RNA–Protein interactions for RNA: ENST00000488489.5

NECAB3-213, Transcript of N-terminal EF-hand calcium binding protein 3, humanhuman

TSL 2

Gene NECAB3, Length 2,142 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAB3-213ENST00000488489 TSPAN32Q96QS1 320 aa18.25■□□□□ 0.51
NECAB3-213ENST00000488489 TIMP4Q99727 224 aa18.25■□□□□ 0.51
NECAB3-213ENST00000488489 NMNAT2Q9BZQ4 307 aa18.25■□□□□ 0.51
NECAB3-213ENST00000488489 ASB6Q9NWX5 421 aa18.25■□□□□ 0.51
NECAB3-213ENST00000488489 ANKRD10Q9NXR5 420 aa18.25■□□□□ 0.51
NECAB3-213ENST00000488489 C12orf71A8MTZ7 269 aa18.24■□□□□ 0.51
NECAB3-213ENST00000488489 LALBAP00709 142 aa18.24■□□□□ 0.51
NECAB3-213ENST00000488489 APEHP13798 732 aaKnown RBP18.24■□□□□ 0.51
NECAB3-213ENST00000488489 SDHAP31040 664 aa18.24■□□□□ 0.51
NECAB3-213ENST00000488489 LIPKQ5VXJ0 399 aa18.24■□□□□ 0.51
NECAB3-213ENST00000488489 H3F3CQ6NXT2 135 aa18.24■□□□□ 0.51
NECAB3-213ENST00000488489 LSM14AQ8ND56 463 aaKnown RBP18.24■□□□□ 0.51
NECAB3-213ENST00000488489 ATP6V1C2Q8NEY4 427 aa18.24■□□□□ 0.51
NECAB3-213ENST00000488489 OR5M1Q8NGP8 315 aa18.24■□□□□ 0.51
NECAB3-213ENST00000488489 NTNG2Q96CW9 530 aa18.24■□□□□ 0.51
NECAB3-213ENST00000488489 ZNF486Q96H40 463 aaPredicted RBP18.24■□□□□ 0.51
NECAB3-213ENST00000488489 TBX5Q99593 518 aa18.24■□□□□ 0.51
NECAB3-213ENST00000488489 HPF1Q9NWY4 346 aa18.24■□□□□ 0.51
NECAB3-213ENST00000488489 HAO2Q9NYQ3 351 aa18.24■□□□□ 0.51
NECAB3-213ENST00000488489 IL17BQ9UHF5 180 aa18.24■□□□□ 0.51
NECAB3-213ENST00000488489 C11orf98E9PRG8 122 aa18.23■□□□□ 0.51
NECAB3-213ENST00000488489 STMND1H3BQB6 276 aa18.23■□□□□ 0.51
NECAB3-213ENST00000488489 AHSA1O95433 338 aa18.23■□□□□ 0.51
NECAB3-213ENST00000488489 SERPINA7P05543 415 aa18.23■□□□□ 0.51
NECAB3-213ENST00000488489 SBK2P0C263 348 aa18.23■□□□□ 0.51
NECAB3-213ENST00000488489 SF3B4Q15427 424 aaKnown RBP eCLIP18.23■□□□□ 0.514e-7■■■■■ 28.6
NECAB3-213ENST00000488489 SGCBQ16585 318 aa18.23■□□□□ 0.51
NECAB3-213ENST00000488489 ARMC4Q5T2S8 1044 aa18.23■□□□□ 0.51
NECAB3-213ENST00000488489 LEG1Q6P5S2 330 aa18.23■□□□□ 0.51
NECAB3-213ENST00000488489 GDPGP1Q6ZNW5 385 aa18.23■□□□□ 0.51
NECAB3-213ENST00000488489 SPATC1Q76KD6 591 aa18.23■□□□□ 0.51
NECAB3-213ENST00000488489 PHC2Q8IXK0 858 aa18.23■□□□□ 0.51
NECAB3-213ENST00000488489 ACBD7Q8N6N7 88 aa18.23■□□□□ 0.51
NECAB3-213ENST00000488489 OR5J2Q8NH18 312 aa18.23■□□□□ 0.51
NECAB3-213ENST00000488489 SETD6Q8TBK2 473 aa18.23■□□□□ 0.51
NECAB3-213ENST00000488489 PSMF1Q92530 271 aa18.23■□□□□ 0.51
NECAB3-213ENST00000488489 ZMYND19Q96E35 227 aaPredicted RBP18.23■□□□□ 0.51
NECAB3-213ENST00000488489 C1GALT1C1Q96EU7 318 aa18.23■□□□□ 0.51
NECAB3-213ENST00000488489 MRGPRX4Q96LA9 322 aa18.23■□□□□ 0.51
NECAB3-213ENST00000488489 ARHGAP9Q9BRR9 750 aa18.23■□□□□ 0.51
NECAB3-213ENST00000488489 ASPNQ9BXN1 380 aa18.23■□□□□ 0.51
NECAB3-213ENST00000488489 ANGPTL4Q9BY76 406 aa18.23■□□□□ 0.51
NECAB3-213ENST00000488489 G3V3Y1 287 aa18.23■□□□□ 0.51
NECAB3-213ENST00000488489 SSX4O60224 188 aa18.23■□□□□ 0.51
NECAB3-213ENST00000488489 DXOO77932 396 aaKnown RBP18.23■□□□□ 0.51
NECAB3-213ENST00000488489 TXNDC12O95881 172 aa18.23■□□□□ 0.51
NECAB3-213ENST00000488489 TNFSF8P32971 234 aa18.23■□□□□ 0.51
NECAB3-213ENST00000488489 NDUFA5Q16718 116 aa18.23■□□□□ 0.51
NECAB3-213ENST00000488489 SLC22A10Q63ZE4 541 aa18.23■□□□□ 0.51
NECAB3-213ENST00000488489 C14orf119Q9NWQ9 140 aa18.23■□□□□ 0.51
NECAB3-213ENST00000488489 ZNF346Q9UL40 294 aaKnown RBP18.23■□□□□ 0.51
NECAB3-213ENST00000488489 TBC1D24Q9ULP9 559 aa18.23■□□□□ 0.51
NECAB3-213ENST00000488489 SLC6A5Q9Y345 797 aa18.23■□□□□ 0.51
NECAB3-213ENST00000488489 OR2T1O43869 369 aa18.22■□□□□ 0.51
NECAB3-213ENST00000488489 SPI1P17947 270 aa18.22■□□□□ 0.51
NECAB3-213ENST00000488489 NR4A2P43354 598 aa18.22■□□□□ 0.51
NECAB3-213ENST00000488489 NKX2-5P52952 324 aaPredicted RBP18.22■□□□□ 0.51
NECAB3-213ENST00000488489 IFITM2Q01629 132 aa18.22■□□□□ 0.51
NECAB3-213ENST00000488489 MESTQ5EB52 335 aa18.22■□□□□ 0.51
NECAB3-213ENST00000488489 C5orf46Q6UWT4 87 aa18.22■□□□□ 0.51
NECAB3-213ENST00000488489 OR10H4Q8NGA5 316 aa18.22■□□□□ 0.51
NECAB3-213ENST00000488489 ZNF417Q8TAU3 575 aa18.22■□□□□ 0.51
NECAB3-213ENST00000488489 ADAMTS17Q8TE56 1095 aa18.22■□□□□ 0.51
NECAB3-213ENST00000488489 TSSK2Q96PF2 358 aa18.22■□□□□ 0.51
NECAB3-213ENST00000488489 ZNF587Q96SQ5 575 aaPredicted RBP18.22■□□□□ 0.51
NECAB3-213ENST00000488489 ISG20L2Q9H9L3 353 aaKnown RBP18.22■□□□□ 0.51
NECAB3-213ENST00000488489 NEK6Q9HC98 313 aa18.22■□□□□ 0.51
NECAB3-213ENST00000488489 NDUFB11Q9NX14 153 aa18.22■□□□□ 0.51
NECAB3-213ENST00000488489 GRHPRQ9UBQ7 328 aa18.22■□□□□ 0.51
NECAB3-213ENST00000488489 SPIN1Q9Y657 262 aaPredicted RBP18.22■□□□□ 0.51
NECAB3-213ENST00000488489 H3BML4 177 aa18.22■□□□□ 0.51
NECAB3-213ENST00000488489 LRRTM2O43300 516 aa18.22■□□□□ 0.51
NECAB3-213ENST00000488489 ZNF208O43345 1280 aa18.22■□□□□ 0.51
NECAB3-213ENST00000488489 CCNKO75909 580 aa18.22■□□□□ 0.51
NECAB3-213ENST00000488489 S100A1P23297 94 aa18.22■□□□□ 0.51
NECAB3-213ENST00000488489 AHCYP23526 432 aa18.22■□□□□ 0.51
NECAB3-213ENST00000488489 ACER2Q5QJU3 275 aa18.22■□□□□ 0.51
NECAB3-213ENST00000488489 RSBN1Q5VWQ0 802 aaPredicted RBP18.22■□□□□ 0.51
NECAB3-213ENST00000488489 PLCZ1Q86YW0 608 aa18.22■□□□□ 0.51
NECAB3-213ENST00000488489 OR4K17Q8NGC6 315 aa18.22■□□□□ 0.51
NECAB3-213ENST00000488489 NKD1Q969G9 470 aa18.22■□□□□ 0.51
NECAB3-213ENST00000488489 PRRX2Q99811 253 aa18.22■□□□□ 0.51
NECAB3-213ENST00000488489 BARHL1Q9BZE3 327 aa18.22■□□□□ 0.51
NECAB3-213ENST00000488489 EXOSC4Q9NPD3 245 aaKnown RBP18.22■□□□□ 0.51
NECAB3-213ENST00000488489 MED13Q9UHV7 2174 aa18.21■□□□□ 0.51
NECAB3-213ENST00000488489 H7C1C5 153 aa18.21■□□□□ 0.51
NECAB3-213ENST00000488489 PLPP3O14495 311 aa18.21■□□□□ 0.51
NECAB3-213ENST00000488489 PLGP00747 810 aaPredicted RBP18.21■□□□□ 0.51
NECAB3-213ENST00000488489 CPEP16870 476 aa18.21■□□□□ 0.51
NECAB3-213ENST00000488489 RCVRNP35243 200 aa18.21■□□□□ 0.51
NECAB3-213ENST00000488489 RPS19P39019 145 aaKnown RBP18.21■□□□□ 0.51
NECAB3-213ENST00000488489 HCCSP53701 268 aa18.21■□□□□ 0.51
NECAB3-213ENST00000488489 LCN6P62502 163 aa18.21■□□□□ 0.51
NECAB3-213ENST00000488489 GABREP78334 506 aa18.21■□□□□ 0.51
NECAB3-213ENST00000488489 C19orf57Q0VDD7 668 aa18.21■□□□□ 0.51
NECAB3-213ENST00000488489 ZNF544Q6NX49 715 aa18.21■□□□□ 0.51
NECAB3-213ENST00000488489 ZNF322Q6U7Q0 402 aaPredicted RBP18.21■□□□□ 0.51
NECAB3-213ENST00000488489 LYPD4Q6UWN0 246 aa18.21■□□□□ 0.51
NECAB3-213ENST00000488489 DND1Q8IYX4 353 aaKnown RBP18.21■□□□□ 0.51
NECAB3-213ENST00000488489 SLC7A5P1Q8MH63 180 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms