RNA–Protein interactions for RNA: ENST00000488017.1

SMC4-220, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 4

Gene SMC4, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-220ENST00000488017 IGLV3-22A0A075B6J6 115 aa1.27□□□□□ -2.21
SMC4-220ENST00000488017 IGLV2-18A0A075B6J9 118 aa1.27□□□□□ -2.21
SMC4-220ENST00000488017 A8MXQ7 604 aa1.27□□□□□ -2.21
SMC4-220ENST00000488017 C12orf77C9JDV5 145 aa1.27□□□□□ -2.21
SMC4-220ENST00000488017 LOC110117498-PIK3R3F6TDL0 507 aa1.27□□□□□ -2.21
SMC4-220ENST00000488017 POLR2DO15514 142 aaKnown RBP1.27□□□□□ -2.21
SMC4-220ENST00000488017 PRKAB2O43741 272 aa1.27□□□□□ -2.21
SMC4-220ENST00000488017 RAMP3O60896 148 aa1.27□□□□□ -2.21
SMC4-220ENST00000488017 SNNO75324 88 aaPredicted RBP1.27□□□□□ -2.21
SMC4-220ENST00000488017 CISD3P0C7P0 127 aa1.27□□□□□ -2.21
SMC4-220ENST00000488017 HSMCR30P0CW71 290 aa1.27□□□□□ -2.21
SMC4-220ENST00000488017 TDGF1P13385 188 aa1.27□□□□□ -2.21
SMC4-220ENST00000488017 POU2F1P14859 743 aa1.27□□□□□ -2.21
SMC4-220ENST00000488017 CCR1P32246 355 aa1.27□□□□□ -2.21
SMC4-220ENST00000488017 TDGF1P3P51864 188 aa1.27□□□□□ -2.21
SMC4-220ENST00000488017 ACVR1Q04771 509 aa1.27□□□□□ -2.21
SMC4-220ENST00000488017 ASPHQ12797 758 aa1.27□□□□□ -2.21
SMC4-220ENST00000488017 ABCA11PQ4W5N1 156 aa1.27□□□□□ -2.21
SMC4-220ENST00000488017 SFT2D3Q587I9 215 aa1.27□□□□□ -2.21
SMC4-220ENST00000488017 LRRC10Q5BKY1 277 aa1.27□□□□□ -2.21
SMC4-220ENST00000488017 CFAP157Q5JU67 520 aa1.27□□□□□ -2.21
SMC4-220ENST00000488017 PDZK1Q5T2W1 519 aa1.27□□□□□ -2.21
SMC4-220ENST00000488017 GALNT17Q6IS24 598 aa1.27□□□□□ -2.21
SMC4-220ENST00000488017 UQCC3Q6UW78 93 aa1.27□□□□□ -2.21
SMC4-220ENST00000488017 HMGN2P46Q86SG4 172 aa1.27□□□□□ -2.21
SMC4-220ENST00000488017 DHDDSQ86SQ9 333 aa1.27□□□□□ -2.21
SMC4-220ENST00000488017 ZNF546Q86UE3 836 aa1.27□□□□□ -2.21
SMC4-220ENST00000488017 ACOT4Q8N9L9 421 aa1.27□□□□□ -2.21
SMC4-220ENST00000488017 MFSD9Q8NBP5 474 aa1.27□□□□□ -2.21
SMC4-220ENST00000488017 OR4F15Q8NGB8 312 aa1.27□□□□□ -2.21
SMC4-220ENST00000488017 DTX3LQ8TDB6 740 aa1.27□□□□□ -2.21
SMC4-220ENST00000488017 RLN3Q8WXF3 142 aa1.27□□□□□ -2.21
SMC4-220ENST00000488017 TM4SF19Q96DZ7 209 aa1.27□□□□□ -2.21
SMC4-220ENST00000488017 RBM14Q96PK6 669 aaKnown RBP1.27□□□□□ -2.21
SMC4-220ENST00000488017 CLCC1Q96S66 551 aa1.27□□□□□ -2.21
SMC4-220ENST00000488017 NPAS2Q99743 824 aa1.27□□□□□ -2.21
SMC4-220ENST00000488017 RIOK2Q9BVS4 552 aaKnown RBP1.27□□□□□ -2.21
SMC4-220ENST00000488017 CDC42EP4Q9H3Q1 356 aaKnown RBP1.27□□□□□ -2.21
SMC4-220ENST00000488017 SRMSQ9H3Y6 488 aa1.27□□□□□ -2.21
SMC4-220ENST00000488017 YY1AP1Q9H869 796 aa1.27□□□□□ -2.21
SMC4-220ENST00000488017 NHEJ1Q9H9Q4 299 aaPredicted RBP1.27□□□□□ -2.21
SMC4-220ENST00000488017 KCNIP1Q9NZI2 227 aa1.27□□□□□ -2.21
SMC4-220ENST00000488017 OPN4Q9UHM6 478 aa1.27□□□□□ -2.21
SMC4-220ENST00000488017 GNPTGQ9UJJ9 305 aa1.27□□□□□ -2.21
SMC4-220ENST00000488017 MMP17Q9ULZ9 603 aa1.27□□□□□ -2.21
SMC4-220ENST00000488017 ATP6V0A2Q9Y487 856 aa1.27□□□□□ -2.21
SMC4-220ENST00000488017 SLC25A15Q9Y619 301 aa1.27□□□□□ -2.21
SMC4-220ENST00000488017 IGLV11-55A0A075B6I3 123 aa1.26□□□□□ -2.21
SMC4-220ENST00000488017 OR5B21A6NL26 309 aa1.26□□□□□ -2.21
SMC4-220ENST00000488017 H0YCG3 227 aa1.26□□□□□ -2.21
SMC4-220ENST00000488017 NDC80O14777 642 aa1.26□□□□□ -2.21
SMC4-220ENST00000488017 MAGEB3O15480 346 aa1.26□□□□□ -2.21
SMC4-220ENST00000488017 MED7O43513 233 aa1.26□□□□□ -2.21
SMC4-220ENST00000488017 GMFGO60234 142 aa1.26□□□□□ -2.21
SMC4-220ENST00000488017 TOM1O60784 492 aa1.26□□□□□ -2.21
SMC4-220ENST00000488017 SS18L1O75177 396 aaPredicted RBP1.26□□□□□ -2.21
SMC4-220ENST00000488017 SUPT3HO75486 399 aa1.26□□□□□ -2.21
SMC4-220ENST00000488017 CNR1P21554 472 aa1.26□□□□□ -2.21
SMC4-220ENST00000488017 IFNAR2P48551 515 aa1.26□□□□□ -2.21
SMC4-220ENST00000488017 DUSP3P51452 185 aaPredicted RBP1.26□□□□□ -2.21
SMC4-220ENST00000488017 IRX3P78415 501 aaPredicted RBP1.26□□□□□ -2.21
SMC4-220ENST00000488017 CDK16Q00536 496 aa1.26□□□□□ -2.21
SMC4-220ENST00000488017 SPIBQ01892 262 aa1.26□□□□□ -2.21
SMC4-220ENST00000488017 ENPEPQ07075 957 aa1.26□□□□□ -2.21
SMC4-220ENST00000488017 OR5I1Q13606 314 aa1.26□□□□□ -2.21
SMC4-220ENST00000488017 FZD2Q14332 565 aa1.26□□□□□ -2.21
SMC4-220ENST00000488017 GUCA2BQ16661 112 aa1.26□□□□□ -2.21
SMC4-220ENST00000488017 TMEM183BQ1AE95 376 aa1.26□□□□□ -2.21
SMC4-220ENST00000488017 KLHL38Q2WGJ6 581 aa1.26□□□□□ -2.21
SMC4-220ENST00000488017 RFX4Q33E94 735 aa1.26□□□□□ -2.21
SMC4-220ENST00000488017 ATAD3BQ5T9A4 648 aa1.26□□□□□ -2.21
SMC4-220ENST00000488017 NLRP9Q7RTR0 991 aa1.26□□□□□ -2.21
SMC4-220ENST00000488017 PCP2Q8IVA1 136 aa1.26□□□□□ -2.21
SMC4-220ENST00000488017 TMEM183AQ8IXX5 376 aa1.26□□□□□ -2.21
SMC4-220ENST00000488017 PIANPQ8IYJ0 282 aa1.26□□□□□ -2.21
SMC4-220ENST00000488017 TEX9Q8N6V9 391 aa1.26□□□□□ -2.21
SMC4-220ENST00000488017 ZNF709Q8N972 641 aa1.26□□□□□ -2.21
SMC4-220ENST00000488017 CCDC54Q8NEL0 328 aa1.26□□□□□ -2.21
SMC4-220ENST00000488017 OR10G9Q8NGN4 311 aa1.26□□□□□ -2.21
SMC4-220ENST00000488017 MAGEE2Q8TD90 523 aaPredicted RBP1.26□□□□□ -2.21
SMC4-220ENST00000488017 SCFD1Q8WVM8 642 aa1.26□□□□□ -2.21
SMC4-220ENST00000488017 ACOT11Q8WXI4 607 aaPredicted RBP1.26□□□□□ -2.21
SMC4-220ENST00000488017 RSPH1Q8WYR4 309 aa1.26□□□□□ -2.21
SMC4-220ENST00000488017 FGF14Q92915 247 aa1.26□□□□□ -2.21
SMC4-220ENST00000488017 TBRG4Q969Z0 631 aaKnown RBP eCLIP1.26□□□□□ -2.21
SMC4-220ENST00000488017 LRRC58Q96CX6 371 aa1.26□□□□□ -2.21
SMC4-220ENST00000488017 CXorf40BQ96DE9 158 aa1.26□□□□□ -2.21
SMC4-220ENST00000488017 MTMR9Q96QG7 549 aa1.26□□□□□ -2.21
SMC4-220ENST00000488017 TAAR1Q96RJ0 339 aa1.26□□□□□ -2.21
SMC4-220ENST00000488017 ZNF2Q9BSG1 426 aaPredicted RBP1.26□□□□□ -2.21
SMC4-220ENST00000488017 DEFB127Q9H1M4 99 aa1.26□□□□□ -2.21
SMC4-220ENST00000488017 GORASP2Q9H8Y8 452 aa1.26□□□□□ -2.21
SMC4-220ENST00000488017 LY9Q9HBG7 655 aa1.26□□□□□ -2.21
SMC4-220ENST00000488017 IL26Q9NPH9 171 aa1.26□□□□□ -2.21
SMC4-220ENST00000488017 GIN1Q9NXP7 522 aa1.26□□□□□ -2.21
SMC4-220ENST00000488017 CALYQ9NYX4 217 aa1.26□□□□□ -2.21
SMC4-220ENST00000488017 SPATA7Q9P0W8 599 aa1.26□□□□□ -2.21
SMC4-220ENST00000488017 EPS15L1Q9UBC2 864 aa1.26□□□□□ -2.21
SMC4-220ENST00000488017 TMCO1Q9UM00 188 aa1.26□□□□□ -2.21
SMC4-220ENST00000488017 KCNIP3Q9Y2W7 256 aa1.26□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms