000488627 FAM156AQ8NDB6 213 aa13.93□□□□□ -0.18
CTDSP1-209ENST00000488627 RBM15BQ8NDT2 890 aaKnown RBP13.93□□□□□ -0.18
CTDSP1-209ENST00000488627 OR6X1Q8NH79 312 aa13.93□□□□□ -0.18
CTDSP1-209ENST00000488627 SMAP2Q8WU79 429 aaPredicted RBP13.93□□□□□ -0.18
CTDSP1-209ENST00000488627 FBXW5Q969U6 566 aa13.93□□□□□ -0.18
CTDSP1-209ENST00000488627 SGTBQ96EQ0 304 aa13.93□□□□□ -0.18
CTDSP1-209ENST00000488627 RADILQ96JH8 1075 aa13.93□□□□□ -0.18
CTDSP1-209ENST00000488627 DCAF13Q9NV06 445 aaKnown RBP13.93□□□□□ -0.18
CTDSP1-209ENST00000488627 ZNF701Q9NV72 531 aaPredicted RBP13.93□□□□□ -0.18
CTDSP1-209ENST00000488627 MGAT4BQ9UQ53 548 aa13.93□□□□□ -0.18
CTDSP1-209ENST00000488627 MED31Q9Y3C7 131 aa13.93□□□□□ -0.18
CTDSP1-209ENST00000488627 RAI1Q7Z5J4 1906 aaPredicted RBP13.93□□□□□ -0.18
CTDSP1-209ENST00000488627 ZNF469Q96JG9 3925 aaPredicted RBP13.93□□□□□ -0.18
CTDSP1-209ENST00000488627 A0A096LPE4 126 aa13.92□□□□□ -0.18
CTDSP1-209ENST00000488627 A0A1W2PPZ6 126 aa13.92□□□□□ -0.18
CTDSP1-209ENST00000488627 ZNF726A6NNF4 738 aa13.92□□□□□ -0.18
CTDSP1-209ENST00000488627 E7EQL1 145 aa13.92□□□□□ -0.18
CTDSP1-209ENST00000488627 M0R1B8 84 aa13.92□□□□□ -0.18
CTDSP1-209ENST00000488627 OVOL3O00110 214 aa13.92□□□□□ -0.18
CTDSP1-209ENST00000488627 PIP5K1CO60331 668 aa13.92□□□□□ -0.18
CTDSP1-209ENST00000488627 TMCC2O75069 709 aa13.92□□□□□ -0.18
CTDSP1-209ENST00000488627 SERPINI2O75830 405 aa13.92□□□□□ -0.18
CTDSP1-209ENST00000488627 OR6A2O95222 327 aa13.92□□□□□ -0.18
CTDSP1-209ENST00000488627 FAM107AO95990 144 aa13.92□□□□□ -0.18
CTDSP1-209ENST00000488627 WNT11O96014 354 aa13.92□□□□□ -0.18
CTDSP1-209ENST00000488627 HIST1H2ABP04908 130 aa13.92□□□□□ -0.18
CTDSP1-209ENST00000488627 HSD17B1P14061 328 aa13.92□□□□□ -0.18
CTDSP1-209ENST00000488627 BIDP55957 195 aa13.92□□□□□ -0.18
CTDSP1-209ENST00000488627 CAMK2DQ13557 499 aa13.92□□□□□ -0.18
CTDSP1-209ENST00000488627 KRT72Q14CN4 511 aa13.92□□□□□ -0.18
CTDSP1-209ENST00000488627 FKBP9P1Q75LS8 142 aa13.92□□□□□ -0.18
CTDSP1-209ENST00000488627 SLC35D2Q76EJ3 337 aa13.92□□□□□ -0.18
CTDSP1-209ENST00000488627 HIST3H2AQ7L7L0 130 aa13.92□□□□□ -0.18
CTDSP1-209ENST00000488627 ZNF627Q7L945 461 aa13.92□□□□□ -0.18
CTDSP1-209ENST00000488627 FAM86B1Q8N7N1 296 aa13.92□□□□□ -0.18
CTDSP1-209ENST00000488627 HIST1H2ACQ93077 130 aa13.92□□□□□ -0.18
CTDSP1-209ENST00000488627 TMEM54Q969K7 222 aa13.92□□□□□ -0.18
CTDSP1-209ENST00000488627 FAM162AQ96A26 154 aa13.92□□□□□ -0.18
CTDSP1-209ENST00000488627 GSX2Q9BZM3 304 aa13.92□□□□□ -0.18
CTDSP1-209ENST00000488627 GORASP2Q9H8Y8 452 aa13.92□□□□□ -0.18
CTDSP1-209ENST00000488627 CISD1Q9NZ45 108 aaKnown RBP13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms