RNA–Protein interactions for RNA: ENST00000487939.1

PTEN-204, Transcript of phosphatase and tensin homolog, humanhuman

TSL 3

Gene PTEN, Length 477 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTEN-204ENST00000487939 ACTRT1Q8TDG2 376 aa2.54□□□□□ -2
PTEN-204ENST00000487939 PYROXD1Q8WU10 500 aa2.54□□□□□ -2
PTEN-204ENST00000487939 TTC25Q96NG3 672 aa2.54□□□□□ -2
PTEN-204ENST00000487939 PARD6BQ9BYG5 372 aa2.54□□□□□ -2
PTEN-204ENST00000487939 YY1AP1Q9H869 796 aa2.54□□□□□ -2
PTEN-204ENST00000487939 XCL2Q9UBD3 114 aa2.54□□□□□ -2
PTEN-204ENST00000487939 ZNF282Q9UDV7 671 aaPredicted RBP2.54□□□□□ -2
PTEN-204ENST00000487939 MMP17Q9ULZ9 603 aa2.54□□□□□ -2
PTEN-204ENST00000487939 MROH7-TTC4A0A0A0MT08 1334 aa2.53□□□□□ -2
PTEN-204ENST00000487939 SERPINE3A8MV23 424 aa2.53□□□□□ -2
PTEN-204ENST00000487939 MAGEB3O15480 346 aa2.53□□□□□ -2
PTEN-204ENST00000487939 IGLV2-23P01705 113 aa2.53□□□□□ -2
PTEN-204ENST00000487939 IGHV3-43DP0DP04 118 aa2.53□□□□□ -2
PTEN-204ENST00000487939 CNR1P21554 472 aa2.53□□□□□ -2
PTEN-204ENST00000487939 OMGP23515 440 aa2.53□□□□□ -2
PTEN-204ENST00000487939 OPRD1P41143 372 aa2.53□□□□□ -2
PTEN-204ENST00000487939 SSR1P43307 286 aaKnown RBP2.53□□□□□ -2
PTEN-204ENST00000487939 DUSP3P51452 185 aaPredicted RBP2.53□□□□□ -2
PTEN-204ENST00000487939 GNMTQ14749 295 aa2.53□□□□□ -2
PTEN-204ENST00000487939 GUCA2BQ16661 112 aa2.53□□□□□ -2
PTEN-204ENST00000487939 RSPO1Q2MKA7 263 aaPredicted RBP2.53□□□□□ -2
PTEN-204ENST00000487939 FILIP1LQ4L180 1135 aa2.53□□□□□ -2
PTEN-204ENST00000487939 LINC00483Q53H64 154 aa2.53□□□□□ -2
PTEN-204ENST00000487939 OR4F3Q6IEY1 312 aa2.53□□□□□ -2
PTEN-204ENST00000487939 LYPD2Q6UXB3 125 aa2.53□□□□□ -2
PTEN-204ENST00000487939 Q6ZPB1 254 aaPredicted RBP2.53□□□□□ -2
PTEN-204ENST00000487939 TRPV1Q8NER1 839 aa2.53□□□□□ -2
PTEN-204ENST00000487939 UBALD1Q8TB05 177 aa2.53□□□□□ -2
PTEN-204ENST00000487939 SMARCD2Q92925 531 aa2.53□□□□□ -2
PTEN-204ENST00000487939 DNAJC19Q96DA6 116 aa2.53□□□□□ -2
PTEN-204ENST00000487939 AURKBQ96GD4 344 aaPredicted RBP2.53□□□□□ -2
PTEN-204ENST00000487939 BMFQ96LC9 184 aa2.53□□□□□ -2
PTEN-204ENST00000487939 SLC38A2Q96QD8 506 aa2.53□□□□□ -2
PTEN-204ENST00000487939 CTRCQ99895 268 aa2.53□□□□□ -2
PTEN-204ENST00000487939 RSPO3Q9BXY4 272 aaPredicted RBP2.53□□□□□ -2
PTEN-204ENST00000487939 LY9Q9HBG7 655 aa2.53□□□□□ -2
PTEN-204ENST00000487939 SPATA7Q9P0W8 599 aa2.53□□□□□ -2
PTEN-204ENST00000487939 KCNIP3Q9Y2W7 256 aa2.53□□□□□ -2
PTEN-204ENST00000487939 FRMPD3Q5JV73 1810 aa2.53□□□□□ -2
PTEN-204ENST00000487939 PTCH1Q13635 1447 aa2.52□□□□□ -2.01
PTEN-204ENST00000487939 BET1O15155 118 aa2.52□□□□□ -2.01
PTEN-204ENST00000487939 B4GALT5O43286 388 aa2.52□□□□□ -2.01
PTEN-204ENST00000487939 TOM1O60784 492 aa2.52□□□□□ -2.01
PTEN-204ENST00000487939 BGLAPP02818 100 aa2.52□□□□□ -2.01
PTEN-204ENST00000487939 MRPL3P09001 348 aaKnown RBP2.52□□□□□ -2.01
PTEN-204ENST00000487939 SMIM10L1P0DMW3 83 aa2.52□□□□□ -2.01
PTEN-204ENST00000487939 TCN1P20061 433 aaPredicted RBP2.52□□□□□ -2.01
PTEN-204ENST00000487939 FGF8P55075 233 aaPredicted RBP2.52□□□□□ -2.01
PTEN-204ENST00000487939 KRTAP10-10P60014 251 aa2.52□□□□□ -2.01
PTEN-204ENST00000487939 REG3AQ06141 175 aa2.52□□□□□ -2.01
PTEN-204ENST00000487939 KLHL30Q0D2K2 578 aa2.52□□□□□ -2.01
PTEN-204ENST00000487939 FZD2Q14332 565 aa2.52□□□□□ -2.01
PTEN-204ENST00000487939 EXOC3L2Q2M3D2 409 aa2.52□□□□□ -2.01
PTEN-204ENST00000487939 ATAD3BQ5T9A4 648 aa2.52□□□□□ -2.01
PTEN-204ENST00000487939 ECHDC2Q86YB7 292 aa2.52□□□□□ -2.01
PTEN-204ENST00000487939 VSTM4Q8IW00 320 aa2.52□□□□□ -2.01
PTEN-204ENST00000487939 ZNF695Q8IW36 515 aa2.52□□□□□ -2.01
PTEN-204ENST00000487939 TTC5Q8N0Z6 440 aa2.52□□□□□ -2.01
PTEN-204ENST00000487939 TPRX1Q8N7U7 411 aa2.52□□□□□ -2.01
PTEN-204ENST00000487939 OR2T3Q8NH03 318 aa2.52□□□□□ -2.01
PTEN-204ENST00000487939 MAGEE2Q8TD90 523 aaPredicted RBP2.52□□□□□ -2.01
PTEN-204ENST00000487939 ZNF721Q8TF20 911 aa2.52□□□□□ -2.01
PTEN-204ENST00000487939 ZFP90Q8TF47 636 aa2.52□□□□□ -2.01
PTEN-204ENST00000487939 TBC1D31Q96DN5 1066 aa2.52□□□□□ -2.01
PTEN-204ENST00000487939 COQ2Q96H96 371 aa2.52□□□□□ -2.01
PTEN-204ENST00000487939 SMIM10Q96HG1 83 aa2.52□□□□□ -2.01
PTEN-204ENST00000487939 RPRD1AQ96P16 312 aaPredicted RBP2.52□□□□□ -2.01
PTEN-204ENST00000487939 SPIN2AQ99865 258 aa2.52□□□□□ -2.01
PTEN-204ENST00000487939 SPIN2BQ9BPZ2 258 aa2.52□□□□□ -2.01
PTEN-204ENST00000487939 SH3BGRL2Q9UJC5 107 aa2.52□□□□□ -2.01
PTEN-204ENST00000487939 GAKO14976 1311 aa2.51□□□□□ -2.01
PTEN-204ENST00000487939 PLAC8L1A1L4L8 177 aa2.51□□□□□ -2.01
PTEN-204ENST00000487939 GOLGA8SH3BPF8 625 aa2.51□□□□□ -2.01
PTEN-204ENST00000487939 NDC80O14777 642 aa2.51□□□□□ -2.01
PTEN-204ENST00000487939 CD5LO43866 347 aa2.51□□□□□ -2.01
PTEN-204ENST00000487939 MGRN1O60291 552 aa2.51□□□□□ -2.01
PTEN-204ENST00000487939 B4GALT2O60909 372 aa2.51□□□□□ -2.01
PTEN-204ENST00000487939 FOXH1O75593 365 aa2.51□□□□□ -2.01
PTEN-204ENST00000487939 UPK3AO75631 287 aa2.51□□□□□ -2.01
PTEN-204ENST00000487939 CTDNEP1O95476 244 aa2.51□□□□□ -2.01
PTEN-204ENST00000487939 CLDN9O95484 217 aa2.51□□□□□ -2.01
PTEN-204ENST00000487939 GUCA1CO95843 209 aa2.51□□□□□ -2.01
PTEN-204ENST00000487939 CISD3P0C7P0 127 aa2.51□□□□□ -2.01
PTEN-204ENST00000487939 UBTFL1P0CB47 393 aaPredicted RBP2.51□□□□□ -2.01
PTEN-204ENST00000487939 ZNF30P17039 623 aa2.51□□□□□ -2.01
PTEN-204ENST00000487939 SLC2A5P22732 501 aa2.51□□□□□ -2.01
PTEN-204ENST00000487939 FGL1Q08830 312 aa2.51□□□□□ -2.01
PTEN-204ENST00000487939 TTLL9Q3SXZ7 439 aa2.51□□□□□ -2.01
PTEN-204ENST00000487939 CFAP157Q5JU67 520 aa2.51□□□□□ -2.01
PTEN-204ENST00000487939 GET4Q7L5D6 327 aaPredicted RBP2.51□□□□□ -2.01
PTEN-204ENST00000487939 PEX26Q7Z412 305 aa2.51□□□□□ -2.01
PTEN-204ENST00000487939 THOC6Q86W42 341 aaKnown RBP2.51□□□□□ -2.01
PTEN-204ENST00000487939 PIANPQ8IYJ0 282 aa2.51□□□□□ -2.01
PTEN-204ENST00000487939 LYPD1Q8N2G4 141 aa2.51□□□□□ -2.01
PTEN-204ENST00000487939 ZADH2Q8N4Q0 377 aa2.51□□□□□ -2.01
PTEN-204ENST00000487939 ZNF641Q96N77 438 aaPredicted RBP2.51□□□□□ -2.01
PTEN-204ENST00000487939 COPS8Q99627 209 aa2.51□□□□□ -2.01
PTEN-204ENST00000487939 NDFIP1Q9BT67 221 aa2.51□□□□□ -2.01
PTEN-204ENST00000487939 LINC00597Q9H2U6 94 aa2.51□□□□□ -2.01
PTEN-204ENST00000487939 SLCO1B3Q9NPD5 702 aa2.51□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms